Cagra.3467s0056 (Capsella grandiflora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cagra.3467s0056 T196434_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3467s0056.1.p GATA 221 256

Links

Other GATA family TFs
Other Capsella grandiflora TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GATA22 Arabidopsis thaliana AT4G26150 N 0.867
GATA21 Arabidopsis thaliana AT5G56860 N 0.867
Bo1g042950 Brassica oleracea Bo1g042950 N 0.867
Bo2g033970 Brassica oleracea Bo2g033970 N 0.867
Bo7g110740 Brassica oleracea Bo7g110740 N 0.867
Bo9g127360 Brassica oleracea Bo9g127360 N 0.867
Bra002788 Brassica rapa Bra002788 N 0.867
Bra019118 Brassica rapa Bra019118 N 0.867
Bra026461 Brassica rapa Bra026461 N 0.867
Bra035633 Brassica rapa Bra035633 N 0.867
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.867
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.867
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.867
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.867
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.867
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.867
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.867
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.867
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.867
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.867
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.867
TCM_037285 Theobroma cacao TCM_037285 N 0.867
TCM_037666 Theobroma cacao TCM_037666 N 0.867
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.867
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.867
Pm027164 Prunus mume Pm027164 N 0.867
29794.m003323 Ricinus communis 29794.m003323 N 0.867
29912.m005322 Ricinus communis 29912.m005322 N 0.867
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.867
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.867
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.867
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.867
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.867
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.867
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.867
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.867
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.867
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.867
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.867
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.867
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.867
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.867
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.867
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.867
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.867
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.867
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.867
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.867
MDP0000131803 Malus domestica MDP0000131803 N 0.867
MDP0000190038 Malus domestica MDP0000190038 N 0.867
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.867
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.867
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.867
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.867
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.867
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.867
PK07593.1 Cannabis sativa PK07593.1 N 0.867
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.867
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.862
MDP0000237740 Malus domestica MDP0000237740 N 0.862
MDP0000739900 Malus domestica MDP0000739900 N 0.862
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.856
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.856
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.856
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.856
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.856
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.856
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.856
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.856
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.856
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.856
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.856
OB02G18010 Oryza brachyantha OB02G18010 N 0.856
OB06G26630 Oryza brachyantha OB06G26630 N 0.856
OBART02G08990 Oryza barthii OBART02G08990 N 0.856
OBART06G19060 Oryza barthii OBART06G19060 N 0.856
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.856
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.856
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.856
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.856
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.856
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.856
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.856
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.856
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.856
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.856
OS02G0220400 Oryza sativa OS02G0220400 N 0.856
OS06G0571800 Oryza sativa OS06G0571800 N 0.856
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.856
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.856
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.856
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.856
Si006733m.g Setaria italica Si006733m.g N 0.856
Si019058m.g Setaria italica Si019058m.g N 0.856
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.856
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.856
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.856
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.856
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.856
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.856
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.856
Cla021191 Citrullus lanatus Cla021191 N 0.856
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.856
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.856
mgf008387m Mimulus guttatus mgf008387m N 0.856
mgf025842m Mimulus guttatus mgf025842m N 0.856
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.856
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.856
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.856
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.856
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.851
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.851
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.851
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.851
Pm005502 Prunus mume Pm005502 N 0.851
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.851
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.842
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.837
Bo3g019610 Brassica oleracea Bo3g019610 I 0.836
Bra006851 Brassica rapa Bra006851 I 0.836
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.836
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.829
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.829
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.829
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.822
PK21934.1 Cannabis sativa PK21934.1 I 0.814
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.811
MDP0000309902 Malus domestica MDP0000309902 I 0.810
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.805