chr5.CM0019.380.nc (Lotus japonicus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 chr5.CM0019.380.nc T197039_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0019.380.nc GATA 175 210

Links

Other GATA family TFs
Other Lotus japonicus TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.862
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.856
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.856
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.856
MDP0000739900 Malus domestica MDP0000739900 N 0.856
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.851
GATA22 Arabidopsis thaliana AT4G26150 N 0.851
GATA21 Arabidopsis thaliana AT5G56860 N 0.851
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.851
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.851
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.851
Bo1g042950 Brassica oleracea Bo1g042950 N 0.851
Bo2g033970 Brassica oleracea Bo2g033970 N 0.851
Bo7g110740 Brassica oleracea Bo7g110740 N 0.851
Bo9g127360 Brassica oleracea Bo9g127360 N 0.851
Bra002788 Brassica rapa Bra002788 N 0.851
Bra019118 Brassica rapa Bra019118 N 0.851
Bra026461 Brassica rapa Bra026461 N 0.851
Bra035633 Brassica rapa Bra035633 N 0.851
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.851
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.851
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.851
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.851
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.851
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.851
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.851
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.851
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.851
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.851
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.851
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.851
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.851
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.851
OB02G18010 Oryza brachyantha OB02G18010 N 0.851
OB06G26630 Oryza brachyantha OB06G26630 N 0.851
OBART02G08990 Oryza barthii OBART02G08990 N 0.851
OBART06G19060 Oryza barthii OBART06G19060 N 0.851
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.851
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.851
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.851
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.851
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.851
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.851
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.851
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.851
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.851
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.851
OS02G0220400 Oryza sativa OS02G0220400 N 0.851
OS06G0571800 Oryza sativa OS06G0571800 N 0.851
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.851
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.851
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.851
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.851
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.851
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.851
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.851
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.851
Si006733m.g Setaria italica Si006733m.g N 0.851
Si019058m.g Setaria italica Si019058m.g N 0.851
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.851
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.851
TCM_037285 Theobroma cacao TCM_037285 N 0.851
TCM_037666 Theobroma cacao TCM_037666 N 0.851
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.851
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.851
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.851
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.851
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.851
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.851
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.851
Cla021191 Citrullus lanatus Cla021191 N 0.851
Pm005502 Prunus mume Pm005502 N 0.851
Pm027164 Prunus mume Pm027164 N 0.851
29794.m003323 Ricinus communis 29794.m003323 N 0.851
29912.m005322 Ricinus communis 29912.m005322 N 0.851
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.851
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.851
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.851
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.851
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.851
mgf008387m Mimulus guttatus mgf008387m N 0.851
mgf025842m Mimulus guttatus mgf025842m N 0.851
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.851
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.851
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.851
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.851
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.851
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.851
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.851
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.851
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.851
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.851
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.851
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.851
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.851
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.851
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.851
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.851
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.851
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.851
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.851
MDP0000131803 Malus domestica MDP0000131803 N 0.851
MDP0000190038 Malus domestica MDP0000190038 N 0.851
MDP0000237740 Malus domestica MDP0000237740 N 0.851
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.851
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.851
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.851
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.851
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.851
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.851
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.851
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.851
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.851
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.851
PK07593.1 Cannabis sativa PK07593.1 N 0.851
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.851
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.842
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.838
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.825
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.825
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.825
Bo3g019610 Brassica oleracea Bo3g019610 I 0.820
Bra006851 Brassica rapa Bra006851 I 0.820
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.820
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.816
PK21934.1 Cannabis sativa PK21934.1 I 0.810
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.808
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.808
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.808
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.808
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.806
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.805
MDP0000309902 Malus domestica MDP0000309902 I 0.805