Bra006851 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra006851 T191940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.811 0.722
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.811 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra006851.1-P GATA 225 260

Links

Other GATA family TFs
Other Brassica rapa TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g019610 Brassica oleracea Bo3g019610 I 0.867
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.867
GATA22 Arabidopsis thaliana AT4G26150 N 0.836
GATA21 Arabidopsis thaliana AT5G56860 N 0.836
Bo1g042950 Brassica oleracea Bo1g042950 N 0.836
Bo2g033970 Brassica oleracea Bo2g033970 N 0.836
Bo7g110740 Brassica oleracea Bo7g110740 N 0.836
Bo9g127360 Brassica oleracea Bo9g127360 N 0.836
Bra002788 Brassica rapa Bra002788 N 0.836
Bra019118 Brassica rapa Bra019118 N 0.836
Bra026461 Brassica rapa Bra026461 N 0.836
Bra035633 Brassica rapa Bra035633 N 0.836
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.836
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.836
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.836
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.836
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.836
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.836
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.836
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.836
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.836
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.836
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.836
TCM_037285 Theobroma cacao TCM_037285 N 0.836
TCM_037666 Theobroma cacao TCM_037666 N 0.836
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.836
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.836
Pm027164 Prunus mume Pm027164 N 0.836
29794.m003323 Ricinus communis 29794.m003323 N 0.836
29912.m005322 Ricinus communis 29912.m005322 N 0.836
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.836
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.836
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.836
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.836
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.836
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.836
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.836
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.836
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.836
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.836
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.836
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.836
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.836
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.836
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.836
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.836
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.836
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.836
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.836
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.836
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.836
MDP0000131803 Malus domestica MDP0000131803 N 0.836
MDP0000190038 Malus domestica MDP0000190038 N 0.836
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.836
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.836
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.836
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.836
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.836
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.836
PK07593.1 Cannabis sativa PK07593.1 N 0.836
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.836
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.831
MDP0000237740 Malus domestica MDP0000237740 N 0.831
MDP0000739900 Malus domestica MDP0000739900 N 0.831
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.825
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.825
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.825
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.825
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.825
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.825
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.825
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.825
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.825
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.825
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.825
OB02G18010 Oryza brachyantha OB02G18010 N 0.825
OB06G26630 Oryza brachyantha OB06G26630 N 0.825
OBART02G08990 Oryza barthii OBART02G08990 N 0.825
OBART06G19060 Oryza barthii OBART06G19060 N 0.825
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.825
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.825
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.825
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.825
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.825
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.825
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.825
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.825
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.825
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.825
OS02G0220400 Oryza sativa OS02G0220400 N 0.825
OS06G0571800 Oryza sativa OS06G0571800 N 0.825
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.825
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.825
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.825
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.825
Si006733m.g Setaria italica Si006733m.g N 0.825
Si019058m.g Setaria italica Si019058m.g N 0.825
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.825
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.825
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.825
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.825
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.825
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.825
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.825
Cla021191 Citrullus lanatus Cla021191 N 0.825
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.825
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.825
mgf008387m Mimulus guttatus mgf008387m N 0.825
mgf025842m Mimulus guttatus mgf025842m N 0.825
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.825
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.825
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.825
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.825
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.822
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.820
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.820
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.820
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.820
Pm005502 Prunus mume Pm005502 N 0.820
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.820
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.812
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.811
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I 0.811
GATA18 Arabidopsis thaliana AT3G50870 I 0.811
GATA19 Arabidopsis thaliana AT4G36620 D 0.811
BGIOSGA001076 Oryza indica BGIOSGA001076 I 0.811
Bo7g064860 Brassica oleracea Bo7g064860 I 0.811
Bo7g100580 Brassica oleracea Bo7g100580 I 0.811
Bo7g118030 Brassica oleracea Bo7g118030 I 0.811
Bo8g080330 Brassica oleracea Bo8g080330 I 0.811
Bra012883 Brassica rapa Bra012883 I 0.811
Bra017766 Brassica rapa Bra017766 I 0.811
Bra036854 Brassica rapa Bra036854 I 0.811
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I 0.811
F775_00859 Aegilops tauschii F775_00859 I 0.811
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.811
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.811
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.811
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.811
GRMZM2G123909 Zea mays GRMZM2G123909 I 0.811
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I 0.811
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I 0.811
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I 0.811
LPERR01G21790 Leersia perrieri LPERR01G21790 I 0.811
LPERR05G21780 Leersia perrieri LPERR05G21780 I 0.811
MLOC_5372 Hordeum vulgare MLOC_5372 I 0.811
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.811
OB01G34710 Oryza brachyantha OB01G34710 I 0.811
OB05G34480 Oryza brachyantha OB05G34480 I 0.811
OBART01G25510 Oryza barthii OBART01G25510 I 0.811
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I 0.811
OMERI01G23200 Oryza meridionalis OMERI01G23200 I 0.811
ONIVA01G28750 Oryza nivara ONIVA01G28750 I 0.811
OPUNC01G25380 Oryza punctata OPUNC01G25380 I 0.811
OPUNC05G23750 Oryza punctata OPUNC05G23750 I 0.811
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I 0.811
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I 0.811
OS01G0662800 Oryza sativa OS01G0662800 I 0.811
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.811
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.811
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.811
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.811
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.811
Sb03g030310 Sorghum bicolor Sb03g030310 I 0.811
Si024214m.g Setaria italica Si024214m.g I 0.811
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.811
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.811
TCM_000376 Theobroma cacao TCM_000376 I 0.811
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I 0.811
MNP Vitis vinifera VIT_04s0023g01840 I 0.811
Ca_02038 Cicer arietinum Ca_02038 I 0.811
Ca_16057 Cicer arietinum Ca_16057 I 0.811
Cla014810 Citrullus lanatus Cla014810 I 0.811
Pm026628 Prunus mume Pm026628 I 0.811
29634.m002146 Ricinus communis 29634.m002146 I 0.811
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.811
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.811
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.811
mgf023982m Mimulus guttatus mgf023982m I 0.811
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I 0.811
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I 0.811
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.811
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.811
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.811
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.811
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.811
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.811
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.811
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.811
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.811
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.811
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.811
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.811
MDP0000253174 Malus domestica MDP0000253174 I 0.811
MDP0000310271 Malus domestica MDP0000310271 I 0.811
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.811
Pavir.J03293 Panicum virgatum Pavir.J03293 I 0.811
Pavir.J26908 Panicum virgatum Pavir.J26908 I 0.811
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.811
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.811
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.811
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.811
PK24471.1 Cannabis sativa PK24471.1 I 0.811
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.811
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.811
BGIOSGA017544 Oryza indica BGIOSGA017544 I 0.807
GATA15 Oryza indica BGIOSGA020424 I 0.807
Bra010563 Brassica rapa Bra010563 I 0.807
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.807
F775_42893 Aegilops tauschii F775_42893 I 0.807
LPERR05G22620 Leersia perrieri LPERR05G22620 I 0.807
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.807
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I 0.807
OMERI03G30220 Oryza meridionalis OMERI03G30220 I 0.807
OMERI05G23010 Oryza meridionalis OMERI05G23010 I 0.807
ONIVA05G29020 Oryza nivara ONIVA05G29020 I 0.807
OPUNC05G24550 Oryza punctata OPUNC05G24550 I 0.807
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I 0.807
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I 0.807
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I 0.807
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I 0.807
OS05G0567900 Oryza sativa OS05G0567900 I 0.807
GATA15 Oryza sativa OS05G0578900 I 0.807
Sb09g028850 Sorghum bicolor Sb09g028850 I 0.807
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.807
Si022366m.g Setaria italica Si022366m.g I 0.807
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.807
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.807
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.807
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.807
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.806
Solyc01g060490.2 Solanum lycopersicum Solyc01g060490.2 N 0.805