CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDX
(
Cavia porcellus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCPOG00000014501
T208157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.867
0.973
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.867
0.964
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000013067
Homeodomain
2
60
NLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
ENSCPOP00000013067
Homeodomain
440
499
QDRTQFSDQDLAMLKKFWDNGMTSLGSVCREKIEAVATELNVDCEIVRTWIGNRRRKYRL
Links
Other
Homeodomain
family TFs
Other
Cavia porcellus
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_00105
Beauveria bassiana
BBA_00105
N
AFUA_4G11850
Aspergillus fumigatus
CADAFUAG00008171
N
NFIA_104380
Neosartorya fischeri
CADNFIAG00009977
N
Cob_05618
Colletotrichum orbiculare
Cob_05618
N
SOCG_00244
Schizosaccharomyces octosporus
SOCG_00244
I
moc3
Schizosaccharomyces pombe
SPAC821.07c
I
gsf1
Schizosaccharomyces pombe
SPBC15D4.02
I
Z517_01120
Fonsecaea pedrosoi
Z517_01120
N