CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cers4b
(
Danio rerio
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSDARG00000018619
T208550_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000033512
Homeodomain
78
126
TPSPSLEAFYTKNSRQPTQIEISGLVKQCGLTHRQVETWFRNRRNLDRP
ENSDARP00000130933
Homeodomain
79
127
TPSPSLEAFYTKNSRQPTQIEISGLVKQCGLTHRQVETWFRNRRNLDRP
Links
Other
Homeodomain
family TFs
Other
Danio rerio
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAL89720
Xenopus laevis
AAL89720
N
0.603
Afo_R008528
Aptenodytes forsteri
Afo_R008528
N
0.615
Alligator_sinensis_CCG000180.1
Alligator sinensis
Alligator_sinensis_CCG000180.1
N
0.664
ENSAMXG00000012483
Astyanax mexicanus
ENSAMXG00000012483
N
0.612
ENSCSAVG00000011823
Ciona savignyi
ENSCSAVG00000011823
N
0.612
cers3b
Danio rerio
ENSDARG00000036337
N
0.616
ENSGACG00000002760
Gasterosteus aculeatus
ENSGACG00000002760
N
0.637
ENSGMOG00000018099
Gadus morhua
ENSGMOG00000018099
N
0.599
ENSLOCG00000004390
Lepisosteus oculatus
ENSLOCG00000004390
N
0.697
ENSMICG00000014767
Microcebus murinus
ENSMICG00000014767
N
0.657
ENSONIG00000017329
Oreochromis niloticus
ENSONIG00000017329
N
0.611
ENSONIG00000019701
Oreochromis niloticus
ENSONIG00000019701
N
0.628
CERS5
Oryzias latipes
ENSORLG00000010219
N
0.611
ENSPFOG00000013551
Poecilia formosa
ENSPFOG00000013551
N
0.611
ENSSHAG00000001540
Sarcophilus harrisii
ENSSHAG00000001540
N
0.635
ENSSHAG00000001747
Sarcophilus harrisii
ENSSHAG00000001747
N
0.642
ENSSHAG00000003870
Sarcophilus harrisii
ENSSHAG00000003870
N
0.648
CERS5
Tetraodon nigroviridis
ENSTNIG00000017897
N
0.611
cers4b
Takifugu rubripes
ENSTRUG00000000191
N
0.724
CERS5
Takifugu rubripes
ENSTRUG00000010435
N
0.599
ENSXMAG00000010322
Xiphophorus maculatus
ENSXMAG00000010322
N
0.604
estExt_gwp.C_860189
Branchiostoma floridae
estExt_gwp.C_860189
N
0.604
e_gw.479.83.1
Branchiostoma floridae
e_gw.479.83.1
N
0.604
LotgiG226091
Lottia gigantea
LotgiG226091
N
0.647
Ocbimv22016239m.g
Octopus bimaculoides
Ocbimv22016239m.g
N
0.623
Ocbimv22022119m.g
Octopus bimaculoides
Ocbimv22022119m.g
N
0.613
SCUD_0001662501
Schistosoma curassoni
SCUD_0001662501
N
0.616
Smp_042440
Schistosoma mansoni
Smp_042440
N
0.608
SROB_0002172301
Schistosoma rodhaini
SROB_0002172301
N
0.608
cers3.L
Xenopus laevis
XB-GENE-6251639
N
0.634
cers5.S
Xenopus laevis
XB-GENE-866438
N
0.603