CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0002172301
(
Schistosoma rodhaini
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SROB_0002172301
T236428_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0002172301-mRNA-1
Homeodomain
75
123
VPDIPVLKRVFEKNHKPTYAQIKELSKTLNLSDRSIEAWFRKRRNCEKS
Links
Other
Homeodomain
family TFs
Other
Schistosoma rodhaini
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_042440
Schistosoma mansoni
Smp_042440
N
0.867
SCUD_0001662501
Schistosoma curassoni
SCUD_0001662501
N
0.834
SMRZ_0001121101
Schistosoma margrebowiei
SMRZ_0001121101
N
0.834
SMTD_0001890201
Schistosoma mattheei
SMTD_0001890201
N
0.834
ENSCSAVG00000011823
Ciona savignyi
ENSCSAVG00000011823
N
0.667
ENSLOCG00000004390
Lepisosteus oculatus
ENSLOCG00000004390
N
0.659
ENSSHAG00000001747
Sarcophilus harrisii
ENSSHAG00000001747
N
0.624
ENSSHAG00000003870
Sarcophilus harrisii
ENSSHAG00000003870
N
0.620
ECANG7_08951
Echinococcus canadensis
ECANG7_08951
N
0.613
EmuJ_001184400
Echinococcus multilocularis
EmuJ_001184400
N
0.613
cers4b
Danio rerio
ENSDARG00000018619
N
0.608
ENSSHAG00000001540
Sarcophilus harrisii
ENSSHAG00000001540
N
0.607
LotgiG226091
Lottia gigantea
LotgiG226091
N
0.605
cers4b
Takifugu rubripes
ENSTRUG00000000191
N
0.600