CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSDNOG00000040998
(
Dasypus novemcinctus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSDNOG00000040998
T208882_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nkx2-1
M00385_2.00
Mus musculus
NNRAGDRN
NYHCTYNN
PBM
Berger et al.(2008)
Titf1_1722
0.867
1.000
Nkx2-4
M00514_2.00
Mus musculus
NNRAGDRBNN
NNVYHCTYNN
PBM
Berger et al.(2008)
Nkx2-4_3074
0.867
1.000
NKX2-1
M09146_2.00
Homo sapiens
BTKGAGWGBN
NVCWCTCMAV
Misc
Kulakovskiy et al.(2013)
NKX21_HUMAN.H11MO.0.A
0.867
1.000
Nkx2-1
M09171_2.00
Mus musculus
NBTKGAGWGB
VCWCTCMAVN
Misc
Kulakovskiy et al.(2013)
NKX21_MOUSE.H11MO.0.A
0.867
1.000
Nkx2-1
M09563_2.00
Mus musculus
BTBRAGWGBH
DVCWCTYVAV
Misc
Heinz et al.(2010)
LungAC-Nkx2.1_GSE43252
0.867
1.000
NKX2-1
M10694_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TITF1_Q3
0.867
1.000
NKX2-1
M10695_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q5_01
0.867
1.000
NKX2-1
M10696_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q5
0.867
1.000
NKX2-1
M10697_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q6
0.867
1.000
ceh-24
M02181_2.00
Caenorhabditis elegans
NNRAKWRNN
NNYWMTYNN
PBM
Weirauch et al.(2014)
pTH6327
0.837
0.877
scro
M03854_2.00
Drosophila melanogaster
NNBRMGTGB
VCACKYVNN
SELEX
Nitta et al.(2015)
scro_1
0.834
0.930
Nkx2-2
M00438_2.00
Mus musculus
NNNRAGDRN
NYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-2_2823
0.798
0.895
Nkx2-2
M09190_2.00
Mus musculus
NTBRAGWGBBN
NVVCWCTYVAN
Misc
Kulakovskiy et al.(2013)
NKX22_MOUSE.H11MO.0.A
0.798
0.895
NKX2-2
M10681_2.00
Homo sapiens
WTAAGTRBTT
AAVYACTTAW
Transfac
Matys et al.(2006)
V$NKX22_01
0.798
0.895
NKX2-2
M10682_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX2B_Q3_01
0.798
0.895
NKX2-2
M10683_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX2B_Q3
0.798
0.895
NKX2-5
M00323_2.00
Homo sapiens
NWYAAGTGSNN
NNSCACTTRWN
PBM
Barrera et al.(2016)
NKX2-5_REF
0.787
0.825
Nkx2-5
M00404_2.00
Mus musculus
NNNRAGDRBN
NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-5_3436
0.787
0.825
NKX2-5
M05346_2.00
Homo sapiens
BHYAAGTGBN
NVCACTTRDV
SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX
0.787
0.825
Nkx2-5
M02686_2.00
Mus musculus
WTAAKWK
MWMTTAW
SELEX
Mathelier et al.(2014)
MA0063.1
0.787
0.825
Nkx2-5
M08136_2.00
Mus musculus
SYTGAGWGSYH
DRSCWCTCARS
ChIP-seq
Mathelier et al.(2014)
MA0503.1
0.787
0.825
NKX2-5
M09163_2.00
Homo sapiens
BKRAGWGV
BCWCTYMV
Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B
0.787
0.825
Nkx2-5
M09177_2.00
Mus musculus
NBYBRAGTGS
SCACTYVRVN
Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A
0.787
0.825
Nkx2-5
M09567_2.00
Mus musculus
HBRAGWGBNN
NNVCWCTYVD
Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529
0.787
0.825
NKX2-5
M10742_2.00
Homo sapiens
TYAAGTG
CACTTRA
Transfac
Matys et al.(2006)
V$NKX25_01
0.787
0.825
NKX2-5
M10743_2.00
Homo sapiens
CWTAATTV
BAATTAWG
Transfac
Matys et al.(2006)
V$NKX25_02
0.787
0.825
NKX2-5
M10744_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q5
0.787
0.825
NKX2-5
M10745_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q6
0.787
0.825
NKX2-5
M00321_2.00
Homo sapiens
HNAAGTRBNN
NNVYACTTND
PBM
Barrera et al.(2016)
NKX2-5_R161P
0.787
0.825
NKX2-5
M05347_2.00
Homo sapiens
BTYAAGTGGN
NCCACTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1
0.787
0.825
NKX2-5
M05348_2.00
Homo sapiens
BTYAACGAB
VTCGTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2
0.787
0.825
NKX2-5
M00322_2.00
Homo sapiens
NNNRNNN
NNNYNNN
PBM
Barrera et al.(2016)
NKX2-5_R190C
0.787
0.807
NKX2-5
M00324_2.00
Homo sapiens
NHNNNNN
NNNNNDN
PBM
Barrera et al.(2016)
NKX2-5_T178M
0.787
0.807
Nkx2-3
M00497_2.00
Mus musculus
NNRAGDRNN
NNYHCTYNN
PBM
Berger et al.(2008)
Nkx2-3_3435
0.785
0.842
NKX2-3
M05042_2.00
Homo sapiens
NNBAAGTGBN
NVCACTTVNN
SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX
0.785
0.842
NKX2-3
M05045_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX
0.785
0.842
NKX2-3
M05043_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1
0.785
0.842
NKX2-3
M05044_2.00
Homo sapiens
SDYAACGHB
VDCGTTRHS
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2
0.785
0.842
NKX2-3
M05046_2.00
Homo sapiens
BNBAAGTGBN
NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1
0.785
0.842
NKX2-3
M05047_2.00
Homo sapiens
SWYAACSHB
VDSGTTRWS
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2
0.785
0.842
vnd
M06551_2.00
Drosophila melanogaster
WYTCAAGTR
YACTTGARW
B1H
Mathelier et al.(2014)
MA0253.1
0.782
0.860
vnd
M06377_2.00
Drosophila melanogaster
WYTCAAGTR
YACTTGARW
B1H
Zhu et al.(2011)
Vnd_Cell_FBgn0003986
0.782
0.860
vnd
M06378_2.00
Drosophila melanogaster
KYTSAAGWGY
RCWCTTSARM
B1H
Zhu et al.(2011)
vnd_FlyReg_FBgn0003986
0.782
0.860
vnd
M06379_2.00
Drosophila melanogaster
BTBAAGTR
YACTTVAV
B1H
Zhu et al.(2011)
Vnd_SOLEXA_FBgn0003986
0.782
0.860
vnd
M09683_2.00
Drosophila melanogaster
TCAAGTGB
VCACTTGA
Misc
Kulakovskiy et al.(2009)
vnd
0.782
0.860
ceh-28
M08210_2.00
Caenorhabditis elegans
AATCGATW
WATCGATT
ChIP-seq
Contrino et al.(2012)
Mw138
0.781
0.684
Nkx2-9
M00520_2.00
Mus musculus
NNNRAGDRBN
NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-9_3082
0.775
0.807
Nkx2-9
M00800_2.00
Mus musculus
NNRAGDRBNN
NNVYHCTYNN
PBM
Weirauch et al.(2013)
pTH2842
0.775
0.807
Nkx2-9
M09215_2.00
Mus musculus
BTCAAGKRB
VYMCTTGAV
Misc
Kulakovskiy et al.(2013)
NKX28_MOUSE.H11MO.0.C
0.775
0.807
tin
M00559_2.00
Drosophila melanogaster
NWYAAGTGGNN
NNCCACTTRWN
PBM
Busser et al.(2012a)
Tin
0.771
0.667
tin
M03809_2.00
Drosophila melanogaster
BTYAAGTGSN
NSCACTTRAV
SELEX
Nitta et al.(2015)
tin_1
0.771
0.667
tin
M06284_2.00
Drosophila melanogaster
BTYAAGTG
CACTTRAV
B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110
0.771
0.667
tin
M06285_2.00
Drosophila melanogaster
BCTCAAGTGSVN
NBSCACTTGAGV
B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110
0.771
0.667
tin
M06286_2.00
Drosophila melanogaster
BWYAAGTR
YACTTRWV
B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110
0.771
0.667
tin
M08421_2.00
Drosophila melanogaster
DBTCRAGTGS
SCACTYGAVH
ChIP-chip
Mathelier et al.(2014)
MA0247.2
0.771
0.667
Nkx2-6
M00496_2.00
Mus musculus
HYAAGTRBNN
NNVYACTTRD
PBM
Berger et al.(2008)
Nkx2-6_3437
0.763
0.789
ceh-22
M00376_2.00
Caenorhabditis elegans
WBRAGTRBNN
NNVYACTYVW
PBM
Berger et al.(2006)
Ceh-22
0.761
0.807
NKX2-5
M00320_2.00
Homo sapiens
NHBAAKWRN
NYWMTTVDN
PBM
Barrera et al.(2016)
NKX2-5_K183E
0.754
0.807
NKX2-8
M00302_2.00
Homo sapiens
NNRAGDRB
VYHCTYNN
PBM
Barrera et al.(2016)
NKX2-8_REF
0.743
0.807
NKX2-8
M05149_2.00
Homo sapiens
BTSRAGTGBN
NVCACTYSAV
SELEX
Yin et al.(2017)
NKX2-8_FL_HT-SELEX
0.743
0.807
NKX2-8
M09145_2.00
Homo sapiens
BTCAAGKRB
VYMCTTGAV
Misc
Kulakovskiy et al.(2013)
NKX28_HUMAN.H11MO.0.C
0.743
0.807
NKX2-8
M05150_2.00
Homo sapiens
GCARTAACGACATC
GATGTCGTTAYTGC
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_1
0.743
0.807
NKX2-8
M05151_2.00
Homo sapiens
BTSAAGTGBN
NVCACTTSAV
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_2
0.743
0.807
NKX2-8
M05152_2.00
Homo sapiens
BTBAACGAB
VTCGTTVAV
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_3
0.743
0.807
NKX2-8
M00301_2.00
Homo sapiens
NNRAKDRB
VYHMTYNN
PBM
Barrera et al.(2016)
NKX2-8_A94T
0.743
0.789
Q24782_9CNID
M02206_2.00
Eleutheria dichotoma
TTAATTAA
TTAATTAA
PBM
Weirauch et al.(2014)
pTH5486
0.600
0.474
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000028511
Homeodomain
51
107
RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR
Links
Other
Homeodomain
family TFs
Other
Dasypus novemcinctus
TFs
832 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000236
Aedes aegypti
AAEL000236
I
AALB006646
Anopheles albimanus
AALB006646
I
AARA001108
Anopheles arabiensis
AARA001108
I
AATE003062
Anopheles atroparvus
AATE003062
I
ACAC_0000772401
Angiostrongylus cantonensis
ACAC_0000772401
I
ACEP16720
Atta cephalotes
ACEP16720
I
ACHR005020
Anopheles christyi
ACHR005020
I
ACOC_0000013301
Angiostrongylus costaricensis
ACOC_0000013301
I
ACUA020854
Anopheles culicifacies
ACUA020854
I
ACYPI002885
Acyrthosiphon pisum
ACYPI002885
I
ADIR000975
Anopheles dirus
ADIR000975
I
AEPI005796
Anopheles epiroticus
AEPI005796
I
AFAF018179
Anopheles farauti
AFAF018179
I
AFUN011568
Anopheles funestus
AFUN011568
I
AGAP000069
Anopheles gambiae
AGAP000069
I
Alligator_sinensis_CCG003246.1
Alligator sinensis
Alligator_sinensis_CCG003246.1
N
AMAM011474
Anopheles maculatus
AMAM011474
I
AMEC012184
Anopheles melas
AMEC012184
I
AMEM007373
Anopheles merus
AMEM007373
I
AMIN002134
Anopheles minimus
AMIN002134
I
ANCCAN_30535
Ancylostoma caninum
ANCCAN_30535
I
ANCCEY_07256
Ancylostoma ceylanicum
ANCCEY_07256
I
AQUA008315
Anopheles quadriannulatus
AQUA008315
I
ASIS005525
Anopheles sinensis
ASIS005525
I
ASTEI06209
Anopheles stephensi
ASTEI06209
I
ASU_00906
Ascaris suum
ASU_00906
I
A_08458
Schistosoma haematobium
A_08458
N
BGIBMGA001488
Bombyx mori
BGIBMGA001488
I
BGLB003447
Biomphalaria glabrata
BGLB003447
I
BTMF_0001614201
Brugia timori
BTMF_0001614201
I
BXY_1193200
Bursaphelenchus xylophilus
BXY_1193200
I
CapteG111555
Capitella teleta
CapteG111555
I
CapteG82802
Capitella teleta
CapteG82802
I
CBG12232
Caenorhabditis briggsae
CBG12232
I
CBN31271
Caenorhabditis brenneri
CBN31271
I
Cflo_07366--XP_001121752.1_APIME
Camponotus floridanus
Cflo_07366--XP_001121752.1_APIME
I
CGI_10003726
Crassostrea gigas
CGI_10003726
I
CGOC_0000329701
Cylicostephanus goldi
CGOC_0000329701
I
CJA06474
Caenorhabditis japonica
CJA06474
N
CLEC001579
Cimex lectularius
CLEC001579
I
Cmyd_10015602
Chelonia mydas
Cmyd_10015602
N
CPIJ009525
Culex quinquefasciatus
CPIJ009525
I
CpipJ_CPIJ009525
Culex pipiens
CpipJ_CPIJ009525
I
CRE23967
Caenorhabditis remanei
CRE23967
I
C_00890
Schistosoma haematobium
C_00890
N
D915_07563
Fasciola hepatica
D915_07563
I
D917_06283
Trichinella nativa
D917_06283
I
D918_04073
Trichuris suis
D918_04073
I
DAPPUDRAFT_50302
Daphnia pulex
DAPPUDRAFT_50302
I
DICVIV_08747
Dictyocaulus viviparus
DICVIV_08747
I
DME_0000296101
Dracunculus medinensis
DME_0000296101
I
ECANG7_08418
Echinococcus canadensis
ECANG7_08418
I
foxq2
Danio rerio
ENSDARG00000071394
N
ENSLACG00000010819
Latimeria chalumnae
ENSLACG00000010819
N
ENSLOCG00000005947
Lepisosteus oculatus
ENSLOCG00000005947
I
ENSONIG00000004794
Oreochromis niloticus
ENSONIG00000004794
N
foxq2
Oryzias latipes
ENSORLG00000004973
N
ENSPFOG00000001440
Poecilia formosa
ENSPFOG00000001440
N
ENSXMAG00000012768
Xiphophorus maculatus
ENSXMAG00000012768
N
estExt_fgenesh2_kg.C_80001
Branchiostoma floridae
estExt_fgenesh2_kg.C_80001
I
estExt_fgenesh2_pg.C_1200108
Branchiostoma floridae
estExt_fgenesh2_pg.C_1200108
I
e_gw.6.414.1
Branchiostoma floridae
e_gw.6.414.1
I
fd102C
Drosophila melanogaster
FBgn0039937
D
GA10799
Drosophila pseudoobscura
FBgn0070855
I
GF10343
Drosophila ananassae
FBgn0087384
I
GG16435
Drosophila erecta
FBgn0108666
I
GH24005
Drosophila grimshawi
FBgn0131461
I
GI14084
Drosophila mojavensis
FBgn0136838
I
GL15611
Drosophila persimilis
FBgn0153215
I
GM26767
Drosophila sechellia
FBgn0181620
I
GJ15974
Drosophila virilis
FBgn0203160
I
GK13662
Drosophila willistoni
FBgn0215670
I
GE14501
Drosophila yakuba
FBgn0232105
I
GB50374
Apis mellifera
GB50374
I
GPUH_0002128801
Gongylonema pulchrum
GPUH_0002128801
I
HCOI02176800
Haemonchus contortus
HCOI02176800
I
HDID_0000955901
Hymenolepis diminuta
HDID_0000955901
I
HelroG146879
Helobdella robusta
HelroG146879
I
HelroG84905
Helobdella robusta
HelroG84905
I
HMEL012130
Heliconius melpomene
HMEL012130
I
HmN_000125600
Hymenolepis microstoma
HmN_000125600
I
HNAJ_0000218001
Hymenolepis nana
HNAJ_0000218001
I
HPBE_0001940301
Heligmosomoides bakeri
HPBE_0001940301
I
HPLM_0001940801
Haemonchus placei
HPLM_0001940801
I
Hsal_00505--XP_001121752.1_APIME
Harpegnathos saltator
Hsal_00505--XP_001121752.1_APIME
I
ISCW003951
Ixodes scapularis
ISCW003951
I
KGM_06490
Danaus plexippus
KGM_06490
I
L596_g8980
Steinernema carpocapsae
L596_g8980
I
L889_g23699
Steinernema feltiae
L889_g23699
I
L892_g5229
Steinernema scapterisci
L892_g5229
I
L893_g32272
Steinernema glaseri
L893_g32272
I
L898_g16488
Steinernema monticolum
L898_g16488
I
LCUP005975
Lucilia cuprina
LCUP005975
I
LDEC001528
Leptinotarsa decemlineata
LDEC001528
I
LLOJ007413
Lutzomyia longipalpis
LLOJ007413
I
LotgiG69928
Lottia gigantea
LotgiG69928
I
LotgiG79770
Lottia gigantea
LotgiG79770
I
LotgiG79781
Lottia gigantea
LotgiG79781
I
MCOS_0000398701
Mesocestoides corti
MCOS_0000398701
N
MESCA005623
Megaselia scalaris
MESCA005623
I
NBR_0000095001
Nippostrongylus brasiliensis
NBR_0000095001
I
nDi.2.2.2.g05283
Dirofilaria immitis
nDi.2.2.2.g05283
I
NECAME_04384
Necator americanus
NECAME_04384
I
NEMVEDRAFT_v1g125256
Nematostella vectensis
NEMVEDRAFT_v1g125256
I
NEMVEDRAFT_v1g39596
Nematostella vectensis
NEMVEDRAFT_v1g39596
I
NEMVEDRAFT_v1g59063
Nematostella vectensis
NEMVEDRAFT_v1g59063
I
nOo.2.0.1.g07936
Onchocerca ochengi
nOo.2.0.1.g07936
I
NV18839
Nasonia vitripennis
NV18839
I
Ocbimv22038677m.g
Octopus bimaculoides
Ocbimv22038677m.g
I
OESDEN_02306
Oesophagostomum dentatum
OESDEN_02306
I
Ogr12164
Ophisaurus gracilis
Ogr12164
N
PHUM244390
Pediculus humanus
PHUM244390
I
PPAI000826
Phlebotomus papatasi
PPAI000826
I
Pvit_09831
Pogona vitticeps
Pvit_09831
N
RPRC002475
Rhodnius prolixus
RPRC002475
I
Sakowv30023329m.g
Saccoglossus kowalevskii
Sakowv30023329m.g
I
Sakowv30023336m.g
Saccoglossus kowalevskii
Sakowv30023336m.g
I
Sakowv30044994m.g
Saccoglossus kowalevskii
Sakowv30044994m.g
N
SBAD_0000682701
Soboliphyme baturini
SBAD_0000682701
I
SINV17382
Solenopsis invicta
SINV17382
I
SMAR012448
Strigamia maritima
SMAR012448
I
SMRZ_0001178901
Schistosoma margrebowiei
SMRZ_0001178901
N
SMU15004452
Schmidtea mediterranea
SMU15004452
I
SVUK_0000095001
Strongylus vulgaris
SVUK_0000095001
I
TC004761
Tribolium castaneum
TC004761
I
TCLT_0000158601
Thelazia callipaeda
TCLT_0000158601
I
TCNE_0000717001
Toxocara canis
TCNE_0000717001
I
tetur01g09690
Tetranychus urticae
tetur01g09690
I
TMUE_s0045003300
Trichuris muris
TMUE_s0045003300
I
TTAC_0000212301
Hydatigera taeniaeformis
TTAC_0000212301
I
TTRE_0000002201
Trichuris trichiura
TTRE_0000002201
I
fkh-10
Caenorhabditis elegans
WBGene00001442
I
WBGene00238063
Onchocerca volvulus
WBGene00238063
I
WUBG_10187
Wuchereria bancrofti
WUBG_10187
I
XP_002159677.1
Hydra magnipapillata
XP_002159677.1
I
YQE_09099
Dendroctonus ponderosae
YQE_09099
I