CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Rhox8
(
Rattus norvegicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSRNOG00000031534
T215465_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rhox8
M02103_2.00
Rattus norvegicus
NGGTGTWAH
DTWACACCN
PBM
Weirauch et al.(2014)
pTH6071
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02103_2.00
Homeodomain
1
57
SRNRHRFTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWFKSRRAKYRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000041820
Homeodomain
143
199
SRNRHRFTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWFKSRRAKYRK
Links
Other
Homeodomain
family TFs
Other
Rattus norvegicus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_06840
Capronia epimyces
A1O3_06840
N
A1O5_09572
Cladophialophora psammophila
A1O5_09572
N
A1O7_07289
Cladophialophora yegresii
A1O7_07289
N
A1O9_02464
Exophiala aquamarina
A1O9_02464
N
ACLA_065740
Aspergillus clavatus
CADACLAG00006139
N
CADANGAG00009534
Aspergillus niger
CADANGAG00009534
N
estExt_fgenesh1_pg.C_sca_17_chr8_1_00069
Nectria haematococca
estExt_fgenesh1_pg.C_sca_17_chr8_1_00069
N
fgenesh1_pg.00868_#_68
Aspergillus carbonarius
fgenesh1_pg.00868_#_68
N
G647_02803
Cladophialophora carrionii
G647_02803
N
HMPREF1120_09145
Exophiala dermatitidis
HMPREF1120_09145
N
HMPREF1541_00390
Cyphellophora europaea
HMPREF1541_00390
N
NechaG101164
Fusarium solani
NechaG101164
N
PV05_04333
Exophiala xenobiotica
PV05_04333
N
PV05_08746
Exophiala xenobiotica
PV05_08746
N
PV06_01296
Exophiala oligosperma
PV06_01296
N
PV07_11558
Cladophialophora immunda
PV07_11558
N
W97_09274
Coniosporium apollinis
W97_09274
N
Z518_06537
Rhinocladiella mackenziei
Z518_06537
N
Z519_01024
Cladophialophora bantiana
Z519_01024
N