nkx6.3 (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000005150 T216651_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nkx6-1
M00466_2.00 		Mus musculus
NDTDATNRN
NYNATHAHN		 PBM
Berger et al.(2008)
Nkx6-1_2825 		0.867 0.947
Nkx6-3
M00522_2.00 		Mus musculus
NDYDATNRN
NYNATHRHN		 PBM
Berger et al.(2008)
Nkx6-3_3446 		0.867 0.947
NKX6-3
M05242_2.00 		Homo sapiens
NWTAATGRB
VYCATTAWN		 SELEX
Yin et al.(2017)
NKX6-3_eDBD_HT-SELEX 		0.867 0.947
NKX6-1
M09151_2.00 		Homo sapiens
RAHWRATKDSNWWWTRATD
HATYAWWWNSHMATYWDTY		 Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B 		0.867 0.947
Nkx6-1
M09200_2.00 		Mus musculus
HNWRATKDNHWWWTRATDR
YHATYAWWWDNHMATYWND		 Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A 		0.867 0.947
Nkx6-1
M09573_2.00 		Mus musculus
NDTAATKR
YMATTAHN		 Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975 		0.867 0.947
NKX6-1
M10718_2.00 		Homo sapiens
HWTTTAATKGRWT
AWYCMATTAAAWD		 Transfac
Matys et al.(2006)
V$NKX61_01 		0.867 0.947
NKX6-1
M10719_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX61_08 		0.867 0.947
NKX6-3
M05243_2.00 		Homo sapiens
DWTAATGRB
VYCATTAWH		 SELEX
Yin et al.(2017)
NKX6-3_eDBD_Methyl-HT-SELEX 		0.867 0.947
NKX6-2
M05184_2.00 		Homo sapiens
DTAATTRN
NYAATTAH		 SELEX
Yin et al.(2017)
NKX6-2_eDBD_HT-SELEX 		0.858 0.930
NKX6-2
M05186_2.00 		Homo sapiens
WTAATKAB
VTMATTAW		 SELEX
Yin et al.(2017)
NKX6-2_FL_HT-SELEX 		0.858 0.930
NKX6-2
M10711_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX62_Q2 		0.858 0.930
NKX6-2
M05185_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
NKX6-2_eDBD_Methyl-HT-SELEX 		0.858 0.930
NKX6-2
M05187_2.00 		Homo sapiens
WTAATKAB
VTMATTAW		 SELEX
Yin et al.(2017)
NKX6-2_FL_Methyl-HT-SELEX 		0.858 0.930
HGTX
M03869_2.00 		Drosophila melanogaster
DTAATKRN
NYMATTAH		 SELEX
Nitta et al.(2015)
HGTX_1 		0.855 0.930
HGTX
M03870_2.00 		Drosophila melanogaster
DTAATKRN
NYMATTAH		 SELEX
Nitta et al.(2015)
HGTX_2 		0.855 0.930
HGTX
M06542_2.00 		Drosophila melanogaster
DTAATKA
TMATTAH		 B1H
Mathelier et al.(2014)
MA0191.1 		0.855 0.930
HGTX
M06360_2.00 		Drosophila melanogaster
DDTAATKA
TMATTAHH		 B1H
Zhu et al.(2011)
Hgtx_Cell_FBgn0040318 		0.855 0.930
HGTX
M06361_2.00 		Drosophila melanogaster
NWTAATKA
TMATTAWN		 B1H
Zhu et al.(2011)
Hgtx_SOLEXA_FBgn0040318 		0.855 0.930
CBG20882
M01244_2.00 		Caenorhabditis briggsae
NDHDATDRN
NYHATHDHN		 PBM
Lambert et al.(2019)
pTH11477 		0.811 0.772
Q0N4H9_NEMVE
M02165_2.00 		Nematostella vectensis
NNYRWWNNN
NNNWWYRNN		 PBM
Weirauch et al.(2014)
pTH6101 		0.685 0.561
NEMVEDRAFT_v1g129868
M02146_2.00 		Nematostella vectensis
NYRAWNDNN
NNHNWTYRN		 PBM
Weirauch et al.(2014)
pTH5749 		0.679 0.561
NK7.1
M03847_2.00 		Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB		 SELEX
Nitta et al.(2015)
NK7.1_1 		0.617 0.596
NK7.1
M03848_2.00 		Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN		 SELEX
Nitta et al.(2015)
NK7.1_2 		0.617 0.596
NK7.1
M06524_2.00 		Drosophila melanogaster
TTAATDR
YHATTAA		 B1H
Mathelier et al.(2014)
MA0196.1 		0.617 0.596
NK7.1
M06323_2.00 		Drosophila melanogaster
NTTAATDR
YHATTAAN		 B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321 		0.617 0.596
NK7.1
M06324_2.00 		Drosophila melanogaster
YTAATDR
YHATTAR		 B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321 		0.617 0.596
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000012335 Homeodomain 151 207
ENSTRUP00000012336 Homeodomain 149 205

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22632_Multiple Saccharomyces mikatae 22632_Multiple I 0.000
23064_YPR104C Saccharomyces paradoxus 23064_YPR104C I 0.000
25921_YPR104C Saccharomyces bayanus 25921_YPR104C I 0.000
AACERI_AaceriAEL327W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL327W I 0.000
AGOS_AEL327W Ashbya gossypii AGOS_AEL327W D 0.000
BN7_771 Wickerhamomyces ciferrii BN7_771 I 0.000
CAGL0G01782g Candida glabrata CAGL0G01782g I 0.000
Ecym_2615 Eremothecium cymbalariae Ecym_2615 I 0.000
JL09_g4297 Pichia kudriavzevii JL09_g4297 I 0.000
KAFR_0D04220 Kazachstania africana KAFR_0D04220 I 0.000
KLLA0_F08206g Kluyveromyces lactis KLLA0_F08206g D 0.000
KLTH0D03036g Lachancea thermotolerans KLTH0D03036g I 0.000
KLTH0D03036g Kluyveromyces thermotolerans KLTH0D03036g I 0.000
KNAG_0A07530 Kazachstania naganishii KNAG_0A07530 I 0.000
Kpol_1018p143 Vanderwaltozyma polyspora Kpol_1018p143 I 0.000
KUCA_T00003332001 Kuraishia capsulata KUCA_T00003332001 I 0.000
Kwal_7268 Kluyveromyces waltii Kwal_7268 I 0.000
LALA0_S08e07316g Lachancea lanzarotensis LALA0_S08e07316g I 0.000
NCAS_0A11450 Naumovozyma castellii NCAS_0A11450 I 0.000
PAS_chr4_0980 Komagataella pastoris PAS_chr4_0980 I 0.000
SAKL0B09284g Lachancea kluyveri SAKL0B09284g I 0.000
Scas_Contig705.31 Saccharomyces castellii Scas_Contig705.31 I 0.000
SKUD_169306 Saccharomyces kudriavzevii SKUD_169306 I 0.000
TBLA_0C02390 Tetrapisispora blattae TBLA_0C02390 I 0.000
TPHA_0M01760 Tetrapisispora phaffii TPHA_0M01760 I 0.000
XP_002494105.1 Pichia pastoris XP_002494105.1 I 0.000
FHL1 Saccharomyces cerevisiae YPR104C D 0.000
ZBAI_00452 Zygosaccharomyces bailii ZBAI_00452 I 0.000
ZBAI_05606 Zygosaccharomyces bailii ZBAI_05606 I 0.000