GLYMA13G23890 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA13G23890 T218861_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.656 0.877
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.656 0.877
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.656 0.877
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.656 0.877
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.643 0.825
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.643 0.789
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.643 0.789
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.643 0.789
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.643 0.789
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.625 0.772
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.625 0.772
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.625 0.754
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.625 0.754
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.625 0.754
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.625 0.754
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.625 0.754
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.625 0.754
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.604 0.737
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.604 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G23890.3 Homeodomain 64 120

Links

Other Homeodomain family TFs
Other Glycine max TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_192725 Agaricus bisporus AGABI2DRAFT_192725 I 0.000
BOTBODRAFT_214576 Botryobasidium botryosum BOTBODRAFT_214576 I 0.000
CAD26261 Encephalitozoon cuniculi CAD26261 D 0.000
CC1G_01962 Coprinopsis cinerea CC1G_01962 I 0.000
CERSUDRAFT_94820 Ceriporiopsis subvermispora CERSUDRAFT_94820 I 0.000
CNJ00280 Cryptococcus neoformans CNJ00280 I 0.000
CY34DRAFT_106181 Suillus luteus CY34DRAFT_106181 I 0.000
CY34DRAFT_109842 Suillus luteus CY34DRAFT_109842 I 0.000
warA Dictyostelium discoideum DDB_G0291075 I 0.000
E5Q_01806 Mixia osmundae E5Q_01806 I 0.000
E5Q_03771 Mixia osmundae E5Q_03771 I 0.000
EDEG_01594 Edhazardia aedis EDEG_01594 I 0.000
EFA86584.1 Polysphondylium pallidum EFA86584.1 I 0.000
EHEL_031090 Encephalitozoon hellem EHEL_031090 I 0.000
Eint_031070 Encephalitozoon intestinalis Eint_031070 I 0.000
EROM_031050 Encephalitozoon romaleae EROM_031050 I 0.000
estExt_fgenesh1_pg.C_10219 Sporobolomyces roseus estExt_fgenesh1_pg.C_10219 I 0.000
estExt_fgeneshDP_pg.C_350041 Dictyostelium purpureum estExt_fgeneshDP_pg.C_350041 I 0.000
EuGene3000454 Heterobasidion annosum EuGene3000454 N 0.000
fgenesh1_pg.C_scaffold_15000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000074 I 0.000
fgeneshMC_pg.1_#_125 Mucor circinelloides fgeneshMC_pg.1_#_125 I 0.000
fgeneshMC_pg.1_#_1591 Mucor circinelloides fgeneshMC_pg.1_#_1591 I 0.000
fgeneshMC_pg.1_#_69 Mucor circinelloides fgeneshMC_pg.1_#_69 I 0.000
fgeneshMC_pg.4_#_986 Mucor circinelloides fgeneshMC_pg.4_#_986 I 0.000
fgeneshMC_pg.7_#_41 Mucor circinelloides fgeneshMC_pg.7_#_41 I 0.000
fgeneshPB_pg.18__155 Phycomyces blakesleeanus fgeneshPB_pg.18__155 I 0.000
fgeneshPB_pg.6__195 Phycomyces blakesleeanus fgeneshPB_pg.6__195 I 0.000
FOMPIDRAFT_1128018 Fomitopsis pinicola FOMPIDRAFT_1128018 I 0.000
GALMADRAFT_211191 Galerina marginata GALMADRAFT_211191 I 0.000
GLOINDRAFT_21145 Rhizophagus irregularis GLOINDRAFT_21145 I 0.000
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I 0.000
GLOINDRAFT_43985 Rhizophagus irregularis GLOINDRAFT_43985 I 0.000
GLOTRDRAFT_92391 Gloeophyllum trabeum GLOTRDRAFT_92391 I 0.000
H311_05138 Anncaliia algerae H311_05138 I 0.000
HETIRDRAFT_169178 Heterobasidion irregulare HETIRDRAFT_169178 N 0.000
J056_004115 Wallemia ichthyophaga J056_004115 I 0.000
JAAARDRAFT_47621 Jaapia argillacea JAAARDRAFT_47621 I 0.000
K443DRAFT_127593 Laccaria amethystina K443DRAFT_127593 I 0.000
KNAG_0A05600 Kazachstania naganishii KNAG_0A05600 I 0.000
L804_00025 Cryptococcus gattii L804_00025 I 0.000
LACBIDRAFT_293988 Laccaria bicolor LACBIDRAFT_293988 I 0.000
M378DRAFT_8263 Amanita muscaria M378DRAFT_8263 I 0.000
M404DRAFT_74218 Pisolithus tinctorius M404DRAFT_74218 I 0.000
M407DRAFT_11655 Tulasnella calospora M407DRAFT_11655 I 0.000
M407DRAFT_4599 Tulasnella calospora M407DRAFT_4599 I 0.000
M408DRAFT_258951 Serendipita vermifera M408DRAFT_258951 I 0.000
M413DRAFT_413744 Hebeloma cylindrosporum M413DRAFT_413744 I 0.000
M896_030550 Ordospora colligata M896_030550 I 0.000
MELLADRAFT_35504 Melampsora laricipopulina MELLADRAFT_35504 I 0.000
MVLG_00113 Microbotryum violaceum MVLG_00113 I 0.000
MVLG_02963 Microbotryum violaceum MVLG_02963 I 0.000
NAPIS_ORF00184 Nosema apis NAPIS_ORF00184 I 0.000
NAPIS_ORF00325 Nosema apis NAPIS_ORF00325 I 0.000
NBO_11g0012 Nosema bombycis NBO_11g0012 I 0.000
NBO_6g0031 Nosema bombycis NBO_6g0031 I 0.000
NBO_85g0005 Nosema bombycis NBO_85g0005 I 0.000
NCAS_0B05980 Naumovozyma castellii NCAS_0B05980 I 0.000
NCER_100211 Nosema ceranae NCER_100211 I 0.000
NCER_100315 Nosema ceranae NCER_100315 I 0.000
NDAI_0B03290 Naumovozyma dairenensis NDAI_0B03290 I 0.000
NEMVEDRAFT_v1g105595 Nematostella vectensis NEMVEDRAFT_v1g105595 D 0.000
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I 0.000
NERG_00880 Nematocida sp NERG_00880 I 0.000
PAXRUDRAFT_10369 Paxillus rubicundulus PAXRUDRAFT_10369 I 0.000
PGTG_00338 Puccinia graminis PGTG_00338 I 0.000
PHACADRAFT_257545 Phanerochaete carnosa PHACADRAFT_257545 I 0.000
PHLGIDRAFT_55548 Phlebiopsis gigantea PHLGIDRAFT_55548 I 0.000
PIIN_02203 Piriformospora indica PIIN_02203 I 0.000
PILCRDRAFT_110903 Piloderma croceum PILCRDRAFT_110903 I 0.000
PISMIDRAFT_65337 Pisolithus microcarpus PISMIDRAFT_65337 I 0.000
PLEOSDRAFT_173849 Pleurotus ostreatus PLEOSDRAFT_173849 I 0.000
POSPLDRAFT_98870 Postia placenta POSPLDRAFT_98870 I 0.000
PTTG_03012 Puccinia triticina PTTG_03012 I 0.000
PTTG_07330 Puccinia triticina PTTG_07330 I 0.000
RHTO_02593 Rhodosporidium toruloides RHTO_02593 I 0.000
RHTO_06229 Rhodosporidium toruloides RHTO_06229 I 0.000
RO3G_02291 Rhizopus oryzae RO3G_02291 I 0.000
RO3G_03200 Rhizopus oryzae RO3G_03200 I 0.000
RO3G_08777 Rhizopus oryzae RO3G_08777 I 0.000
RO3G_11930 Rhizopus oryzae RO3G_11930 I 0.000
RO3G_13360 Rhizopus oryzae RO3G_13360 I 0.000
RTG_01934 Rhodotorula glutinis RTG_01934 I 0.000
Scas_Contig613.11 Saccharomyces castellii Scas_Contig613.11 I 0.000
SCHCODRAFT_257987 Schizophyllum commune SCHCODRAFT_257987 I 0.000
SCLCIDRAFT_97512 Scleroderma citrinum SCLCIDRAFT_97512 I 0.000
SERLA73DRAFT_72643 Serpula lacrymans SERLA73DRAFT_72643 I 0.000
SPPG_01974 Spizellomyces punctatus SPPG_01974 N 0.000
SPPG_05107 Spizellomyces punctatus SPPG_05107 I 0.000
THOM_0497 Trachipleistophora hominis THOM_0497 I 0.000
V565_070630 Rhizoctonia solani V565_070630 I 0.000
VCUG_00708 Vavraia culicis VCUG_00708 I 0.000
WALSEDRAFT_59197 Wallemia sebi WALSEDRAFT_59197 I 0.000
YALI0_F16852g Yarrowia lipolytica YALI0_F16852g I 0.000