CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_08777
(
Rhizopus oryzae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
RO3G_08777
T203775_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEMVEDRAFT_v1g105595
M02143_2.00
Nematostella vectensis
NTWATWRN
NYWATWAN
PBM
Weirauch et al.(2014)
pTH5503
0.645
0.456
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_08776
Homeodomain
67
123
IRPRKRFTSNQIHLLEMEYMKSDHPSRETKETLANQFKTSIRRIQIWFQNRRAKEKR
Links
Other
Homeodomain
family TFs
Other
Rhizopus oryzae
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M407DRAFT_11655
Tulasnella calospora
M407DRAFT_11655
I
0.652
RO3G_03200
Rhizopus oryzae
RO3G_03200
I
0.645
NAPIS_ORF00325
Nosema apis
NAPIS_ORF00325
I
0.645
NBO_6g0031
Nosema bombycis
NBO_6g0031
I
0.645
NCER_100315
Nosema ceranae
NCER_100315
I
0.645
NEMVEDRAFT_v1g105595
Nematostella vectensis
NEMVEDRAFT_v1g105595
D
0.645
RHTO_02593
Rhodosporidium toruloides
RHTO_02593
I
0.642
H311_05138
Anncaliia algerae
H311_05138
I
0.633
M407DRAFT_4599
Tulasnella calospora
M407DRAFT_4599
I
0.626
J056_004115
Wallemia ichthyophaga
J056_004115
I
0.623
WALSEDRAFT_59197
Wallemia sebi
WALSEDRAFT_59197
I
0.623
GALMADRAFT_211191
Galerina marginata
GALMADRAFT_211191
I
0.622
SERLA73DRAFT_72643
Serpula lacrymans
SERLA73DRAFT_72643
I
0.618
SPPG_05107
Spizellomyces punctatus
SPPG_05107
I
0.617
CC1G_01962
Coprinopsis cinerea
CC1G_01962
I
0.617
K443DRAFT_127593
Laccaria amethystina
K443DRAFT_127593
I
0.617
LACBIDRAFT_293988
Laccaria bicolor
LACBIDRAFT_293988
I
0.617
Moror_6758
Moniliophthora roreri
Moror_6758
I
0.617
PLEOSDRAFT_173849
Pleurotus ostreatus
PLEOSDRAFT_173849
I
0.617
fgeneshMC_pg.1_#_1591
Mucor circinelloides
fgeneshMC_pg.1_#_1591
I
0.617
JAAARDRAFT_47621
Jaapia argillacea
JAAARDRAFT_47621
I
0.614
GLOINDRAFT_21145
Rhizophagus irregularis
GLOINDRAFT_21145
I
0.613
YALI0_F16852g
Yarrowia lipolytica
YALI0_F16852g
I
0.613
fgeneshMC_pg.1_#_69
Mucor circinelloides
fgeneshMC_pg.1_#_69
I
0.613
fgeneshMC_pg.4_#_986
Mucor circinelloides
fgeneshMC_pg.4_#_986
I
0.613
fgeneshPB_pg.18__155
Phycomyces blakesleeanus
fgeneshPB_pg.18__155
I
0.613
fgeneshPB_pg.6__195
Phycomyces blakesleeanus
fgeneshPB_pg.6__195
I
0.612
warA
Dictyostelium discoideum
DDB_G0291075
I
0.611
M413DRAFT_413744
Hebeloma cylindrosporum
M413DRAFT_413744
I
0.610
PHACADRAFT_257545
Phanerochaete carnosa
PHACADRAFT_257545
I
0.610
PHLGIDRAFT_55548
Phlebiopsis gigantea
PHLGIDRAFT_55548
I
0.610
estExt_fgeneshDP_pg.C_350041
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_350041
I
0.610
fgenesh1_pg.C_scaffold_15000074
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_15000074
I
0.610
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
0.610
fgeneshMC_pg.1_#_125
Mucor circinelloides
fgeneshMC_pg.1_#_125
I
0.608
M378DRAFT_8263
Amanita muscaria
M378DRAFT_8263
I
0.607
MVLG_00113
Microbotryum violaceum
MVLG_00113
I
0.606
PGTG_00338
Puccinia graminis
PGTG_00338
I
0.606
PTTG_07330
Puccinia triticina
PTTG_07330
I
0.606
NBO_11g0012
Nosema bombycis
NBO_11g0012
I
0.604
NBO_85g0005
Nosema bombycis
NBO_85g0005
I
0.604
RO3G_02291
Rhizopus oryzae
RO3G_02291
I
0.603
PAXRUDRAFT_10369
Paxillus rubicundulus
PAXRUDRAFT_10369
I
0.602