OGLUM01G28210 (Oryza glumaepatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OGLUM01G28210 T221388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.782 0.737
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.779 0.789
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.779 0.789
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.769 0.719
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.769 0.719
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.769 0.702
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.769 0.702
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.769 0.702
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.712 0.719
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.712 0.702
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.712 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM01G28210.1 Homeodomain 76 132

Links

Other Homeodomain family TFs
Other Oryza glumaepatula TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28307.m000017 Ricinus communis 28307.m000017 I 0.000
30072.m000927 Ricinus communis 30072.m000927 I 0.000
AALB010774 Anopheles albimanus AALB010774 N 0.000
AATE010517 Anopheles atroparvus AATE010517 N 0.000
ACHR009406 Anopheles christyi ACHR009406 N 0.000
ACOM023178 Anopheles coluzzii ACOM023178 N 0.000
ACOM031313 Anopheles coluzzii ACOM031313 N 0.000
ACUA017712 Anopheles culicifacies ACUA017712 N 0.000
ACUA018515 Anopheles culicifacies ACUA018515 N 0.000
ADAC000821 Anopheles darlingi ADAC000821 N 0.000
AEPI000126 Anopheles epiroticus AEPI000126 N 0.000
AEPI002968 Anopheles epiroticus AEPI002968 N 0.000
AFAF008679 Anopheles farauti AFAF008679 N 0.000
Afo_R012244 Aptenodytes forsteri Afo_R012244 N 0.000
AFUN007608 Anopheles funestus AFUN007608 N 0.000
Alligator_sinensis_CCG010633.1 Alligator sinensis Alligator_sinensis_CCG010633.1 N 0.000
AMAM014256 Anopheles maculatus AMAM014256 N 0.000
AMEC006413 Anopheles melas AMEC006413 N 0.000
AMEC007961 Anopheles melas AMEC007961 N 0.000
AMEM017070 Anopheles merus AMEM017070 N 0.000
AMIN011087 Anopheles minimus AMIN011087 N 0.000
ANCCAN_03409 Ancylostoma caninum ANCCAN_03409 N 0.000
ANCCAN_11057 Ancylostoma caninum ANCCAN_11057 N 0.000
ANCDUO_08183 Ancylostoma duodenale ANCDUO_08183 N 0.000
AQUA001991 Anopheles quadriannulatus AQUA001991 N 0.000
ASIS018452 Anopheles sinensis ASIS018452 N 0.000
ASIS020685 Anopheles sinensis ASIS020685 N 0.000
ASTEI02549 Anopheles stephensi ASTEI02549 N 0.000
A_05714 Schistosoma haematobium A_05714 N 0.000
Bo3g003970 Brassica oleracea Bo3g003970 N 0.000
Bo3g055280 Brassica oleracea Bo3g055280 N 0.000
Bostr.3148s0154 Boechera stricta Bostr.3148s0154 N 0.000
Bostr.3751s0010 Boechera stricta Bostr.3751s0010 N 0.000
BRADI1G63680 Brachypodium distachyon BRADI1G63680 N 0.000
BTMF_0000360801 Brugia timori BTMF_0000360801 N 0.000
cassava15562.m1 Manihot esculenta cassava15562.m1 I 0.000
cassava41170.m1 Manihot esculenta cassava41170.m1 N 0.000
Ciclev10021682m.g Citrus clementina Ciclev10021682m.g I 0.000
CLEC001113 Cimex lectularius CLEC001113 N 0.000
CLEC003989 Cimex lectularius CLEC003989 N 0.000
CPIJ004950 Culex quinquefasciatus CPIJ004950 N 0.000
CPIJ019460 Culex quinquefasciatus CPIJ019460 N 0.000
CpipJ_CPIJ004950 Culex pipiens CpipJ_CPIJ004950 N 0.000
CpipJ_CPIJ019460 Culex pipiens CpipJ_CPIJ019460 N 0.000
Cucsa.336980 Cucumis sativus Cucsa.336980 I 0.000
D917_09256 Trichinella nativa D917_09256 I 0.000
DICVIV_11023 Dictyocaulus viviparus DICVIV_11023 N 0.000
ECPE_0001015501 Echinostoma caproni ECPE_0001015501 N 0.000
EEL_0000211501 Elaeophora elaphi EEL_0000211501 N 0.000
EMIHUDRAFT_217694 Emiliania huxleyi EMIHUDRAFT_217694 N 0.000
EMIHUDRAFT_458874 Emiliania huxleyi EMIHUDRAFT_458874 N 0.000
ENSFALG00000010250 Ficedula albicollis ENSFALG00000010250 N 0.000
DLX3 Felis catus ENSFCAG00000002643 N 0.000
DLX1 Loxodonta africana ENSLAFG00000003551 N 0.000
DLX3 Loxodonta africana ENSLAFG00000028511 N 0.000
ENSMGAG00000010118 Meleagris gallopavo ENSMGAG00000010118 N 0.000
ENSMGAG00000016039 Meleagris gallopavo ENSMGAG00000016039 N 0.000
ENSMODG00000028843 Monodelphis domestica ENSMODG00000028843 N 0.000
ENSOANG00000010094 Ornithorhynchus anatinus ENSOANG00000010094 N 0.000
ENSPMAG00000010155 Petromyzon marinus ENSPMAG00000010155 N 0.000
ENSSHAG00000011988 Sarcophilus harrisii ENSSHAG00000011988 I 0.000
ENSTGUG00000001643 Taeniopygia guttata ENSTGUG00000001643 N 0.000
EVEC_0000608301 Enterobius vermicularis EVEC_0000608301 N 0.000
EVEC_0001263401 Enterobius vermicularis EVEC_0001263401 N 0.000
F775_04825 Aegilops tauschii F775_04825 N 0.000
F775_05084 Aegilops tauschii F775_05084 N 0.000
fgenesh2_pg.scaffold_94000102 Branchiostoma floridae fgenesh2_pg.scaffold_94000102 N 0.000
Gorai.007G346300 Gossypium raimondii Gorai.007G346300 I 0.000
Gorai.009G223100 Gossypium raimondii Gorai.009G223100 N 0.000
Gorai.N024800 Gossypium raimondii Gorai.N024800 N 0.000
GPUH_0000517501 Gongylonema pulchrum GPUH_0000517501 N 0.000
GPUH_0002121901 Gongylonema pulchrum GPUH_0002121901 N 0.000
GRMZM2G069028 Zea mays GRMZM2G069028 I 0.000
GRMZM2G122537 Zea mays GRMZM2G122537 I 0.000
GRMZM2G131476 Zea mays GRMZM2G131476 I 0.777
GSMUA_Achr5G27730_001 Musa acuminata GSMUA_Achr5G27730_001 I 0.000
GSMUA_Achr6G15910_001 Musa acuminata GSMUA_Achr6G15910_001 I 0.000
Hba_17036 Heterorhabditis bacteriophora Hba_17036 N 0.000
HHAL000970-PA Halyomorpha halys HHAL000970-PA N 0.000
HMEL008501 Heliconius melpomene HMEL008501 N 0.000
Hsal_04718--NA Harpegnathos saltator Hsal_04718--NA N 0.000
ISCW020503 Ixodes scapularis ISCW020503 N 0.000
LCUP002617 Lucilia cuprina LCUP002617 N 0.000
LDEC004784 Leptinotarsa decemlineata LDEC004784 N 0.000
LLOJ002764 Lutzomyia longipalpis LLOJ002764 N 0.000
LPERR08G06500 Leersia perrieri LPERR08G06500 N 0.000
Lus10005997.g Linum usitatissimum Lus10005997.g N 0.000
Lus10013960.g Linum usitatissimum Lus10013960.g N 0.000
Lus10018726.g Linum usitatissimum Lus10018726.g N 0.000
Lus10023332.g Linum usitatissimum Lus10023332.g N 0.000
M378DRAFT_56764 Amanita muscaria M378DRAFT_56764 N 0.000
MCINX006168 Melitaea cinxia MCINX006168 N 0.000
MDP0000866008 Malus domestica MDP0000866008 N 0.000
MESCA002450 Megaselia scalaris MESCA002450 N 0.000
mgf013558m Mimulus guttatus mgf013558m N 0.000
MLOC_1969 Hordeum vulgare MLOC_1969 I 0.000
MLOC_34121 Hordeum vulgare MLOC_34121 N 0.000
MLOC_53697 Hordeum vulgare MLOC_53697 N 0.000
MLOC_54441 Hordeum vulgare MLOC_54441 I 0.737
MLOC_77955 Hordeum vulgare MLOC_77955 I 0.723
MTR_4g088065 Medicago truncatula MTR_4g088065 N 0.000
Myotis_brandtii_DLX3_10017059 Myotis brandtii Myotis_brandtii_DLX3_10017059 N 0.000
nLs.2.1.2.g07663 Litomosoides sigmodontis nLs.2.1.2.g07663 N 0.000
nOo.2.0.1.g04758 Onchocerca ochengi nOo.2.0.1.g04758 N 0.000
nOo.2.0.1.g09965 Onchocerca ochengi nOo.2.0.1.g09965 N 0.000
nRc.2.0.1.g40851 Romanomermis culicivorax nRc.2.0.1.g40851 N 0.000
OB01G45460 Oryza brachyantha OB01G45460 N 0.000
OB10G17260 Oryza brachyantha OB10G17260 N 0.000
OLONG_000500 Oryza longistaminata OLONG_000500 N 0.000
OLONG_017897 Oryza longistaminata OLONG_017897 I 0.000
OPUNC01G25730 Oryza punctata OPUNC01G25730 N 0.000
orange1.1g047211m.g Citrus sinensis orange1.1g047211m.g I 0.000
Pavir.Ib00453 Panicum virgatum Pavir.Ib00453 N 0.000
Pavir.J05483 Panicum virgatum Pavir.J05483 N 0.000
PDK_20s1352211g006 Phoenix dactylifera PDK_20s1352211g006 N 0.000
PK06427.1 Cannabis sativa PK06427.1 N 0.000
PK11453.1 Cannabis sativa PK11453.1 N 0.000
PLEOSDRAFT_1026389 Pleurotus ostreatus PLEOSDRAFT_1026389 N 0.000
POPTR_0003s14700 Populus trichocarpa POPTR_0003s14700 N 0.000
POPTR_0013s06310 Populus trichocarpa POPTR_0013s06310 I 0.000
PPA25533 Pristionchus pacificus PPA25533 N 0.000
PXEA_0001679301 Protopolystoma xenopodis PXEA_0001679301 N 0.000
RPRC002292 Rhodnius prolixus RPRC002292 N 0.000
Sakowv30037727m.g Saccoglossus kowalevskii Sakowv30037727m.g N 0.000
SapurV1A.0163s0040 Salix purpurea SapurV1A.0163s0040 I 0.770
SapurV1A.1660s0010 Salix purpurea SapurV1A.1660s0010 I 0.000
SBAD_0000398601 Soboliphyme baturini SBAD_0000398601 N 0.000
scaffold54-EXSNAP2012.71 Pristionchus exspectatus scaffold54-EXSNAP2012.71 N 0.000
SCLCIDRAFT_1213522 Scleroderma citrinum SCLCIDRAFT_1213522 N 0.000
SCUD_0001639501 Schistosoma curassoni SCUD_0001639501 N 0.000
SCUD_0001847001 Schistosoma curassoni SCUD_0001847001 N 0.000
SCUD_0002346201 Schistosoma curassoni SCUD_0002346201 N 0.000
Smp_136900 Schistosoma mansoni Smp_136900 N 0.000
SMRZ_0001858401 Schistosoma margrebowiei SMRZ_0001858401 N 0.000
SMTD_0001724601 Schistosoma mattheei SMTD_0001724601 N 0.000
SPBR_00949 Sporothrix brasiliensis SPBR_00949 N 0.000
SPER_0000821201 Spirometra erinaceieuropaei SPER_0000821201 N 0.000
SPER_0001680701 Spirometra erinaceieuropaei SPER_0001680701 N 0.000
SROB_0000877601 Schistosoma rodhaini SROB_0000877601 N 0.000
SROB_0001224301 Schistosoma rodhaini SROB_0001224301 N 0.000
SVUK_0001919201 Strongylus vulgaris SVUK_0001919201 N 0.000
TCM_025805 Theobroma cacao TCM_025805 I 0.000
TELCIR_17471 Teladorsagia circumcincta TELCIR_17471 N 0.000
TRAES3BF096700070CFD_g Triticum aestivum TRAES3BF096700070CFD_g N 0.000
Traes_1AL_1444D461A Triticum aestivum Traes_1AL_1444D461A N 0.000
Traes_1AL_1444D461A1 Triticum aestivum Traes_1AL_1444D461A1 N 0.000
Traes_3DL_37D040907 Triticum aestivum Traes_3DL_37D040907 N 0.454
Traes_4BL_085791CB2 Triticum aestivum Traes_4BL_085791CB2 N 0.000
TRE_0000521801 Trichobilharzia regenti TRE_0000521801 N 0.000
TRE_0000614101 Trichobilharzia regenti TRE_0000614101 N 0.000
TRE_0002045401 Trichobilharzia regenti TRE_0002045401 N 0.000
TRIUR3_08856 Triticum urartu TRIUR3_08856 N 0.000
TRIUR3_33331 Triticum urartu TRIUR3_33331 N 0.000
VIT_08s0056g01200 Vitis vinifera VIT_08s0056g01200 I 0.000
WUBG_02918 Wuchereria bancrofti WUBG_02918 N 0.000