CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Lus10013960.g
(
Linum usitatissimum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Lus10013960.g
T228864_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10013960
Homeodomain
44
85
YNPVNPPRDEIRKIRVQLQEFGQVGDANVFYWFQNRKSRSKH
Links
Other
Homeodomain
family TFs
Other
Linum usitatissimum
TFs
139 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G63680
Brachypodium distachyon
BRADI1G63680
N
0.808
LPERR08G06500
Leersia perrieri
LPERR08G06500
N
0.808
Traes_4BL_085791CB2
Triticum aestivum
Traes_4BL_085791CB2
N
0.808
Cla017771
Citrullus lanatus
Cla017771
N
0.808
Pavir.J05483
Panicum virgatum
Pavir.J05483
N
0.808
PK06427.1
Cannabis sativa
PK06427.1
N
0.791
OPUNC01G25730
Oryza punctata
OPUNC01G25730
N
0.786
MTR_4g088065
Medicago truncatula
MTR_4g088065
N
0.752
EMIHUDRAFT_217694
Emiliania huxleyi
EMIHUDRAFT_217694
N
0.684
cassava41170.m1
Manihot esculenta
cassava41170.m1
N
0.670
GPUH_0000517501
Gongylonema pulchrum
GPUH_0000517501
N
0.667
SPER_0000821201
Spirometra erinaceieuropaei
SPER_0000821201
N
0.666
SPER_0001680701
Spirometra erinaceieuropaei
SPER_0001680701
N
0.666
mgf013558m
Mimulus guttatus
mgf013558m
N
0.664
Lus10018726.g
Linum usitatissimum
Lus10018726.g
N
0.664
OB01G45460
Oryza brachyantha
OB01G45460
N
0.660
GRMZM2G069028
Zea mays
GRMZM2G069028
I
0.651
GRMZM2G122537
Zea mays
GRMZM2G122537
I
0.651
MLOC_53697
Hordeum vulgare
MLOC_53697
N
0.651
Lus10023332.g
Linum usitatissimum
Lus10023332.g
N
0.651
Myotis_brandtii_DLX3_10017059
Myotis brandtii
Myotis_brandtii_DLX3_10017059
N
0.646
PK11453.1
Cannabis sativa
PK11453.1
N
0.641
ENSOANG00000010094
Ornithorhynchus anatinus
ENSOANG00000010094
N
0.640
SBAD_0000398601
Soboliphyme baturini
SBAD_0000398601
N
0.640
SVUK_0001919201
Strongylus vulgaris
SVUK_0001919201
N
0.640
DLX3
Loxodonta africana
ENSLAFG00000028511
N
0.638
SapurV1A.0163s0040
Salix purpurea
SapurV1A.0163s0040
I
0.634
TRAES3BF096700070CFD_g
Triticum aestivum
TRAES3BF096700070CFD_g
N
0.632
Gorai.009G223100
Gossypium raimondii
Gorai.009G223100
N
0.628
Bostr.3148s0154
Boechera stricta
Bostr.3148s0154
N
0.627
LDEC004784
Leptinotarsa decemlineata
LDEC004784
N
0.627
fgenesh2_pg.scaffold_94000102
Branchiostoma floridae
fgenesh2_pg.scaffold_94000102
N
0.626
SMRZ_0001858401
Schistosoma margrebowiei
SMRZ_0001858401
N
0.626
TRIUR3_33331
Triticum urartu
TRIUR3_33331
N
0.624
F775_05084
Aegilops tauschii
F775_05084
N
0.621
SMTD_0001724601
Schistosoma mattheei
SMTD_0001724601
N
0.621
SROB_0000877601
Schistosoma rodhaini
SROB_0000877601
N
0.621
CpipJ_CPIJ004950
Culex pipiens
CpipJ_CPIJ004950
N
0.620
WUBG_02918
Wuchereria bancrofti
WUBG_02918
N
0.620
ADAC000821
Anopheles darlingi
ADAC000821
N
0.620
CPIJ004950
Culex quinquefasciatus
CPIJ004950
N
0.620
DLX3
Felis catus
ENSFCAG00000002643
N
0.620
ENSMGAG00000010118
Meleagris gallopavo
ENSMGAG00000010118
N
0.620
ENSPMAG00000010155
Petromyzon marinus
ENSPMAG00000010155
N
0.620
HMEL008501
Heliconius melpomene
HMEL008501
N
0.620
ISCW020503
Ixodes scapularis
ISCW020503
N
0.620
MCINX006168
Melitaea cinxia
MCINX006168
N
0.620
PPA25533
Pristionchus pacificus
PPA25533
N
0.620
RPRC002292
Rhodnius prolixus
RPRC002292
N
0.620
CLEC003989
Cimex lectularius
CLEC003989
N
0.620
AATE010517
Anopheles atroparvus
AATE010517
N
0.620
ACHR009406
Anopheles christyi
ACHR009406
N
0.620
ACOM031313
Anopheles coluzzii
ACOM031313
N
0.620
ACUA017712
Anopheles culicifacies
ACUA017712
N
0.620
AEPI002968
Anopheles epiroticus
AEPI002968
N
0.620
AFAF008679
Anopheles farauti
AFAF008679
N
0.620
AFUN007608
Anopheles funestus
AFUN007608
N
0.620
AMAM014256
Anopheles maculatus
AMAM014256
N
0.620
AMEC006413
Anopheles melas
AMEC006413
N
0.620
AMEM017070
Anopheles merus
AMEM017070
N
0.620
AMIN011087
Anopheles minimus
AMIN011087
N
0.620
AQUA001991
Anopheles quadriannulatus
AQUA001991
N
0.620
ASIS020685
Anopheles sinensis
ASIS020685
N
0.620
ASTEI02549
Anopheles stephensi
ASTEI02549
N
0.620
ANCCAN_03409
Ancylostoma caninum
ANCCAN_03409
N
0.620
BTMF_0000360801
Brugia timori
BTMF_0000360801
N
0.620
D917_09256
Trichinella nativa
D917_09256
I
0.620
DICVIV_11023
Dictyocaulus viviparus
DICVIV_11023
N
0.620
EEL_0000211501
Elaeophora elaphi
EEL_0000211501
N
0.620
EVEC_0000608301
Enterobius vermicularis
EVEC_0000608301
N
0.620
EVEC_0001263401
Enterobius vermicularis
EVEC_0001263401
N
0.620
GPUH_0002121901
Gongylonema pulchrum
GPUH_0002121901
N
0.620
nLs.2.1.2.g07663
Litomosoides sigmodontis
nLs.2.1.2.g07663
N
0.620
nOo.2.0.1.g04758
Onchocerca ochengi
nOo.2.0.1.g04758
N
0.620
nOo.2.0.1.g09965
Onchocerca ochengi
nOo.2.0.1.g09965
N
0.620
nRc.2.0.1.g40851
Romanomermis culicivorax
nRc.2.0.1.g40851
N
0.620
scaffold54-EXSNAP2012.71
Pristionchus exspectatus
scaffold54-EXSNAP2012.71
N
0.620
SCUD_0001639501
Schistosoma curassoni
SCUD_0001639501
N
0.620
SROB_0001224301
Schistosoma rodhaini
SROB_0001224301
N
0.620
TELCIR_17471
Teladorsagia circumcincta
TELCIR_17471
N
0.620
TRE_0000521801
Trichobilharzia regenti
TRE_0000521801
N
0.620
Smp_136900
Schistosoma mansoni
Smp_136900
N
0.619
A_05714
Schistosoma haematobium
A_05714
N
0.619
Bo3g003970
Brassica oleracea
Bo3g003970
N
0.618
ENSSHAG00000011988
Sarcophilus harrisii
ENSSHAG00000011988
I
0.618
F775_04825
Aegilops tauschii
F775_04825
N
0.618
GRMZM2G131476
Zea mays
GRMZM2G131476
I
0.618
MLOC_77955
Hordeum vulgare
MLOC_77955
I
0.618
OLONG_000500
Oryza longistaminata
OLONG_000500
N
0.618
Traes_1AL_1444D461A1
Triticum aestivum
Traes_1AL_1444D461A1
N
0.618
Traes_1AL_1444D461A
Triticum aestivum
Traes_1AL_1444D461A
N
0.618
Gorai.N024800
Gossypium raimondii
Gorai.N024800
N
0.618
CLEC001113
Cimex lectularius
CLEC001113
N
0.616
TRE_0002045401
Trichobilharzia regenti
TRE_0002045401
N
0.616
Bo3g055280
Brassica oleracea
Bo3g055280
N
0.613
DLX1
Loxodonta africana
ENSLAFG00000003551
N
0.612
ENSFALG00000010250
Ficedula albicollis
ENSFALG00000010250
N
0.609
ENSMGAG00000016039
Meleagris gallopavo
ENSMGAG00000016039
N
0.609
ENSTGUG00000001643
Taeniopygia guttata
ENSTGUG00000001643
N
0.609
TRIUR3_08856
Triticum urartu
TRIUR3_08856
N
0.609
Afo_R012244
Aptenodytes forsteri
Afo_R012244
N
0.609
Alligator_sinensis_CCG010633.1
Alligator sinensis
Alligator_sinensis_CCG010633.1
N
0.609
HHAL000970-PA
Halyomorpha halys
HHAL000970-PA
N
0.609
LCUP002617
Lucilia cuprina
LCUP002617
N
0.609
AALB010774
Anopheles albimanus
AALB010774
N
0.609
ACOM023178
Anopheles coluzzii
ACOM023178
N
0.609
ACUA018515
Anopheles culicifacies
ACUA018515
N
0.609
AEPI000126
Anopheles epiroticus
AEPI000126
N
0.609
AMEC007961
Anopheles melas
AMEC007961
N
0.609
LLOJ002764
Lutzomyia longipalpis
LLOJ002764
N
0.609
ECPE_0001015501
Echinostoma caproni
ECPE_0001015501
N
0.609
TRE_0000614101
Trichobilharzia regenti
TRE_0000614101
N
0.609
EMIHUDRAFT_458874
Emiliania huxleyi
EMIHUDRAFT_458874
N
0.608
MLOC_34121
Hordeum vulgare
MLOC_34121
N
0.606
MLOC_54441
Hordeum vulgare
MLOC_54441
I
0.606
Traes_3DL_37D040907
Triticum aestivum
Traes_3DL_37D040907
N
0.606
Hsal_04718--NA
Harpegnathos saltator
Hsal_04718--NA
N
0.606
28307.m000017
Ricinus communis
28307.m000017
I
0.606
MDP0000866008
Malus domestica
MDP0000866008
N
0.606
Pavir.Ib00453
Panicum virgatum
Pavir.Ib00453
N
0.606
ANCCAN_11057
Ancylostoma caninum
ANCCAN_11057
N
0.606
PLEOSDRAFT_1026389
Pleurotus ostreatus
PLEOSDRAFT_1026389
N
0.603
SCLCIDRAFT_1213522
Scleroderma citrinum
SCLCIDRAFT_1213522
N
0.602
MESCA002450
Megaselia scalaris
MESCA002450
N
0.601
POPTR_0003s14700
Populus trichocarpa
POPTR_0003s14700
N
0.601
CpipJ_CPIJ019460
Culex pipiens
CpipJ_CPIJ019460
N
0.600
CPIJ019460
Culex quinquefasciatus
CPIJ019460
N
0.600
ENSMODG00000028843
Monodelphis domestica
ENSMODG00000028843
N
0.600
MLOC_1969
Hordeum vulgare
MLOC_1969
I
0.600
OB10G17260
Oryza brachyantha
OB10G17260
N
0.600
SPBR_00949
Sporothrix brasiliensis
SPBR_00949
N
0.600
Sakowv30037727m.g
Saccoglossus kowalevskii
Sakowv30037727m.g
N
0.600
Bostr.3751s0010
Boechera stricta
Bostr.3751s0010
N
0.600
Pavir.J33909
Panicum virgatum
Pavir.J33909
I
0.600
Pavir.J34132
Panicum virgatum
Pavir.J34132
I
0.600
PDK_20s1352211g006
Phoenix dactylifera
PDK_20s1352211g006
N
0.600
ANCDUO_08183
Ancylostoma duodenale
ANCDUO_08183
N
0.600
PXEA_0001679301
Protopolystoma xenopodis
PXEA_0001679301
N
0.600
SCUD_0001847001
Schistosoma curassoni
SCUD_0001847001
N
0.600