CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0672201
(
Oryza sativa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
OS01G0672201
T221977_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.646
0.732
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0672201-00
Homeodomain
48
103
VKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Oryza sativa
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF18477
Drosophila ananassae
FBgn0095495
N
0.000
GH18280
Drosophila grimshawi
FBgn0125748
N
0.000
GI24088
Drosophila mojavensis
FBgn0146811
N
0.000
GK11825
Drosophila willistoni
FBgn0213836
N
0.000
MDOA010732
Musca domestica
MDOA010732
N
0.000