POPTR_0014s02540 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0014s02540 T222565_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.751 0.714
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.751 0.714
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s02540.1 Homeodomain 77 137

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

442 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_04352 Capronia epimyces A1O3_04352 N 0.000
A1O5_10239 Cladophialophora psammophila A1O5_10239 N 0.000
BBA_03452 Beauveria bassiana BBA_03452 I 0.000
CCM_02166 Cordyceps militaris CCM_02166 I 0.000
CFIO01_13633 Colletotrichum fioriniae CFIO01_13633 I 0.000
CGGC5_12854 Colletotrichum gloeosporioides CGGC5_12854 I 0.000
CH063_01030 Colletotrichum higginsianum CH063_01030 I 0.000
CMQ_6814 Grosmannia clavigera CMQ_6814 I 0.000
estExt_Genewise1Plus.C_110569 Neurospora discreta estExt_Genewise1Plus.C_110569 I 0.000
estExt_Genewise1Plus.C_21651 Cryphonectria parasitica estExt_Genewise1Plus.C_21651 I 0.000
F503_00471 Ophiostoma piceae uamh F503_00471 I 0.000
FFUJ_01862 Fusarium fujikuroi FFUJ_01862 I 0.000
FGRRES_01638 Fusarium graminearum FGRRES_01638 I 0.000
FOXG_11065 Fusarium oxysporum FOXG_11065 I 0.000
FPSE_09752 Fusarium pseudograminearum FPSE_09752 I 0.000
FVEG_09736 Fusarium verticillioides FVEG_09736 I 0.000
GGTG_04497 Gaeumannomyces graminis GGTG_04497 I 0.000
GLRG_10273 Colletotrichum graminicola GLRG_10273 I 0.000
HMPREF1120_04565 Exophiala dermatitidis HMPREF1120_04565 N 0.000
HMPREF1541_07161 Cyphellophora europaea HMPREF1541_07161 N 0.000
MAPG_08463 Magnaporthe poae MAPG_08463 I 0.000
MYCTH_2312830 Myceliophthora thermophila MYCTH_2312830 I 0.000
NCU05411 Neurospora crassa NCU05411 D 0.000
NEUTE1DRAFT_102079 Neurospora tetrasperma NEUTE1DRAFT_102079 I 0.000
PFICI_14901 Pestalotiopsis fici PFICI_14901 I 0.000
PV07_02500 Cladophialophora immunda PV07_02500 N 0.000
SMAC_04150 Sordaria macrospora SMAC_04150 I 0.000
Z517_00100 Fonsecaea pedrosoi Z517_00100 N 0.000
Z518_02653 Rhinocladiella mackenziei Z518_02653 N 0.000
Z519_10905 Cladophialophora bantiana Z519_10905 N 0.000