VIT_10s0003g00290 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_10s0003g00290 T224546_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.853 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_10s0003g00290.t01 Homeodomain 27 83

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAD26403 Encephalitozoon cuniculi CAD26403 N
THOM_0075 Trachipleistophora hominis THOM_0075 N