Ca_01919 (Cicer arietinum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ca_01919 T225398_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.854 0.929
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.854 0.929
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.854 0.929
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.850 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.850 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_01919 Homeodomain 18 77

Links

Other Homeodomain family TFs
Other Cicer arietinum TFs

332 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bHLH115 Arabidopsis thaliana AT1G51070 N 0.000
Bo00779s020 Brassica oleracea Bo00779s020 N 0.000
Bo1g118840 Brassica oleracea Bo1g118840 N 0.000
Bostr.26675s0081 Boechera stricta Bostr.26675s0081 N 0.000
Cagra.5770s0003 Capsella grandiflora Cagra.5770s0003 N 0.000
Carubv10011628m.g Capsella rubella Carubv10011628m.g N 0.000
bHLH115 Arabidopsis lyrata fgenesh2_kg.1__4178__AT1G51070.1 N 0.000
Gorai.002G016500 Gossypium raimondii Gorai.002G016500 N 0.000
MDP0000323291 Malus domestica MDP0000323291 N 0.000
scaffold_30700001.1 Arabidopsis lyrata scaffold_30700001.1 N 0.000
Thhalv10011752m.g Eutrema salsugineum Thhalv10011752m.g N 0.000