CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo1g118840
(
Brassica oleracea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bo1g118840
T031087_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g118840.1
bHLH
70
119
SSKVCREKQRRDKLNDKFTELSSILEPGRAPKTDKVAIINDAIRMVNQAR
Links
Other
bHLH
family TFs
Other
Brassica oleracea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo00779s020
Brassica oleracea
Bo00779s020
N
0.914
Bra030459
Brassica rapa
Bra030459
N
0.894
bHLH115
Arabidopsis thaliana
AT1G51070
N
0.879
bHLH115
Arabidopsis lyrata
fgenesh2_kg.1__4178__AT1G51070.1
N
0.879
Cagra.5770s0003
Capsella grandiflora
Cagra.5770s0003
N
0.879
Thhalv10011752m.g
Eutrema salsugineum
Thhalv10011752m.g
N
0.862
Carubv10011628m.g
Capsella rubella
Carubv10011628m.g
N
0.852
GLYMA12G32280
Glycine max
GLYMA12G32280
N
0.848
Al_scaffold_0004_1533
Arabidopsis lyrata
Al_scaffold_0004_1533
N
0.847
scaffold_30700001.1
Arabidopsis lyrata
scaffold_30700001.1
N
0.847
Bostr.26675s0081
Boechera stricta
Bostr.26675s0081
N
0.847