CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla019493
(
Citrullus lanatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cla019493
T225625_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KNOX3_HORVU
M10790_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$KNOX3_01
0.599
0.719
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla019493
Homeodomain
55
114
TKKKANLPREAKQILLHWWNSHSQWPYPTDTEKVELAESTGLTRKQINNWFINQRKRHWK
Links
Other
Homeodomain
family TFs
Other
Citrullus lanatus
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP26739
Atta cephalotes
ACEP26739
N
0.000
Cflo_10787--XP_397181.1_APIME
Camponotus floridanus
Cflo_10787--XP_397181.1_APIME
N
0.000
DAPPUDRAFT_97641
Daphnia pulex
DAPPUDRAFT_97641
N
0.000
GB50020
Apis mellifera
GB50020
N
0.000
HHAL004588-PA
Halyomorpha halys
HHAL004588-PA
N
0.000
Hsal_04889--XP_397181.1_APIME
Harpegnathos saltator
Hsal_04889--XP_397181.1_APIME
N
0.000
KGM_01878
Danaus plexippus
KGM_01878
N
0.000
L798_06440
Zootermopsis nevadensis
L798_06440
N
0.000
MCINX010660
Melitaea cinxia
MCINX010660
N
0.000
MCINX011468
Melitaea cinxia
MCINX011468
N
0.000
NV13582
Nasonia vitripennis
NV13582
N
0.000
PHUM335200
Pediculus humanus
PHUM335200
N
0.000
RPRC006502
Rhodnius prolixus
RPRC006502
N
0.000
SINV22119
Solenopsis invicta
SINV22119
N
0.000
SMAR014120
Strigamia maritima
SMAR014120
N
0.000
SNAPOd2T00000256001
Oikopleura dioica
SNAPOd2T00000256001
I
0.000
TC013218
Tribolium castaneum
TC013218
N
0.000