Cla019493 (Citrullus lanatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cla019493 T225625_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.599 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019493 Homeodomain 55 114

Links

Other Homeodomain family TFs
Other Citrullus lanatus TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.196810 Cucumis sativus Cucsa.196810 N 0.683
GLYMA04G35850 Glycine max GLYMA04G35850 I 0.643
gene32207-v1.0-hybrid Fragaria vesca gene32207-v1.0-hybrid I 0.633
MDP0000254187 Malus domestica MDP0000254187 I 0.620
BRADI1G12677 Brachypodium distachyon BRADI1G12677 I 0.612
TCM_010433 Theobroma cacao TCM_010433 I 0.604
evm.TU.supercontig_69.81 Carica papaya evm.TU.supercontig_69.81 I 0.604
Gorai.005G180500 Gossypium raimondii Gorai.005G180500 I 0.604
ORGLA03G0270100 Oryza glaberrima ORGLA03G0270100 I 0.603
POPTR_0008s19290 Populus trichocarpa POPTR_0008s19290 I 0.600
POPTR_0012s08900 Populus trichocarpa POPTR_0012s08900 I 0.600
AMTR_s00085p00165180 Amborella trichopoda AMTR_s00085p00165180 I 0.600
Ciclev10022781m.g Citrus clementina Ciclev10022781m.g I 0.600
VIT_17s0000g08710 Vitis vinifera VIT_17s0000g08710 I 0.600
29631.m001056 Ricinus communis 29631.m001056 I 0.600
Aquca_002_00078 Aquilegia coerulea Aquca_002_00078 I 0.600
Ca_18152 Cicer arietinum Ca_18152 I 0.600
cassava23924.valid.m1 Manihot esculenta cassava23924.valid.m1 I 0.600
MTR_5g033720 Medicago truncatula MTR_5g033720 I 0.600
GLYMA01G03450 Glycine max GLYMA01G03450 I 0.600
orange1.1g038569m.g Citrus sinensis orange1.1g038569m.g I 0.600
SapurV1A.0069s0110 Salix purpurea SapurV1A.0069s0110 I 0.600
GLYMA02G04190 Glycine max GLYMA02G04190 I 0.600
Lus10013037.g Linum usitatissimum Lus10013037.g I 0.600
Lus10029125.g Linum usitatissimum Lus10029125.g I 0.600
Cla021211 Citrullus lanatus Cla021211 I 0.599
Cla023003 Citrullus lanatus Cla023003 I 0.599
Pavir.Ia00733 Panicum virgatum Pavir.Ia00733 I 0.599
30170.m013647 Ricinus communis 30170.m013647 I 0.599
TCM_034627 Theobroma cacao TCM_034627 I 0.599
Pavir.Bb00225 Panicum virgatum Pavir.Bb00225 I 0.599
Pavir.J00864 Panicum virgatum Pavir.J00864 I 0.599
Pavir.J30099 Panicum virgatum Pavir.J30099 I 0.599
PDK_20s1334792g001 Phoenix dactylifera PDK_20s1334792g001 I 0.599
Traes_2DL_0D933D88B Triticum aestivum Traes_2DL_0D933D88B I 0.599
Traes_2BL_921BF570C Triticum aestivum Traes_2BL_921BF570C I 0.599
Thhalv10028724m.g Eutrema salsugineum Thhalv10028724m.g I 0.599
VIT_12s0059g01190 Vitis vinifera VIT_12s0059g01190 I 0.599
Traes_2AL_E687AF1BE Triticum aestivum Traes_2AL_E687AF1BE I 0.599
cassava22394.valid.m1 Manihot esculenta cassava22394.valid.m1 I 0.599
Ca_09202 Cicer arietinum Ca_09202 I 0.599
Cucsa.353140 Cucumis sativus Cucsa.353140 I 0.599
orange1.1g029411m.g Citrus sinensis orange1.1g029411m.g I 0.599
Ciclev10015818m.g Citrus clementina Ciclev10015818m.g I 0.599
Ciclev10001508m.g Citrus clementina Ciclev10001508m.g I 0.599
Eucgr.F00106 Eucalyptus grandis Eucgr.F00106 I 0.599
Eucgr.H02544 Eucalyptus grandis Eucgr.H02544 I 0.599
Gorai.009G223200 Gossypium raimondii Gorai.009G223200 I 0.599
MDP0000280307 Malus domestica MDP0000280307 I 0.599
Carubv10002748m.g Capsella rubella Carubv10002748m.g I 0.599
Cagra.7524s0001 Capsella grandiflora Cagra.7524s0001 I 0.599
Cucsa.395320 Cucumis sativus Cucsa.395320 I 0.599
Gorai.010G029000 Gossypium raimondii Gorai.010G029000 I 0.599
cassava35932.valid.m1 Manihot esculenta cassava35932.valid.m1 I 0.599
mgf024741m Mimulus guttatus mgf024741m I 0.599
Aquca_032_00056 Aquilegia coerulea Aquca_032_00056 I 0.599
Bostr.3877s0047 Boechera stricta Bostr.3877s0047 I 0.599
Aquca_133_00021 Aquilegia coerulea Aquca_133_00021 I 0.599
Pavir.Ba03909 Panicum virgatum Pavir.Ba03909 I 0.599
Sb01g009480 Sorghum bicolor Sb01g009480 I 0.599
GSMUA_Achr4G28270_001 Musa acuminata GSMUA_Achr4G28270_001 I 0.599
GSMUA_Achr6G04640_001 Musa acuminata GSMUA_Achr6G04640_001 I 0.599
GSMUA_Achr3G26230_001 Musa acuminata GSMUA_Achr3G26230_001 I 0.599
GSMUA_Achr2G13200_001 Musa acuminata GSMUA_Achr2G13200_001 I 0.599
GSMUA_Achr10G28700_001 Musa acuminata GSMUA_Achr10G28700_001 I 0.599
GSMUA_Achr7G08050_001 Musa acuminata GSMUA_Achr7G08050_001 I 0.599
GSMUA_Achr7G27540_001 Musa acuminata GSMUA_Achr7G27540_001 I 0.599
MLOC_11678 Hordeum vulgare MLOC_11678 I 0.599
LPERR07G01870 Leersia perrieri LPERR07G01870 I 0.599
LPERR03G27340 Leersia perrieri LPERR03G27340 I 0.599
KNOX3_HORVU Hordeum vulgare KNOX3_HORVU D 0.599
GRMZM2G028041 Zea mays GRMZM2G028041 I 0.599
GRMZM2G017087 Zea mays GRMZM2G017087 I 0.599
Bra000638 Brassica rapa Bra000638 I 0.599
Bo3g043050 Brassica oleracea Bo3g043050 I 0.599
OSH15 Oryza indica BGIOSGA025091 I 0.599
KNAT1 Arabidopsis thaliana AT4G08150 I 0.599
BRADI1G57607 Brachypodium distachyon BRADI1G57607 I 0.599
F775_14143 Aegilops tauschii F775_14143 I 0.599
GLYMA14G10430 Glycine max GLYMA14G10430 I 0.599
GLYMA0041S00360 Glycine max GLYMA0041S00360 I 0.599
KNAT1 Arabidopsis lyrata fgenesh2_kg.6__2861__AT4G08150.1 I 0.599
F775_31062 Aegilops tauschii F775_31062 I 0.599
MTR_1g017080 Medicago truncatula MTR_1g017080 I 0.599
OB03G39780 Oryza brachyantha OB03G39780 I 0.599
ORUFI03G34060 Oryza rufipogon ORUFI03G34060 I 0.599
ORUFI07G01770 Oryza rufipogon ORUFI07G01770 I 0.599
ORGLA07G0017300 Oryza glaberrima ORGLA07G0017300 I 0.599
ORGLA03G0296100 Oryza glaberrima ORGLA03G0296100 I 0.599
OPUNC07G02410 Oryza punctata OPUNC07G02410 I 0.599
OSH15 Oryza sativa OS07G0129700 I 0.599
PGSC0003DMG400013493 Solanum tuberosum PGSC0003DMG400013493 I 0.599
Si037920m.g Setaria italica Si037920m.g I 0.599
Si031454m.g Setaria italica Si031454m.g I 0.599
Sb02g002200 Sorghum bicolor Sb02g002200 I 0.599
POPTR_0010s05340 Populus trichocarpa POPTR_0010s05340 I 0.599
OPUNC03G29850 Oryza punctata OPUNC03G29850 I 0.599
ONIVA07G00730 Oryza nivara ONIVA07G00730 I 0.599
OGLUM03G32330 Oryza glumaepatula OGLUM03G32330 I 0.599
OBART07G01880 Oryza barthii OBART07G01880 I 0.599
OBART03G32690 Oryza barthii OBART03G32690 I 0.599
OB07G11590 Oryza brachyantha OB07G11590 I 0.599
OGLUM07G01740 Oryza glumaepatula OGLUM07G01740 I 0.599
OLONG_001151 Oryza longistaminata OLONG_001151 I 0.599
ONIVA03G34200 Oryza nivara ONIVA03G34200 I 0.599
OMERI07G01180 Oryza meridionalis OMERI07G01180 I 0.599
OMERI03G29420 Oryza meridionalis OMERI03G29420 I 0.599
OLONG_012157 Oryza longistaminata OLONG_012157 I 0.599
Solyc05g005090.2 Solanum lycopersicum Solyc05g005090.2 I 0.599