Cmyd_10004597 (Chelonia mydas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cmyd_10004597 T225666_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08197
M02064_2.00 		Caenorhabditis briggsae
NNDACDNN
NNHGTHNN		 PBM
Weirauch et al.(2014)
pTH6408 		0.636 0.643
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10004597 Homeodomain 206 264

Links

Other Homeodomain family TFs
Other Chelonia mydas TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG08197 Caenorhabditis briggsae CBG08197 D 0.636
CBN07279 Caenorhabditis brenneri CBN07279 I 0.636
CBN12980 Caenorhabditis brenneri CBN12980 I 0.636
CJA00344 Caenorhabditis japonica CJA00344 I 0.636
CRE09644 Caenorhabditis remanei CRE09644 I 0.636
csin107852 Clonorchis sinensis csin107852 I 0.642
ECANG7_08640 Echinococcus canadensis ECANG7_08640 I 0.628
HmN_000708300 Hymenolepis microstoma HmN_000708300 I 0.628
HNAJ_0000146901 Hymenolepis nana HNAJ_0000146901 I 0.628
T265_13435 Opisthorchis viverrini T265_13435 I 0.642
TASK_0000023001 Taenia asiatica TASK_0000023001 I 0.628
TsM_000262600 Taenia solium TsM_000262600 I 0.628
TTAC_0000065401 Hydatigera taeniaeformis TTAC_0000065401 I 0.628
irx-1 Caenorhabditis elegans WBGene00007984 I 0.636