CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSBTAP00000049813-D1 *(Bos grunniens)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	ENSBTAP00000049813-D1	T225896_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
DUXA M01247_2.00	Homo sapiens	NTGATTRNN	NNYAATCAN	PBM Lambert et al.(2019) pTH11226	0.785	0.768
DUXA M03244_2.00	Homo sapiens	NHRAYBYAATCAN	NTGATTRVRTYDN	SELEX Jolma et al.(2013) DUXA_1	0.785	0.768
DUXA M05402_2.00	Homo sapiens	TRAYBYAATCA	TGATTRVRTYA	SELEX Yin et al.(2017) DUXA_eDBD_HT-SELEX	0.785	0.768
DUXA M10756_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DUXA_02	0.785	0.768
DUXA M05403_2.00	Homo sapiens	YRAYBYAATCA	TGATTRVRTYR	SELEX Yin et al.(2017) DUXA_eDBD_Methyl-HT-SELEX	0.785	0.768
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSBTAP00000049813-D1	Homeodomain	25	79	RRSRTSFTEEQLKILVQAFSQNPYPGYTAKQRLAVEINAEESRIQIWFQNRRARH
ENSBTAP00000049813-D1	Homeodomain	108	164	RRCRTSFTSSQLQTLKNAFTENPYPGIDSREQLAEEIGVPESRVQIWFQNRRARLRV

Links
Other Homeodomain family TFs
Other *Bos grunniens* TFs