ENSBTAP00000049813-D5 (Bos grunniens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ENSBTAP00000049813-D5 T225897_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.632 0.148
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.632 0.148
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.632 0.148
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.632 0.148
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.618 0.261
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000049813-D5 Homeodomain 23 68
ENSBTAP00000049813-D5 Homeodomain 101 142

Links

Other Homeodomain family TFs
Other Bos grunniens TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I
29915.m000479 Ricinus communis 29915.m000479 I
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I
WRKY54 Arabidopsis thaliana AT2G40750 I
WRKY70 Arabidopsis thaliana AT3G56400 D
BGIOSGA000583 Oryza indica BGIOSGA000583 N
Bo00913s010 Brassica oleracea Bo00913s010 I
Bo3g035140 Brassica oleracea Bo3g035140 I
Bo4g012750 Brassica oleracea Bo4g012750 I
Bo4g190390 Brassica oleracea Bo4g190390 I
Bo6g071110 Brassica oleracea Bo6g071110 I
Bo8g090820 Brassica oleracea Bo8g090820 I
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I
Bra000203 Brassica rapa Bra000203 I
Bra003239 Brassica rapa Bra003239 I
Bra004586 Brassica rapa Bra004586 I
Bra007243 Brassica rapa Bra007243 I
Bra014692 Brassica rapa Bra014692 I
Bra016974 Brassica rapa Bra016974 I
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I
Cagra.0086s0001 Capsella grandiflora Cagra.0086s0001 I
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I
Carubv10001559m.g Capsella rubella Carubv10001559m.g I
Carubv10017349m.g Capsella rubella Carubv10017349m.g I
Carubv10024972m.g Capsella rubella Carubv10024972m.g I
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I
Ca_04100 Cicer arietinum Ca_04100 I
Ca_09495 Cicer arietinum Ca_09495 I
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I
Cla007424 Citrullus lanatus Cla007424 I
Cucsa.078810 Cucumis sativus Cucsa.078810 I
Cucsa.177060 Cucumis sativus Cucsa.177060 I
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I
F775_23296 Aegilops tauschii F775_23296 N
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I
GLYMA03G00460 Glycine max GLYMA03G00460 I
GLYMA04G40130 Glycine max GLYMA04G40130 I
GLYMA06G14720 Glycine max GLYMA06G14720 I
GLYMA09G41050 Glycine max GLYMA09G41050 I
GLYMA14G36430 Glycine max GLYMA14G36430 I
GLYMA14G36438 Glycine max GLYMA14G36438 I
GLYMA16G34590 Glycine max GLYMA16G34590 I
GLYMA18G44560 Glycine max GLYMA18G44560 I
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I
LPERR05G16160 Leersia perrieri LPERR05G16160 N
LPERR10G04210 Leersia perrieri LPERR10G04210 I
Lus10012870.g Linum usitatissimum Lus10012870.g I
Lus10029021.g Linum usitatissimum Lus10029021.g I
Lus10030517.g Linum usitatissimum Lus10030517.g I
Lus10034244.g Linum usitatissimum Lus10034244.g I
mgf000109m Mimulus guttatus mgf000109m I
mgf002542m Mimulus guttatus mgf002542m I
MLOC_3853 Hordeum vulgare MLOC_3853 N
MTR_3g093830 Medicago truncatula MTR_3g093830 I
MTR_5g067700 Medicago truncatula MTR_5g067700 I
MTR_7g073380 Medicago truncatula MTR_7g073380 I
MTR_7g073430 Medicago truncatula MTR_7g073430 I
OBART10G05920 Oryza barthii OBART10G05920 N
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N
OMERI10G04260 Oryza meridionalis OMERI10G04260 N
ONIVA01G40380 Oryza nivara ONIVA01G40380 N
OPUNC01G34290 Oryza punctata OPUNC01G34290 N
OPUNC10G05310 Oryza punctata OPUNC10G05310 N
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I
PK03324.1 Cannabis sativa PK03324.1 I
PK21378.1 Cannabis sativa PK21378.1 I
Pm019286 Prunus mume Pm019286 I
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I
Sb08g005080 Sorghum bicolor Sb08g005080 I
Si022702m.g Setaria italica Si022702m.g I
Si028270m.g Setaria italica Si028270m.g N
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I
TCM_045556 Theobroma cacao TCM_045556 I
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I
Thhalv10016713m.g Eutrema salsugineum Thhalv10016713m.g I
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I