CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSP00000362573-D1 *(Bos grunniens)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	ENSP00000362573-D1	T226087_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Lmx1a M00432_2.00	Mus musculus	NNDATKRN	NYMATHNN	PBM Berger et al.(2008) Lmx1a_2238	0.867	1.000
Lmx1b M00482_2.00	Mus musculus	NDADDRN	NYHHTHN	PBM Berger et al.(2008) Lmx1b_3433	0.867	1.000
LMX1A M03179_2.00	Homo sapiens	NTAATTAV	BTAATTAN	SELEX Jolma et al.(2013) LMX1A_1	0.867	1.000
LMX1B M03153_2.00	Homo sapiens	NTWATTRN	NYAATWAN	SELEX Jolma et al.(2013) LMX1B_1	0.867	1.000
LMX1B M03154_2.00	Homo sapiens	DTAATTRV	BYAATTAH	SELEX Jolma et al.(2013) LMX1B_2	0.867	1.000
LMX1A M05215_2.00	Homo sapiens	YTAATTAV	BTAATTAR	SELEX Yin et al.(2017) LMX1A_eDBD_HT-SELEX	0.867	1.000
LMX1B M05153_2.00	Homo sapiens	NNNBTAATTAN	NTAATTAVNNN	SELEX Yin et al.(2017) LMX1B_eDBD_HT-SELEX	0.867	1.000
LMX1B M05156_2.00	Homo sapiens	NDDTTAATTAH	DTAATTAAHHN	SELEX Yin et al.(2017) LMX1B_FL_HT-SELEX	0.867	1.000
LMX1A M05216_2.00	Homo sapiens	DTAAYGHN	NDCRTTAH	SELEX Yin et al.(2017) LMX1A_eDBD_Methyl-HT-SELEX_1	0.867	1.000
LMX1A M05217_2.00	Homo sapiens	YTAATTRN	NYAATTAR	SELEX Yin et al.(2017) LMX1A_eDBD_Methyl-HT-SELEX_2	0.867	1.000
LMX1B M05154_2.00	Homo sapiens	NNNBYAATTRN	NYAATTRVNNN	SELEX Yin et al.(2017) LMX1B_eDBD_Methyl-HT-SELEX_1	0.867	1.000
LMX1B M05155_2.00	Homo sapiens	WTAAYGAR	YTCRTTAW	SELEX Yin et al.(2017) LMX1B_eDBD_Methyl-HT-SELEX_2	0.867	1.000
LMX1B M05157_2.00	Homo sapiens	TTAACGAG	CTCGTTAA	SELEX Yin et al.(2017) LMX1B_FL_Methyl-HT-SELEX_1	0.867	1.000
LMX1B M05158_2.00	Homo sapiens	NWWTTAATTAW	WTAATTAAWWN	SELEX Yin et al.(2017) LMX1B_FL_Methyl-HT-SELEX_2	0.867	1.000
CG32105 M03873_2.00	Drosophila melanogaster	KTAATTAR	YTAATTAM	SELEX Nitta et al.(2015) CG32105_1	0.839	0.842
CG32105 M06546_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0178.1	0.839	0.842
CG32105 M06368_2.00	Drosophila melanogaster	WYTAATTAV	BTAATTARW	B1H Zhu et al.(2011) CG32105_Cell_FBgn0052105	0.839	0.842
CG32105 M06369_2.00	Drosophila melanogaster	NNTWATTR	YAATWANN	B1H Zhu et al.(2011) CG32105_SOLEXA_FBgn0052105	0.839	0.842
SNAPOd2T00003340001 M02228_2.00	Oikopleura dioica	NNNTAATWWN	NWWATTANNN	PBM Weirauch et al.(2014) pTH6369	0.819	0.754
CG4328 M06538_2.00	Drosophila melanogaster	WTWATTR	YAATWAW	B1H Mathelier et al.(2014) MA0182.1	0.813	0.860
CG4328 M06352_2.00	Drosophila melanogaster	NWWWATTR	YAATWWWN	B1H Zhu et al.(2011) CG4328_Cell_FBgn0036274	0.813	0.860
CG4328 M06353_2.00	Drosophila melanogaster	YAATWANN	NNTWATTR	B1H Zhu et al.(2011) CG4328_SOLEXA_FBgn0036274	0.813	0.860
Lhx4 M00430_2.00	Mus musculus	NYAATHN	NDATTRN	PBM Berger et al.(2008) Lhx4_1719	0.715	0.579
Lhx3 M00435_2.00	Mus musculus	NNNYAATHW	WDATTRNNN	PBM Berger et al.(2008) Lhx3_3431	0.715	0.579
Lhx4 M03257_2.00	Mus musculus	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) Lhx4_1	0.715	0.579
LHX4 M05063_2.00	Homo sapiens	BYAATYRV	BYRATTRV	SELEX Yin et al.(2017) LHX4_eDBD_HT-SELEX	0.715	0.579
LHX4 M05066_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) LHX4_FL_HT-SELEX	0.715	0.579
Lhx3 M02687_2.00	Mus musculus	VRWTAATTAATTW	WAATTAATTAWYB	SELEX Mathelier et al.(2014) MA0135.1	0.715	0.579
LHX3 M09137_2.00	Homo sapiens	NYTAATTAAWTHH	DDAWTTAATTARN	Misc Kulakovskiy et al.(2013) LHX3_HUMAN.H11MO.0.C	0.715	0.579
Lhx3 M09188_2.00	Mus musculus	NYTRATKRV	BYMATYARN	Misc Kulakovskiy et al.(2013) LHX3_MOUSE.H11MO.0.C	0.715	0.579
Lhx3 M09570_2.00	Mus musculus	NNBTAATTAV	BTAATTAVNN	Misc Heinz et al.(2010) Neuron-Lhx3_GSE31456	0.715	0.579
LHX3 M10657_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX3A_01	0.715	0.579
LHX3 M10658_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX3b_01	0.715	0.579
LHX3 M10659_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX3_Q3	0.715	0.579
LHX4 M05064_2.00	Homo sapiens	BYAATTRV	BYAATTRV	SELEX Yin et al.(2017) LHX4_eDBD_Methyl-HT-SELEX_1	0.715	0.579
LHX4 M05065_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) LHX4_eDBD_Methyl-HT-SELEX_2	0.715	0.579
LHX4 M05067_2.00	Homo sapiens	NYAATTRN	NYAATTRN	SELEX Yin et al.(2017) LHX4_FL_Methyl-HT-SELEX_1	0.715	0.579
LHX4 M05068_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) LHX4_FL_Methyl-HT-SELEX_2	0.715	0.579
zfh-2 M01850_2.00	Caenorhabditis elegans	NYTAATTARNN	NNYTAATTARN	PBM Weirauch et al.(2014) pTH6132	0.707	0.491
zfhx4 M02108_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5654	0.707	0.491
Otp M00417_2.00	Mus musculus	NNHAATND	HNATTDNN	PBM Berger et al.(2008) Otp_3496	0.704	0.474
Lim3 M02116_2.00	Drosophila melanogaster	NNNNNATBRN	NYVATNNNNN	PBM Weirauch et al.(2014) pTH6478	0.703	0.561
Lim3 M03796_2.00	Drosophila melanogaster	BTAATTAV	BTAATTAV	SELEX Nitta et al.(2015) Lim3_1	0.703	0.561
Lim3 M06492_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0195.1	0.703	0.561
Lim3 M06258_2.00	Drosophila melanogaster	HHTAATKA	TMATTADD	B1H Zhu et al.(2011) Lim3_Cell_FBgn0002023	0.703	0.561
Lim3 M06259_2.00	Drosophila melanogaster	HTRATTR	YAATYAD	B1H Zhu et al.(2011) Lim3_SOLEXA_FBgn0002023	0.703	0.561
otp M03834_2.00	Drosophila melanogaster	BTAATTRN	NYAATTAV	SELEX Nitta et al.(2015) otp_1	0.700	0.439
otp M03835_2.00	Drosophila melanogaster	YTAATTRV	BYAATTAR	SELEX Nitta et al.(2015) otp_2	0.700	0.439
otp M06516_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0236.1	0.700	0.439
otp M06309_2.00	Drosophila melanogaster	HYTAATTA	TAATTARD	B1H Zhu et al.(2011) Otp_Cell_FBgn0015524	0.700	0.439
otp M06310_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Otp_SOLEXA_FBgn0015524	0.700	0.439
C4B866_NEMVE M02052_2.00	Nematostella vectensis	NNTTAATTARNN	NNYTAATTAANN	PBM Weirauch et al.(2014) pTH6176	0.693	0.491
VSX2 M00287_2.00	Homo sapiens	NYTAATTARN	NYTAATTARN	PBM Barrera et al.(2016) VSX2_REF	0.690	0.421
VSX2 M03124_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX2_1	0.690	0.421
VSX2 M05036_2.00	Homo sapiens	CTAATTAN	NTAATTAG	SELEX Yin et al.(2017) VSX2_eDBD_HT-SELEX	0.690	0.421
VSX2 M05039_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_HT-SELEX	0.690	0.421
Vsx2 M09180_2.00	Mus musculus	NNRGCTAATTAR	YTAATTAGCYNN	Misc Kulakovskiy et al.(2013) VSX2_MOUSE.H11MO.0.C	0.690	0.421
VSX2 M10676_2.00	Homo sapiens	HNNGCTAATTANBN	NVNTAATTAGCNND	Transfac Matys et al.(2006) V$CHX10_01	0.690	0.421
VSX2 M05037_2.00	Homo sapiens	VYAATTRR	YYAATTRB	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_1	0.690	0.421
VSX2 M05038_2.00	Homo sapiens	NTAAYKHN	NDMRTTAN	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_2	0.690	0.421
VSX2 M05040_2.00	Homo sapiens	NTAAYKVN	NBMRTTAN	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_1	0.690	0.421
VSX2 M05041_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_2	0.690	0.421
VSX2 M00285_2.00	Homo sapiens	NDTWTATTHNNN	NNNDAATAWAHN	PBM Barrera et al.(2016) VSX2_R200P	0.690	0.404
VSX2 M00286_2.00	Homo sapiens	YRWKWNN	NNWMWYR	PBM Barrera et al.(2016) VSX2_R200Q	0.690	0.404
LHX2 M02085_2.00	Homo sapiens	NNNYAAHDDN	NHHDTTRNNN	PBM Weirauch et al.(2014) pTH5812	0.682	0.456
Lhx2 M00380_2.00	Mus musculus	NTAATKRN	NYMATTAN	PBM Berger et al.(2008) Lhx2_0953	0.682	0.456
Lhx9 M00406_2.00	Mus musculus	NTAATDRN	NYHATTAN	PBM Berger et al.(2008) Lhx9_3492	0.682	0.456
LHX2 M03106_2.00	Homo sapiens	NNTAATTAGN	NCTAATTANN	SELEX Jolma et al.(2013) LHX2_1	0.682	0.456
LHX2 M03107_2.00	Homo sapiens	YAATTANVCTAATTR	YAATTAGBNTAATTR	SELEX Jolma et al.(2013) LHX2_2	0.682	0.456
LHX9 M03163_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) LHX9_1	0.682	0.456
LHX9 M03164_2.00	Homo sapiens	TAATTRGYMATTA	TAATKRCYAATTA	SELEX Jolma et al.(2013) LHX9_2	0.682	0.456
LHX9 M05170_2.00	Homo sapiens	YTAATTRG	CYAATTAR	SELEX Yin et al.(2017) LHX9_eDBD_HT-SELEX	0.682	0.456
LHX9 M05173_2.00	Homo sapiens	NTAATTRG	CYAATTAN	SELEX Yin et al.(2017) LHX9_FL_HT-SELEX	0.682	0.456
LHX2 M09136_2.00	Homo sapiens	NBYTAATTRVNB	VNBYAATTARVN	Misc Kulakovskiy et al.(2013) LHX2_HUMAN.H11MO.0.A	0.682	0.456
Lhx2 M09169_2.00	Mus musculus	NNTAATKRGN	NCYMATTANN	Misc Kulakovskiy et al.(2013) LHX2_MOUSE.H11MO.0.A	0.682	0.456
Lhx2 M09562_2.00	Mus musculus	NYTAATTA	TAATTARN	Misc Heinz et al.(2010) HFSC-Lhx2_GSE48068	0.682	0.456
LHX2 M10655_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX2_Q4	0.682	0.456
LHX2 M10656_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX2_Q6	0.682	0.456
LHX9 M05171_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) LHX9_eDBD_Methyl-HT-SELEX_1	0.682	0.456
LHX9 M05172_2.00	Homo sapiens	HTAACGAB	VTCGTTAD	SELEX Yin et al.(2017) LHX9_eDBD_Methyl-HT-SELEX_2	0.682	0.456
LHX9 M05174_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) LHX9_FL_Methyl-HT-SELEX_1	0.682	0.456
LHX9 M05175_2.00	Homo sapiens	HTAACGAB	VTCGTTAD	SELEX Yin et al.(2017) LHX9_FL_Methyl-HT-SELEX_2	0.682	0.456
Alx3 M00402_2.00	Mus musculus	WAATNDN	NHNATTW	PBM Berger et al.(2008) Alx3_3418	0.681	0.421
ALX3 M03172_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_1	0.681	0.421
ALX3 M03173_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_2	0.681	0.421
ALX3 M03174_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ALX3_3	0.681	0.421
ALX3 M05195_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_HT-SELEX	0.681	0.421
ALX3 M05198_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_HT-SELEX	0.681	0.421
ALX3 M05196_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_1	0.681	0.421
ALX3 M05197_2.00	Homo sapiens	NTAAYBHN	NDVRTTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_2	0.681	0.421
ALX3 M05199_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_1	0.681	0.421
ALX3 M05200_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_2	0.681	0.421
ap M06478_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0209.1	0.680	0.439
ap M06214_2.00	Drosophila melanogaster	VYTAATKA	TMATTARB	B1H Zhu et al.(2011) Ap_Cell_FBgn0000099	0.680	0.439
ap M06215_2.00	Drosophila melanogaster	BAATHA	TDATTV	B1H Zhu et al.(2011) ap_FlyReg_FBgn0000099	0.680	0.439
ap M06216_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Ap_SOLEXA_FBgn0000099	0.680	0.439
ap M10781_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$AP_Q6	0.680	0.439
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.679	0.421
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.679	0.421
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.679	0.421
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.679	0.421
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.679	0.421
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.679	0.421
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.679	0.421
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.679	0.421
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.679	0.421
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.679	0.421
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.679	0.421
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.679	0.421
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.679	0.421
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.679	0.421
vsx2 M02079_2.00	Danio rerio	NNYTAATTARN	NYTAATTARNN	PBM Weirauch et al.(2014) pTH6221	0.678	0.404
Alx1 M00471_2.00	Mus musculus	NTAATTRN	NYAATTAN	PBM Berger et al.(2008) Cart1_0997	0.677	0.439
Alx1 M00472_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Cart1_1275	0.677	0.439
ALX1 M03226_2.00	Homo sapiens	NTAATTRVRTTAN	NTAAYBYAATTAN	SELEX Jolma et al.(2013) CART1_1	0.677	0.439
Alx1 M03272_2.00	Mus musculus	NNTAATTRRD	HYYAATTANN	SELEX Jolma et al.(2013) Alx1_1	0.677	0.439
Alx1 M03273_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx1_2	0.677	0.439
CG32532 M03874_2.00	Drosophila melanogaster	NTAAYBNVRTTAN	NTAAYBNVRTTAN	SELEX Nitta et al.(2015) CG32532_1	0.677	0.439
ALX1 M05327_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_HT-SELEX	0.677	0.439
CG32532 M06547_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0179.1	0.677	0.439
CG32532 M06370_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG32532_Cell_FBgn0052532	0.677	0.439
CG32532 M06371_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG32532_SOLEXA_FBgn0052532	0.677	0.439
ALX1 M09160_2.00	Homo sapiens	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_HUMAN.H11MO.0.B	0.677	0.439
Alx1 M09201_2.00	Mus musculus	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_MOUSE.H11MO.0.B	0.677	0.439
ALX1 M10741_2.00	Homo sapiens	VVHTAATKNNHATTABYN	NRVTAATDNNMATTADBB	Transfac Matys et al.(2006) V$CART1_01	0.677	0.439
ALX1 M05328_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_Methyl-HT-SELEX	0.677	0.439
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.677	0.421
Alx4 M00487_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Alx4_1744	0.677	0.421
ALX4 M03079_2.00	Homo sapiens	NTAATYNRRTTAN	NTAAYYNRATTAN	SELEX Jolma et al.(2013) ALX4_1	0.677	0.421
Alx4 M03278_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx4_1	0.677	0.421
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.677	0.421
ALX4 M04917_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_HT-SELEX	0.677	0.421
ALX4 M10637_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ALX4_01	0.677	0.421
ALX4 M04918_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_1	0.677	0.421
ALX4 M04919_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_2	0.677	0.421
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.677	0.404
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.677	0.404
Sebox M02097_2.00	Mus musculus	NHTTAATTAN	NTAATTAADN	PBM Weirauch et al.(2014) pTH6379	0.677	0.386
hbn M03813_2.00	Drosophila melanogaster	HTAATYTAATTAD	HTAATTARATTAD	SELEX Nitta et al.(2015) hbn_1	0.676	0.456
hbn M06506_2.00	Drosophila melanogaster	TTAATTR	YAATTAA	B1H Mathelier et al.(2014) MA0226.1	0.676	0.456
hbn M06291_2.00	Drosophila melanogaster	TWAWTTR	YAAWTWA	B1H Zhu et al.(2011) Hbn_Cell_FBgn0008636	0.676	0.456
hbn M06292_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Hbn_SOLEXA_FBgn0008636	0.676	0.456
Pph13 M03845_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Pph13_1	0.675	0.404
Pph13 M06522_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Mathelier et al.(2014) MA0200.1	0.675	0.404
Pph13 M06321_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Pph13_Cell_FBgn0023489	0.675	0.404
Pph13 M06322_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Pph13_SOLEXA_FBgn0023489	0.675	0.404
al M03776_2.00	Drosophila melanogaster	TAAYBNVRTTA	TAAYBNVRTTA	SELEX Nitta et al.(2015) al_1	0.673	0.404
al M06477_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0208.1	0.673	0.404
al M06212_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) Al_Cell_FBgn0000061	0.673	0.404
al M06213_2.00	Drosophila melanogaster	NNYTAATTR	YAATTARNN	B1H Zhu et al.(2011) Al_SOLEXA_FBgn0000061	0.673	0.404
SNAPOd2T00006620001 M02231_2.00	Oikopleura dioica	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5666	0.672	0.456
CG5369 M03876_2.00	Drosophila melanogaster	TAATTHVATTA	TAATBDAATTA	SELEX Nitta et al.(2015) CG5369_1	0.672	0.439
CG5369 M03877_2.00	Drosophila melanogaster	TAATTRNNTAATBN	NVATTANNYAATTA	SELEX Nitta et al.(2015) CG5369_2	0.672	0.439
CG5369 M03878_2.00	Drosophila melanogaster	TAATTVRATWA	TWATYBAATTA	SELEX Nitta et al.(2015) CG5369_3	0.672	0.439
inv M06491_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Mathelier et al.(2014) MA0229.1	0.672	0.404
inv M06255_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Zhu et al.(2011) Inv_Cell_FBgn0001269	0.672	0.404
inv M06256_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_2_FBgn0001269	0.672	0.404
inv M06257_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_5_FBgn0001269	0.672	0.404
en M03793_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) en_1	0.672	0.386
en M06485_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0220.1	0.672	0.386
en M06236_2.00	Drosophila melanogaster	NYTAATTR	YAATTARN	B1H Zhu et al.(2011) En_Cell_FBgn0000577	0.672	0.386
en M06237_2.00	Drosophila melanogaster	DBTAATKR	YMATTAVH	B1H Zhu et al.(2011) en_FlyReg_FBgn0000577	0.672	0.386
en M06238_2.00	Drosophila melanogaster	NNNTAATTRN	NYAATTANNN	B1H Zhu et al.(2011) en_SOLEXA_2_FBgn0000577	0.672	0.386
en M06239_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Zhu et al.(2011) En_SOLEXA_FBgn0000577	0.672	0.386
en M09677_2.00	Drosophila melanogaster	HTAATTRN	NYAATTAD	Misc Kulakovskiy et al.(2009) en	0.672	0.386
en M10785_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EN_Q6	0.672	0.386
SHOX M02095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5805	0.671	0.421
Shox2 M00439_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Shox2_2641	0.671	0.421
SHOX M03232_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) SHOX_1	0.671	0.421
SHOX2 M03204_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) SHOX2_1	0.671	0.421
Shox2 M03263_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Shox2_1	0.671	0.421
SHOX M05366_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_HT-SELEX	0.671	0.421
Shox2 M10772_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SHOX2_05	0.671	0.421
SHOX M05367_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_1	0.671	0.421
SHOX M05368_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_2	0.671	0.421
En1 M00519_2.00	Mus musculus	HNWTNNN	NNNAWND	PBM Berger et al.(2008) En1_3123	0.671	0.439
EN1 M03180_2.00	Homo sapiens	NNTAATTRVB	VBYAATTANN	SELEX Jolma et al.(2013) EN1_1	0.671	0.439
EN1 M03181_2.00	Homo sapiens	TAATTRSNYAATTA	TAATTRNSYAATTA	SELEX Jolma et al.(2013) EN1_2	0.671	0.439
EN1 M03182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) EN1_3	0.671	0.439
EN1 M03183_2.00	Homo sapiens	TDAKKRSNYMATTA	TAATKRNSYMMTHA	SELEX Jolma et al.(2013) EN1_4	0.671	0.439
EN1 M05218_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_HT-SELEX	0.671	0.439
EN1 M05871_2.00	Homo sapiens	VNYAATTA	TAATTRNB	SMiLE-seq Isakova et al.(2017) EN1	0.671	0.439
EN1 M10714_2.00	Homo sapiens	RTDDTBB	VVAHHAY	Transfac Matys et al.(2006) V$EN1_01	0.671	0.439
EN1 M05219_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_1	0.671	0.439
EN1 M05220_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_2	0.671	0.439
En2 M00484_2.00	Mus musculus	NNYHATHN	NDATDRNN	PBM Berger et al.(2008) En2_0952	0.671	0.421
EN2 M03189_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) EN2_1	0.671	0.421
EN2 M03190_2.00	Homo sapiens	VBTAATTRNN	NNYAATTAVB	SELEX Jolma et al.(2013) EN2_2	0.671	0.421
En2 M03276_2.00	Mus musculus	VBTAATTASN	NSTAATTAVB	SELEX Jolma et al.(2013) En2_1	0.671	0.421
EN2 M05237_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_HT-SELEX	0.671	0.421
EN2 M05238_2.00	Homo sapiens	VHTDAYGHB	VDCRTHADB	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_1	0.671	0.421
EN2 M05239_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_2	0.671	0.421
PROP1 M00316_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) PROP1_R99Q	0.671	0.404
DRGX M03199_2.00	Homo sapiens	NTAATTNRATTAN	NTAATYNAATTAN	SELEX Jolma et al.(2013) DRGX_1	0.671	0.456
DRGX M05253_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_HT-SELEX	0.671	0.456
Drgx M10774_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRXL1_01	0.671	0.456
DRGX M05254_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_Methyl-HT-SELEX	0.671	0.456
Uncx M00443_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Uncx4	0.671	0.421
uncx M02111_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5474	0.671	0.421
UNCX M03191_2.00	Homo sapiens	NWAATTVVRTHWN	NWDAYBBAATTWN	SELEX Jolma et al.(2013) UNCX_1	0.671	0.421
UNCX M03192_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) UNCX_2	0.671	0.421
Uncx M03264_2.00	Mus musculus	NTAATTVRATTAN	NTAATYBAATTAN	SELEX Jolma et al.(2013) Uncx_1	0.671	0.421
Uncx M03265_2.00	Mus musculus	NTAATTRR	YYAATTAN	SELEX Jolma et al.(2013) Uncx_2	0.671	0.421
CG2808 M03875_2.00	Drosophila melanogaster	TAATYNSRTTA	TAAYSNRATTA	SELEX Nitta et al.(2015) CG2808_1	0.671	0.421
UNCX M05240_2.00	Homo sapiens	NYAATTRV	BYAATTRN	SELEX Yin et al.(2017) UNCX_eDBD_HT-SELEX	0.671	0.421
UNCX M05241_2.00	Homo sapiens	NYRRYKNN	NNMRYYRN	SELEX Yin et al.(2017) UNCX_eDBD_Methyl-HT-SELEX	0.671	0.421
ARX M00264_2.00	Homo sapiens	NNWRATNNN	NNNATYWNN	PBM Barrera et al.(2016) ARX_REF	0.671	0.404
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.671	0.404
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.671	0.404
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.671	0.404
Arx M00467_2.00	Mus musculus	NTAATTDN	NHAATTAN	PBM Berger et al.(2008) Arx_1738	0.671	0.404
ARX M03076_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ARX_1	0.671	0.404
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.671	0.404
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.671	0.404
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.671	0.404
Arx M03269_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Arx_1	0.671	0.404
ARX M04895_2.00	Homo sapiens	BTAATTRR	YYAATTAV	SELEX Yin et al.(2017) ARX_eDBD_HT-SELEX	0.671	0.404
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.671	0.404
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.671	0.404
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.671	0.404
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.671	0.404
Arx M10775_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARX_05	0.671	0.404
ARX M00260_2.00	Homo sapiens	NMTAATTANNN	NNNTAATTAKN	PBM Barrera et al.(2016) ARX_L343Q	0.671	0.404
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.671	0.404
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.671	0.404
ARX M04896_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ARX_eDBD_Methyl-HT-SELEX	0.671	0.404
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.671	0.404
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.671	0.404
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.671	0.404
repo M03826_2.00	Drosophila melanogaster	VTTAATTARB	VYTAATTAAB	SELEX Nitta et al.(2015) repo_1	0.671	0.439
repo M03827_2.00	Drosophila melanogaster	VKYAATTRRN	NYYAATTRMB	SELEX Nitta et al.(2015) repo_2	0.671	0.439
repo M03828_2.00	Drosophila melanogaster	VBYAATTRVNNBYAATTRVB	VBYAATTRVNNBYAATTRVB	SELEX Nitta et al.(2015) repo_3	0.671	0.439
repo M06511_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0240.1	0.671	0.439
repo M06301_2.00	Drosophila melanogaster	DTTAATTA	TAATTAAH	B1H Zhu et al.(2011) Repo_Cell_FBgn0011701	0.671	0.439
repo M06302_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Repo_SOLEXA_FBgn0011701	0.671	0.439
ARX M00261_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) ARX_P353L	0.671	0.386
ARX M00262_2.00	Homo sapiens	ATAATTAT	ATAATTAT	PBM Barrera et al.(2016) ARX_P353R	0.671	0.386
ISX M00319_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_REF	0.667	0.421
Isx M00452_2.00	Mus musculus	NNHDATNN	NNATHDNN	PBM Berger et al.(2008) Isx_3445	0.667	0.421
ISX M03218_2.00	Homo sapiens	NTAATTARATTAN	NTAATYTAATTAN	SELEX Jolma et al.(2013) ISX_1	0.667	0.421
ISX M03219_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Jolma et al.(2013) ISX_2	0.667	0.421
ISX M03220_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) ISX_3	0.667	0.421
ISX M05304_2.00	Homo sapiens	BTAATTRG	CYAATTAV	SELEX Yin et al.(2017) ISX_eDBD_HT-SELEX	0.667	0.421
ISX M05307_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_HT-SELEX	0.667	0.421
ISX M00318_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_R83Q	0.667	0.421
ISX M05305_2.00	Homo sapiens	NTAATTAG	CTAATTAN	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_1	0.667	0.421
ISX M05306_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_2	0.667	0.421
ISX M05308_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_1	0.667	0.421
ISX M05309_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_2	0.667	0.421
CG11294 M03855_2.00	Drosophila melanogaster	TAATTVVATTA	TAATBBAATTA	SELEX Nitta et al.(2015) CG11294_1	0.666	0.439
CG11294 M03856_2.00	Drosophila melanogaster	TAATTDVATTA	TAATBHAATTA	SELEX Nitta et al.(2015) CG11294_2	0.666	0.439
CG11294 M06531_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0172.1	0.666	0.439
CG11294 M06337_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) CG11294_Cell_FBgn0030058	0.666	0.439
CG11294 M06338_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG11294_SOLEXA_FBgn0030058	0.666	0.439
PHDP M03849_2.00	Drosophila melanogaster	NTAATKNVATTAN	NTAATBNMATTAN	SELEX Nitta et al.(2015) PHDP_1	0.666	0.386
PHDP M06525_2.00	Drosophila melanogaster	HTAATTD	HAATTAD	B1H Mathelier et al.(2014) MA0457.1	0.666	0.386
PHDP M06325_2.00	Drosophila melanogaster	HTAATT	AATTAD	B1H Zhu et al.(2011) PhdP_Cell_FBgn0025334	0.666	0.386
PHDP M06326_2.00	Drosophila melanogaster	YTAATT	AATTAR	B1H Zhu et al.(2011) PhdP_SOLEXA_FBgn0025334	0.666	0.386
VSX1 M00267_2.00	Homo sapiens	NNHAAYNNN	NNNRTTDNN	PBM Barrera et al.(2016) VSX1_Q175H	0.665	0.386
Vsx2 M02130_2.00	Drosophila melanogaster	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6195	0.656	0.386
Vsx2 M03880_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Vsx2_1	0.656	0.386
Vsx2 M03881_2.00	Drosophila melanogaster	HRAYNVNNTRATKD	HMATYANNBNRTYD	SELEX Nitta et al.(2015) Vsx2_2	0.656	0.386
Vsx2 M06553_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Mathelier et al.(2014) MA0180.1	0.656	0.386
Vsx2 M06382_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Zhu et al.(2011) CG33980_Cell_FBgn0053980	0.656	0.386
Vsx2 M06383_2.00	Drosophila melanogaster	NNTAATTRRN	NYYAATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_0_FBgn0053980	0.656	0.386
Vsx2 M06384_2.00	Drosophila melanogaster	NNTAATKDN	NHMATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_10_FBgn0053980	0.656	0.386
Vsx2 M06385_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) CG33980_SOLEXA_FBgn0053980	0.656	0.386
MIXL1 M03231_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) MIXL1_1	0.655	0.386
MIXL1 M05359_2.00	Homo sapiens	TAATBNVATTA	TAATBNVATTA	SELEX Yin et al.(2017) MIXL1_FL_HT-SELEX	0.655	0.386
MIXL1 M10747_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_02	0.655	0.386
Mixl1 M10765_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_03	0.655	0.386
MIXL1 M05360_2.00	Homo sapiens	TAATYNRATTA	TAATYNRATTA	SELEX Yin et al.(2017) MIXL1_FL_Methyl-HT-SELEX_1	0.655	0.386
MIXL1 M05361_2.00	Homo sapiens	TAATYDCRTTA	TAAYGHRATTA	SELEX Yin et al.(2017) MIXL1_FL_Methyl-HT-SELEX_2	0.655	0.386
RAX2 M03214_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) RAXL1_1	0.653	0.456
Rax M00426_2.00	Mus musculus	NNTAATTRN	NYAATTANN	PBM Berger et al.(2008) Rax_3443	0.653	0.439
RAX M03149_2.00	Homo sapiens	NHTAATTRNN	NNYAATTADN	SELEX Jolma et al.(2013) RAX_1	0.653	0.439
Rx M03840_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) Rx_1	0.653	0.439
Rx M03841_2.00	Drosophila melanogaster	NTAATBNSATTAN	NTAATSNVATTAN	SELEX Nitta et al.(2015) Rx_2	0.653	0.439
RAX M05142_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_HT-SELEX	0.653	0.439
Rx M06520_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0202.1	0.653	0.439
Rx M06317_2.00	Drosophila melanogaster	VYTAATTR	YAATTARB	B1H Zhu et al.(2011) Rx_Cell_FBgn0020617	0.653	0.439
Rx M06318_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Rx_SOLEXA_FBgn0020617	0.653	0.439
Rax M10773_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RAX_04	0.653	0.439
RAX M05143_2.00	Homo sapiens	NTAAYRNN	NNYRTTAN	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_1	0.653	0.439
RAX M05144_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_2	0.653	0.439
ENSCING00000016045 M02078_2.00	Ciona intestinalis	NNYTAATTRGN	NCYAATTARNN	PBM Weirauch et al.(2014) pTH6551	0.653	0.351
ZFHX2 M02089_2.00	Homo sapiens	NNTRATYANN	NNTRATYANN	PBM Weirauch et al.(2014) pTH5642	0.652	0.421
Q0N4F9_NEMVE M02162_2.00	Nematostella vectensis	DTAATTAK	MTAATTAH	PBM Weirauch et al.(2014) pTH6150	0.650	0.404
Prrx2 M00486_2.00	Mus musculus	WRATNNN	NNNATYW	PBM Berger et al.(2008) Prrx2_3072	0.650	0.439
PRRX2 M03200_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX2_1	0.650	0.439
Prrx2 M03277_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Prrx2_1	0.650	0.439
CG9876 M03865_2.00	Drosophila melanogaster	SVTVATBRSN	NSYVATBABS	SELEX Nitta et al.(2015) CG9876_1	0.650	0.439
CG9876 M03866_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) CG9876_2	0.650	0.439
CG9876 M03867_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) CG9876_3	0.650	0.439
CG9876 M03868_2.00	Drosophila melanogaster	TAATTRVNTAATTR	YAATTANBYAATTA	SELEX Nitta et al.(2015) CG9876_4	0.650	0.439
PRRX2 M05262_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PRRX2_FL_HT-SELEX	0.650	0.439
PRRX2 M05258_2.00	Homo sapiens	NTNAYGHN	NDCRTNAN	SELEX Yin et al.(2017) PRRX2_eDBD_HT-SELEX_1	0.650	0.439
PRRX2 M05259_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PRRX2_eDBD_HT-SELEX_2	0.650	0.439
CG9876 M06537_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0184.1	0.650	0.439
CG9876 M06350_2.00	Drosophila melanogaster	DBTAATTR	YAATTAVH	B1H Zhu et al.(2011) CG9876_Cell_FBgn0034821	0.650	0.439
CG9876 M06351_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG9876_SOLEXA_FBgn0034821	0.650	0.439
PRRX2 M09156_2.00	Homo sapiens	HTAATTR	YAATTAD	Misc Kulakovskiy et al.(2013) PRRX2_HUMAN.H11MO.0.C	0.650	0.439
Prrx2 M09207_2.00	Mus musculus	HTAATTR	YAATTAD	Misc Kulakovskiy et al.(2013) PRRX2_MOUSE.H11MO.0.C	0.650	0.439
PRRX2 M10735_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRX2_05	0.650	0.439
PRRX2 M10776_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRX2_Q2	0.650	0.439
Prrx2 M10767_2.00	Mus musculus	HNVHTAATTRRNHNDW	WHNDNYYAATTADBND	Transfac Matys et al.(2006) V$S8_01	0.650	0.439
PRRX2 M05260_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) PRRX2_eDBD_Methyl-HT-SELEX_1	0.650	0.439
PRRX2 M05261_2.00	Homo sapiens	NTAATYRN	NYRATTAN	SELEX Yin et al.(2017) PRRX2_eDBD_Methyl-HT-SELEX_2	0.650	0.439
PRRX2 M05263_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) PRRX2_FL_Methyl-HT-SELEX_1	0.650	0.439
PRRX2 M05264_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) PRRX2_FL_Methyl-HT-SELEX_2	0.650	0.439
Prrx1 M00431_2.00	Mus musculus	TAATTRNN	NNYAATTA	PBM Berger et al.(2008) Prrx1_3442	0.650	0.421
PRRX1 M03120_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX1_1	0.650	0.421
PRRX1 M03121_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX1_2	0.650	0.421
PRRX1 M03122_2.00	Homo sapiens	TAATTVRRTTA	TAAYYBAATTA	SELEX Jolma et al.(2013) PRRX1_3	0.650	0.421
Prrx1 M10770_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PMX1_01	0.650	0.421
PRRX1 M10675_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PMX1_Q6	0.650	0.421
ESX1 M00292_2.00	Homo sapiens	NNTAATNDN	NHNATTANN	PBM Barrera et al.(2016) ESX1_REF	0.649	0.439
ESX1 M03137_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_1	0.649	0.439
ESX1 M03138_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_2	0.649	0.439
ESX1 M05087_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_HT-SELEX	0.649	0.439
ESX1 M05089_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_FL_HT-SELEX	0.649	0.439
ESX1 M05088_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_Methyl-HT-SELEX	0.649	0.439
ESX1 M05090_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_FL_Methyl-HT-SELEX	0.649	0.439
Awh M02121_2.00	Drosophila melanogaster	NNTAATTANN	NNTAATTANN	PBM Weirauch et al.(2014) pTH5759	0.646	0.491
Awh M03831_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) Awh_1	0.646	0.491
Awh M06513_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0167.1	0.646	0.491
Awh M06303_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Zhu et al.(2011) Awh_Cell_FBgn0013751	0.646	0.491
Awh M06304_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Awh_SOLEXA_FBgn0013751	0.646	0.491
lim-4 M02182_2.00	Caenorhabditis elegans	YTAATTRVN	NBYAATTAR	PBM Weirauch et al.(2014) pTH6366	0.646	0.456
LHX6 M02086_2.00	Homo sapiens	NTRATTRN	NYAATYAN	PBM Weirauch et al.(2014) pTH6556	0.646	0.474
Lhx6 M00434_2.00	Mus musculus	NTRATTRN	NYAATYAN	PBM Berger et al.(2008) Lhx6_2272	0.646	0.474
Lhx8 M00534_2.00	Mus musculus	NNTRATKRN	NYMATYANN	PBM Berger et al.(2008) Lhx8_2247	0.646	0.474
Lhx6_CONSTRUCT M00539_2.00	PBM CONSTRUCTS	NNTRATTRN	NYAATYANN	PBM Berger et al.(2008) Lhx6_3432	0.646	0.474
LHX6 M03108_2.00	Homo sapiens	VYTAATTAVB	VBTAATTARB	SELEX Jolma et al.(2013) LHX6_1	0.646	0.474
LHX6 M03109_2.00	Homo sapiens	YAATYARYRCTAATTA	TAATTAGYRYTRATTR	SELEX Jolma et al.(2013) LHX6_2	0.646	0.474
LHX6 M03110_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Jolma et al.(2013) LHX6_3	0.646	0.474
Lhx8 M03288_2.00	Mus musculus	BYRATYRVNNBTRATYRN	NYRATYAVNNBYRATYRV	SELEX Jolma et al.(2013) Lhx8_1	0.646	0.474
Lhx8 M03289_2.00	Mus musculus	BYRATYRV	BYRATYRV	SELEX Jolma et al.(2013) Lhx8_2	0.646	0.474
Lhx8 M03290_2.00	Mus musculus	TRATTGCAATYA	TRATTGCAATYA	SELEX Jolma et al.(2013) Lhx8_3	0.646	0.474
LHX6 M04992_2.00	Homo sapiens	CTAATTRV	BYAATTAG	SELEX Yin et al.(2017) LHX6_FL_HT-SELEX_1	0.646	0.474
LHX6 M04993_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX6_FL_HT-SELEX_2	0.646	0.474
LHX8 M05210_2.00	Homo sapiens	STAATTAN	NTAATTAS	SELEX Yin et al.(2017) LHX8_FL_HT-SELEX_1	0.646	0.474
LHX8 M05211_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX8_FL_HT-SELEX_2	0.646	0.474
LHX6 M05870_2.00	Homo sapiens	NYTRATTR	YAATYARN	SMiLE-seq Isakova et al.(2017) LHX6	0.646	0.474
Lhx6 M09187_2.00	Mus musculus	NYTGATTRV	BYAATCARN	Misc Kulakovskiy et al.(2013) LHX6_MOUSE.H11MO.0.C	0.646	0.474
LHX8 M10713_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX8_06	0.646	0.474
LHX6 M04994_2.00	Homo sapiens	STAATTAV	BTAATTAS	SELEX Yin et al.(2017) LHX6_FL_Methyl-HT-SELEX_1	0.646	0.474
LHX6 M04995_2.00	Homo sapiens	HTAACGAG	CTCGTTAD	SELEX Yin et al.(2017) LHX6_FL_Methyl-HT-SELEX_2	0.646	0.474
LHX6 M04996_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX6_FL_Methyl-HT-SELEX_3	0.646	0.474
LHX8 M05212_2.00	Homo sapiens	STAATYAN	NTRATTAS	SELEX Yin et al.(2017) LHX8_FL_Methyl-HT-SELEX_1	0.646	0.474
LHX8 M05213_2.00	Homo sapiens	NTAACGAB	VTCGTTAN	SELEX Yin et al.(2017) LHX8_FL_Methyl-HT-SELEX_2	0.646	0.474
LHX8 M05214_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX8_FL_Methyl-HT-SELEX_3	0.646	0.474
VSX1 M00268_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) VSX1_R166Q	0.644	0.386
HESX1 M00309_2.00	Homo sapiens	HTAATTRGN	NCYAATTAD	PBM Barrera et al.(2016) HESX1_REF	0.643	0.404
P79681_ACIBE M02200_2.00	Acipenser baerii	DTAATTRB	VYAATTAH	PBM Weirauch et al.(2014) pTH6156	0.643	0.404
HESX1 M00306_2.00	Homo sapiens	WRATDRNN	NNYHATYW	PBM Barrera et al.(2016) HESX1_E149K	0.643	0.404
HESX1 M00307_2.00	Homo sapiens	TAATTRNN	NNYAATTA	PBM Barrera et al.(2016) HESX1_N125S	0.643	0.404
HESX1 M00308_2.00	Homo sapiens	NATAHATRN	NYATDTATN	PBM Barrera et al.(2016) HESX1_R160C	0.643	0.386
Vsx1 M02129_2.00	Drosophila melanogaster	VTTAATTRR	YYAATTAAB	PBM Weirauch et al.(2014) pTH5821	0.643	0.386
Vsx1 M03879_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) Vsx1_1	0.643	0.386
Vsx1 M06552_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0181.1	0.643	0.386
Vsx1 M06380_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG4136_Cell_FBgn0029775	0.643	0.386
Vsx1 M06381_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG4136_SOLEXA_FBgn0029775	0.643	0.386
OdsH M03851_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) OdsH_1	0.639	0.386
OdsH M03852_2.00	Drosophila melanogaster	TAATBNVATTA	TAATBNVATTA	SELEX Nitta et al.(2015) OdsH_2	0.639	0.386
OdsH M06528_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0198.1	0.639	0.386
OdsH M06330_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Zhu et al.(2011) Odsh_Cell_FBgn0026058	0.639	0.386
OdsH M06331_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Odsh_SOLEXA_FBgn0026058	0.639	0.386
PHOX2B M00279_2.00	Homo sapiens	NVTAATTRMNN	NNKYAATTABN	PBM Barrera et al.(2016) PHOX2B_R100L	0.638	0.386
unc-4 M03846_2.00	Drosophila melanogaster	TAATTNAATTA	TAATTNAATTA	SELEX Nitta et al.(2015) unc-4_1	0.638	0.386
unc-4 M06523_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0250.1	0.638	0.386
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.638	0.386
mixl1.S M02233_2.00	Xenopus laevis	NHTAATTAANN	NNTTAATTADN	PBM Weirauch et al.(2014) pTH6163	0.628	0.351
Q4RRY4_TETNG M02169_2.00	Tetraodon nigroviridis	NNYAATYAN	NTRATTRNN	PBM Weirauch et al.(2014) pTH6326	0.614	0.386
NOBOX M02084_2.00	Homo sapiens	NNHDATDRNN	NNYHATHDNN	PBM Weirauch et al.(2014) pTH6448	0.614	0.316
AAZ08039 M02221_2.00	Xenopus tropicalis	NHTAATTRNN	NNYAATTADN	PBM Weirauch et al.(2014) pTH5791	0.614	0.316
Nobox M00448_2.00	Mus musculus	NHDABDRNN	NNYHVTHDN	PBM Berger et al.(2008) Og2x_3719	0.612	0.298
Nobox M02688_2.00	Mus musculus	TAATTRSB	VSYAATTA	SELEX Mathelier et al.(2014) MA0125.1	0.612	0.298
Nobox M09194_2.00	Mus musculus	HTAATTRVB	VBYAATTAD	Misc Kulakovskiy et al.(2013) NOBOX_MOUSE.H11MO.0.C	0.612	0.298
Nobox M10766_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$OG2_01	0.612	0.298
SNAPOd2T00006145001 M02230_2.00	Oikopleura dioica	NNTRATKRNN	NNYMATYANN	PBM Weirauch et al.(2014) pTH5930	0.611	0.404
ro M06495_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0241.1	0.611	0.333
ro M06264_2.00	Drosophila melanogaster	NYTAATTA	TAATTARN	B1H Zhu et al.(2011) Ro_Cell_FBgn0003267	0.611	0.333
ro M06265_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Ro_SOLEXA_FBgn0003267	0.611	0.333
ENSTNIG00000017092 M02109_2.00	Tetraodon nigroviridis	YYAATCAD	HTGATTRR	PBM Weirauch et al.(2014) pTH6064	0.609	0.386
CG18599 M06539_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0177.1	0.607	0.404
CG18599 M06354_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) CG18599_Cell_FBgn0038592	0.607	0.404
CG18599 M06355_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) CG18599_SOLEXA_FBgn0038592	0.607	0.404
ceh-62 M02187_2.00	Caenorhabditis elegans	NNYAATTRNN	NNYAATTRNN	PBM Weirauch et al.(2014) pTH5492	0.604	0.368
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.603	0.456
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSP00000362573-D1	Homeodomain	210	266	KRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK

Links
Other Homeodomain family TFs
Other *Bos grunniens* TFs

4057 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL006597	Aedes aegypti	AAEL006597	I	0.000
Aan_R009530	Calypte anna	Aan_R009530	I	0.000
AARA010121	Anopheles arabiensis	AARA010121	I	0.000
AATE016309	Anopheles atroparvus	AATE016309	I	0.000
ACEP23863	Atta cephalotes	ACEP23863	I	0.000
ACHR006588	Anopheles christyi	ACHR006588	I	0.000
ACOM028774	Anopheles coluzzii	ACOM028774	I	0.000
ACUA019412	Anopheles culicifacies	ACUA019412	I	0.000
ACYPI002893	Acyrthosiphon pisum	ACYPI002893	I	0.000
ADAC003526	Anopheles darlingi	ADAC003526	I	0.000
ADIR005347	Anopheles dirus	ADIR005347	I	0.000
AEPI001627	Anopheles epiroticus	AEPI001627	I	0.000
AFAF013479	Anopheles farauti	AFAF013479	I	0.000
AFUN008966	Anopheles funestus	AFUN008966	I	0.000
AGAP003671	Anopheles gambiae	AGAP003671	I	0.000
Alligator_sinensis_CCG000534.1	Alligator sinensis	Alligator_sinensis_CCG000534.1	I	0.000
AMAM011860	Anopheles maculatus	AMAM011860	I	0.000
AMEC017317	Anopheles melas	AMEC017317	I	0.000
AMEM005009	Anopheles merus	AMEM005009	I	0.000
AQUA001538	Anopheles quadriannulatus	AQUA001538	I	0.000
ASIM_0001224701	Anisakis simplex	ASIM_0001224701	I	0.000
ASIS007650	Anopheles sinensis	ASIS007650	I	0.000
ASTEI07437	Anopheles stephensi	ASTEI07437	I	0.000
A_02450	Schistosoma haematobium	A_02450	I	0.000
A_06201	Schistosoma haematobium	A_06201	I	0.000
BGIBMGA010706	Bombyx mori	BGIBMGA010706	I	0.000
BGLB010692	Biomphalaria glabrata	BGLB010692	I	0.000
BTMF_0000772101	Brugia timori	BTMF_0000772101	I	0.000
BXY_0622200	Bursaphelenchus xylophilus	BXY_0622200	I	0.000
CapteG79432	Capitella teleta	CapteG79432	I	0.000
CGI_10023919	Crassostrea gigas	CGI_10023919	I	0.000
CLEC002956	Cimex lectularius	CLEC002956	I	0.000
CPIJ004109	Culex quinquefasciatus	CPIJ004109	I	0.000
CpipJ_CPIJ004109	Culex pipiens	CpipJ_CPIJ004109	I	0.000
csin109461	Clonorchis sinensis	csin109461	I	0.000
D915_02578	Fasciola hepatica	D915_02578	I	0.000
D917_04750	Trichinella nativa	D917_04750	I	0.000
D918_06873	Trichuris suis	D918_06873	I	0.000
ECANG7_00763	Echinococcus canadensis	ECANG7_00763	I	0.000
EmuJ_000895600	Echinococcus multilocularis	EmuJ_000895600	I	0.000
ENSACAG00000026683	Anolis carolinensis	ENSACAG00000026683	I	0.000
ENSAMEG00000002866	Ailuropoda melanoleuca	ENSAMEG00000002866	I	0.000
ENSAMEG00000009342	Ailuropoda melanoleuca	ENSAMEG00000009342	I	0.000
ENSAMXG00000002250	Astyanax mexicanus	ENSAMXG00000002250	I	0.000
ENSAMXG00000003840	Astyanax mexicanus	ENSAMXG00000003840	I	0.000
ENSAMXG00000009415	Astyanax mexicanus	ENSAMXG00000009415	I	0.000
ENSAMXG00000015414	Astyanax mexicanus	ENSAMXG00000015414	I	0.000
ENSAMXG00000024837	Astyanax mexicanus	ENSAMXG00000024837	I	0.000
ENSAPLG00000014690	Anas platyrhynchos	ENSAPLG00000014690	I	0.000
NKX3-1	Bos taurus	ENSBTAG00000001221	I	0.000
NKX3-2	Bos taurus	ENSBTAG00000010896	I	0.000
ENSBTAP00000001615-D1	Bos grunniens	ENSBTAP00000001615-D1	I	0.000
ENSCAFG00000009107	Canis familiaris	ENSCAFG00000009107	I	0.000
NKX3-2	Canis familiaris	ENSCAFG00000015412	I	0.000
NKX2-6	Canis familiaris	ENSCAFG00000024691	I	0.000
ENSCHOG00000011132	Choloepus hoffmanni	ENSCHOG00000011132	I	0.000
ENSCING00000007395	Ciona intestinalis	ENSCING00000007395	D	0.000
hlx	Ciona intestinalis	ENSCING00000019191	I	0.000
NKX3-2	Callithrix jacchus	ENSCJAG00000012159	I	0.000
NKX3-1	Callithrix jacchus	ENSCJAG00000020092	I	0.000
NKX3-2	Cavia porcellus	ENSCPOG00000005449	I	0.000
ENSCPOG00000010557	Cavia porcellus	ENSCPOG00000010557	I	0.000
ENSCSAG00000016229	Chlorocebus sabaeus	ENSCSAG00000016229	I	0.000
ENSCSAG00000016338	Chlorocebus sabaeus	ENSCSAG00000016338	I	0.000
nkx3.2	Danio rerio	ENSDARG00000037639	I	0.000
nkx3.3	Danio rerio	ENSDARG00000069327	I	0.000
nkx3-1	Danio rerio	ENSDARG00000078280	I	0.000
NKX3-2	Dasypus novemcinctus	ENSDNOG00000043074	I	0.000
NKX3-1	Dasypus novemcinctus	ENSDNOG00000044451	I	0.000
ENSECAG00000001509	Equus caballus	ENSECAG00000001509	I	0.000
NKX2-6	Equus caballus	ENSECAG00000013714	I	0.000
NKX3-1	Erinaceus europaeus	ENSEEUG00000001113	I	0.000
ENSEEUG00000012691	Erinaceus europaeus	ENSEEUG00000012691	I	0.000
NKX3-1	Echinops telfairi	ENSETEG00000018790	I	0.000
ENSFALG00000011121	Ficedula albicollis	ENSFALG00000011121	I	0.000
NKX3-2	Homo sapiens	ENSG00000109705	D	0.000
NKX3-1	Homo sapiens	ENSG00000167034	D	0.000
nkx3.3	Gasterosteus aculeatus	ENSGACG00000007573	I	0.000
nkx3-1	Gasterosteus aculeatus	ENSGACG00000010776	I	0.000
nkx3.2	Gasterosteus aculeatus	ENSGACG00000016378	I	0.000
NKX3-2	Gorilla gorilla	ENSGGOG00000008589	I	0.000
NKX3-1	Gorilla gorilla	ENSGGOG00000014369	I	0.000
ENSGMOG00000005518	Gadus morhua	ENSGMOG00000005518	I	0.000
ENSGMOG00000018725	Gadus morhua	ENSGMOG00000018725	I	0.000
ENSLACG00000003608	Latimeria chalumnae	ENSLACG00000003608	I	0.000
ENSLACG00000012763	Latimeria chalumnae	ENSLACG00000012763	I	0.000
NKX3-1	Loxodonta africana	ENSLAFG00000008941	I	0.000
NKX3-2	Loxodonta africana	ENSLAFG00000031404	I	0.000
ENSLOCG00000009031	Lepisosteus oculatus	ENSLOCG00000009031	I	0.000
ENSLOCG00000009892	Lepisosteus oculatus	ENSLOCG00000009892	I	0.000
ENSLOCG00000015015	Lepisosteus oculatus	ENSLOCG00000015015	I	0.000
ENSMICG00000000190	Microcebus murinus	ENSMICG00000000190	I	0.000
NKX3-1	Microcebus murinus	ENSMICG00000011189	I	0.000
NKX3-1	Myotis lucifugus	ENSMLUG00000006118	I	0.000
NKX3-2	Myotis lucifugus	ENSMLUG00000008362	I	0.000
NKX3-1	Macaca mulatta	ENSMMUG00000009796	I	0.000
ENSMMUG00000022026	Macaca mulatta	ENSMMUG00000022026	I	0.000
NKX3-1	Monodelphis domestica	ENSMODG00000016789	I	0.000
NKX3-2	Monodelphis domestica	ENSMODG00000024753	I	0.000
ENSMPUG00000000476	Mustela putorius furo	ENSMPUG00000000476	I	0.000
ENSMPUG00000003418	Mustela putorius furo	ENSMPUG00000003418	I	0.000
Nkx3-1	Mus musculus	ENSMUSG00000022061	D	0.000
Nkx3-2	Mus musculus	ENSMUSG00000049691	D	0.000
ENSNLEG00000015968	Nomascus leucogenys	ENSNLEG00000015968	I	0.000
ENSNLEG00000016256	Nomascus leucogenys	ENSNLEG00000016256	I	0.000
NKX3-1	Ornithorhynchus anatinus	ENSOANG00000008027	I	0.000
ENSOARG00000010071	Ovis aries	ENSOARG00000010071	I	0.000
NKX3-1	Oryctolagus cuniculus	ENSOCUG00000004294	I	0.000
NKX3-2	Oryctolagus cuniculus	ENSOCUG00000009039	I	0.000
NKX3-1	Otolemur garnettii	ENSOGAG00000001303	I	0.000
NKX3-2	Otolemur garnettii	ENSOGAG00000015615	I	0.000
ENSONIG00000000279	Oreochromis niloticus	ENSONIG00000000279	I	0.000
ENSONIG00000002379	Oreochromis niloticus	ENSONIG00000002379	I	0.000
ENSONIG00000011762	Oreochromis niloticus	ENSONIG00000011762	I	0.000
ENSONIG00000018347	Oreochromis niloticus	ENSONIG00000018347	I	0.000
NKX3-1	Ochotona princeps	ENSOPRG00000003179	I	0.000
ENSOPRG00000005452	Ochotona princeps	ENSOPRG00000005452	I	0.000
nkx3.2	Oryzias latipes	ENSORLG00000000593	I	0.000
ENSORLG00000007716	Oryzias latipes	ENSORLG00000007716	I	0.000
nkx3-1	Oryzias latipes	ENSORLG00000010925	I	0.000
ENSP00000370253	Macaca fascicularis	ENSP00000370253	I	0.000
ENSP00000371875	Macaca fascicularis	ENSP00000371875	I	0.000
ENSPANG00000004934	Papio anubis	ENSPANG00000004934	I	0.000
ENSPANG00000021310	Papio anubis	ENSPANG00000021310	I	0.000
NKX3-2	Procavia capensis	ENSPCAG00000013077	I	0.000
ENSPCAG00000016644	Procavia capensis	ENSPCAG00000016644	I	0.000
ENSPFOG00000002882	Poecilia formosa	ENSPFOG00000002882	I	0.000
ENSPFOG00000009440	Poecilia formosa	ENSPFOG00000009440	I	0.000
ENSPFOG00000009654	Poecilia formosa	ENSPFOG00000009654	I	0.000
ENSPFOG00000020885	Poecilia formosa	ENSPFOG00000020885	I	0.000
ENSPPYG00000014611	Pongo abelii	ENSPPYG00000014611	I	0.000
ENSPPYG00000018442	Pongo abelii	ENSPPYG00000018442	I	0.000
ENSPSIG00000012169	Pelodiscus sinensis	ENSPSIG00000012169	I	0.000
ENSPSIG00000017342	Pelodiscus sinensis	ENSPSIG00000017342	I	0.000
NKX3-1	Pan troglodytes	ENSPTRG00000020081	I	0.000
ENSPTRG00000031253	Pan troglodytes	ENSPTRG00000031253	I	0.000
NKX3-2	Pteropus vampyrus	ENSPVAG00000002830	I	0.000
NKX3-1	Pteropus vampyrus	ENSPVAG00000005378	I	0.000
NKX2-6	Pteropus vampyrus	ENSPVAG00000005380	I	0.000
Nkx3-1	Rattus norvegicus	ENSRNOG00000015477	I	0.000
Nkx3-2	Rattus norvegicus	ENSRNOG00000060782	I	0.000
ENSSARG00000001895	Sorex araneus	ENSSARG00000001895	I	0.000
ENSSHAG00000015475	Sarcophilus harrisii	ENSSHAG00000015475	I	0.000
ENSSSCG00000024594	Sus scrofa	ENSSSCG00000024594	I	0.000
ENSSSCG00000028216	Sus scrofa	ENSSSCG00000028216	I	0.000
ENSSTOG00000021803	Ictidomys tridecemlineatus	ENSSTOG00000021803	I	0.000
ENSTBEG00000002319	Tupaia belangeri	ENSTBEG00000002319	I	0.000
ENSTGUG00000004550	Taeniopygia guttata	ENSTGUG00000004550	I	0.000
nkx3.2	Tetraodon nigroviridis	ENSTNIG00000015732	I	0.000
NKX2-3	Takifugu rubripes	ENSTRUG00000002729	I	0.000
NKX2-3	Takifugu rubripes	ENSTRUG00000003800	I	0.000
nkx3.2	Takifugu rubripes	ENSTRUG00000014438	I	0.000
ENSTSYG00000007109	Tarsius syrichta	ENSTSYG00000007109	I	0.000
ENSTTRG00000003623	Tursiops truncatus	ENSTTRG00000003623	I	0.000
ENSTTRG00000012332	Tursiops truncatus	ENSTTRG00000012332	I	0.000
NKX3-1	Vicugna pacos	ENSVPAG00000004503	I	0.000
ENSXMAG00000005680	Xiphophorus maculatus	ENSXMAG00000005680	I	0.000
ENSXMAG00000016282	Xiphophorus maculatus	ENSXMAG00000016282	I	0.000
ENSXMAG00000020095	Xiphophorus maculatus	ENSXMAG00000020095	I	0.000
ENSXMAG00000020262	Xiphophorus maculatus	ENSXMAG00000020262	I	0.000
estExt_fgenesh2_pg.C_1430013	Branchiostoma floridae	estExt_fgenesh2_pg.C_1430013	I	0.000
bap	Drosophila melanogaster	FBgn0004862	D	0.000
bap	Drosophila simulans	FBgn0067504	I	0.000
bap	Drosophila sechellia	FBgn0067536	I	0.000
GA20672	Drosophila pseudoobscura	FBgn0080666	I	0.000
GF18600	Drosophila ananassae	FBgn0095618	I	0.000
GG24598	Drosophila erecta	FBgn0116730	I	0.000
GH22032	Drosophila grimshawi	FBgn0129493	I	0.000
GI21951	Drosophila mojavensis	FBgn0144680	I	0.000
GL27337	Drosophila persimilis	FBgn0164918	I	0.000
GJ14311	Drosophila virilis	FBgn0201526	I	0.000
GK14503	Drosophila willistoni	FBgn0216509	I	0.000
GE25732	Drosophila yakuba	FBgn0242790	I	0.000
GB47401	Apis mellifera	GB47401	I	0.000
HelroG138724	Helobdella robusta	HelroG138724	I	0.000
HelroG148616	Helobdella robusta	HelroG148616	I	0.000
HMEL006181	Heliconius melpomene	HMEL006181	I	0.000
Hsal_06436--XP_001120208.1_APIME	Harpegnathos saltator	Hsal_06436--XP_001120208.1_APIME	I	0.000
ISCW014989	Ixodes scapularis	ISCW014989	I	0.000
KGM_11246	Danaus plexippus	KGM_11246	I	0.000
L893_g18140	Steinernema glaseri	L893_g18140	I	0.000
LCUP000733	Lucilia cuprina	LCUP000733	I	0.000
LDEC009723	Leptinotarsa decemlineata	LDEC009723	I	0.000
LotgiG60615	Lottia gigantea	LotgiG60615	I	0.000
MCINX004875	Melitaea cinxia	MCINX004875	I	0.000
MCOS_0000074801	Mesocestoides corti	MCOS_0000074801	I	0.000
MDOA010758	Musca domestica	MDOA010758	I	0.000
MESCA006298	Megaselia scalaris	MESCA006298	I	0.000
Minc11316	Meloidogyne incognita	Minc11316	I	0.000
Myotis_brandtii_NKX3_10014306	Myotis brandtii	Myotis_brandtii_NKX3_10014306	I	0.000
NEMVEDRAFT_v1g208034	Nematostella vectensis	NEMVEDRAFT_v1g208034	I	0.000
nLs.2.1.2.g07743	Litomosoides sigmodontis	nLs.2.1.2.g07743	I	0.000
NV25828	Nasonia vitripennis	NV25828	I	0.000
Ocbimv22026957m.g	Octopus bimaculoides	Ocbimv22026957m.g	I	0.000
PHUM439840	Pediculus humanus	PHUM439840	I	0.000
PPAI010327	Phlebotomus papatasi	PPAI010327	I	0.000
Pvit_15821	Pogona vitticeps	Pvit_15821	I	0.000
PXEA_0003190801	Protopolystoma xenopodis	PXEA_0003190801	I	0.000
RPRC001122	Rhodnius prolixus	RPRC001122	I	0.000
Sakowv30040088m.g	Saccoglossus kowalevskii	Sakowv30040088m.g	I	0.000
SINV22315	Solenopsis invicta	SINV22315	I	0.000
SMAR005030	Strigamia maritima	SMAR005030	I	0.000
Smp_140730	Schistosoma mansoni	Smp_140730	I	0.000
SMRZ_0000016501	Schistosoma margrebowiei	SMRZ_0000016501	I	0.000
SMTD_0000549701	Schistosoma mattheei	SMTD_0000549701	I	0.000
SMU15003549	Schmidtea mediterranea	SMU15003549	I	0.000
SPU_013047	Strongylocentrotus purpuratus	SPU_013047	I	0.000
TASK_0000475201	Taenia asiatica	TASK_0000475201	I	0.000
TC012743	Tribolium castaneum	TC012743	I	0.000
TCLT_0000478201	Thelazia callipaeda	TCLT_0000478201	I	0.000
tetur04g08350	Tetranychus urticae	tetur04g08350	I	0.000
TsM_000540100	Taenia solium	TsM_000540100	I	0.000
TTAC_0000184701	Hydatigera taeniaeformis	TTAC_0000184701	I	0.000
TTRE_0000463801	Trichuris trichiura	TTRE_0000463801	I	0.000
WUBG_10043	Wuchereria bancrofti	WUBG_10043	I	0.000
nkx3-1.L	Xenopus laevis	XB-GENE-479031	I	0.000
nkx3-3	Xenopus tropicalis	XB-GENE-479908	I	0.000
nkx3-1.S	Xenopus laevis	XB-GENE-6252708	I	0.000
nkx3-3.S	Xenopus laevis	XB-GENE-865322	I	0.000
nkx3-2	Xenopus tropicalis	XB-GENE-876834	I	0.000
nkx3-2.S	Xenopus laevis	XB-GENE-876836	I	0.000
XP_002932598	Xenopus tropicalis	XP_002932598	I	0.000
YQE_10102	Dendroctonus ponderosae	YQE_10102	I	0.000

ENSP00000362573-D1 (Bos grunniens) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

4057 Related TFs

ENSP00000362573-D1 **(Bos grunniens)
Homeodomain**