Q1WMN0_COPDI (Coprinellus disseminatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Q1WMN0_COPDI T226936_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1WMN0_COPDI
M02203_2.00		 Coprinellus disseminatus
NBCAATCVN
NBGATTGVN		 PBM
Weirauch et al.(2014)
pTH5832		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1WMN9_COPDI
M02204_2.00 		Coprinellus disseminatus
NNNYAATMNN
NNKATTRNNN		 PBM
Weirauch et al.(2014)
pTH5903 		0.736 0.732
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02203_2.00 Homeodomain 2 57

DNA Binding Domains

Protein ID Domain From To Sequence
Q1WMN0_COPDI Homeodomain 150 205

Links

Other Homeodomain family TFs
Other Coprinellus disseminatus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035909 Oryza indica BGIOSGA035909 N
BGIOSGA037707 Oryza indica BGIOSGA037707 N
OGLUM09G03830 Oryza glumaepatula OGLUM09G03830 N
OLONG_026170 Oryza longistaminata OLONG_026170 N
OMERI12G12200 Oryza meridionalis OMERI12G12200 N
ONIVA03G41670 Oryza nivara ONIVA03G41670 N
ONIVA03G41700 Oryza nivara ONIVA03G41700 N
ORGLA12G0150300 Oryza glaberrima ORGLA12G0150300 N
ORGLA12G0150600 Oryza glaberrima ORGLA12G0150600 N
ORUFI12G19410 Oryza rufipogon ORUFI12G19410 N
ORUFI12G19440 Oryza rufipogon ORUFI12G19440 N