CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA12G0150300
(
Oryza glaberrima
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ORGLA12G0150300
T020514_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA12G0150300.1
B3
28
122
FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVLIFDAS
ORGLA12G0150300.1
B3
247
346
FVVVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSVKYYYLSNTTRGFNCHRWIKFIRENRLREGNVCIFELMKGARRPTMTVHVIGKA
Links
Other
B3
family TFs
Other
Oryza glaberrima
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037707
Oryza indica
BGIOSGA037707
N
1.000
ONIVA03G41670
Oryza nivara
ONIVA03G41670
N
1.000
ORUFI12G19410
Oryza rufipogon
ORUFI12G19410
N
1.000
OLONG_015006
Oryza longistaminata
OLONG_015006
N
0.984
OLONG_026170
Oryza longistaminata
OLONG_026170
N
0.713
BGIOSGA035909
Oryza indica
BGIOSGA035909
N
0.711
ONIVA03G41700
Oryza nivara
ONIVA03G41700
N
0.711
ORUFI12G19440
Oryza rufipogon
ORUFI12G19440
N
0.711
OMERI12G12190
Oryza meridionalis
OMERI12G12190
N
0.707
OMERI12G12200
Oryza meridionalis
OMERI12G12200
N
0.705
ORGLA12G0150600
Oryza glaberrima
ORGLA12G0150600
N
0.705
OGLUM09G03830
Oryza glumaepatula
OGLUM09G03830
N
0.703
OBART12G17560
Oryza barthii
OBART12G17560
N
0.700