CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART12G17560
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART12G17560
T020039_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G17560.1
B3
28
122
FFRLMTGDFAHGISIPEKVADRFSGQITKGFNLKAPSGETWCVSIEKVADELILMSGWEDFAKAHELQENDLLFFTCNGRCNGSFSFDVLIFDAS
OBART12G17560.1
B3
260
358
FVTVLQAPQIHRKGLLIVPSGFAADHLDSRSQEILLMRPNKKEKWYVKYYHASTTRGFNCQRWIKFIRENRLREGYICIFELMKGARRVTMTVHVIGKV
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA12G0150600
Oryza glaberrima
ORGLA12G0150600
N
0.995
BGIOSGA035909
Oryza indica
BGIOSGA035909
N
0.989
ONIVA03G41700
Oryza nivara
ONIVA03G41700
N
0.989
ORUFI12G19440
Oryza rufipogon
ORUFI12G19440
N
0.989
OGLUM09G03830
Oryza glumaepatula
OGLUM09G03830
N
0.984
OLONG_026170
Oryza longistaminata
OLONG_026170
N
0.978
OMERI12G12200
Oryza meridionalis
OMERI12G12200
N
0.968
BGIOSGA037707
Oryza indica
BGIOSGA037707
N
0.700
ONIVA03G41670
Oryza nivara
ONIVA03G41670
N
0.700
ORGLA12G0150300
Oryza glaberrima
ORGLA12G0150300
N
0.700
ORUFI12G19410
Oryza rufipogon
ORUFI12G19410
N
0.700