29676.m001705 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 29676.m001705 T226971_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.752 0.615
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.645 0.410
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.645 0.410
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.645 0.410
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.645 0.410
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.607 0.538
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29676.m001705 Homeodomain 305 343

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

959 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10006582 Chelonia mydas Cmyd_10006582 N 0.000
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.000
KGM_00141 Danaus plexippus KGM_00141 N 0.000
LCUP016292 Lucilia cuprina LCUP016292 N 0.000
SINV25043 Solenopsis invicta SINV25043 N 0.000
TC003728 Tribolium castaneum TC003728 N 0.000
TRV_02051 Trichophyton verrucosum TRV_02051 N 0.000
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.000