CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRV_02051
(
Trichophyton verrucosum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
TRV_02051
T333080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFE43237
Sox
131
170
VPRPPNAFILYRQHHHPVIKAAHPEYHNNDICELATKYNL
EFE43237
Sox
179
216
AVLLGKKWKAESSETKAHFKALAEEIKKKHAEENPGYQ
Links
Other
Sox
family TFs
Other
Trichophyton verrucosum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_07320
Arthroderma benhamiae
ARB_07320
N
0.738
GH16346
Drosophila grimshawi
FBgn0123817
N
0.529
ASIM_0001132301
Anisakis simplex
ASIM_0001132301
N
0.492
ASIS002444
Anopheles sinensis
ASIS002444
N
0.491
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.485
SINV25043
Solenopsis invicta
SINV25043
N
0.476
LCUP017801
Lucilia cuprina
LCUP017801
N
0.460
CLEC004367
Cimex lectularius
CLEC004367
N
0.452
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.437
sr12520
Sporisorium reilianum
sr12520
N
0.432
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.431
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.428
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.425
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.417
Myotis_brandtii_LEF1_10030597
Myotis brandtii
Myotis_brandtii_LEF1_10030597
N
0.416