fgeneshPB_pg.18__155 (Phycomyces blakesleeanus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgeneshPB_pg.18__155 T227588_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAD26261
M02055_2.00 		Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN		 PBM
Weirauch et al.(2014)
pTH6363 		0.644 0.421
NEMVEDRAFT_v1g105595
M02143_2.00 		Nematostella vectensis
NTWATWRN
NYWATWAN		 PBM
Weirauch et al.(2014)
pTH5503 		0.617 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.18__155 Homeodomain 268 324

Links

Other Homeodomain family TFs
Other Phycomyces blakesleeanus TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BOTBODRAFT_214576 Botryobasidium botryosum BOTBODRAFT_214576 I 0.635
CAD26261 Encephalitozoon cuniculi CAD26261 D 0.644
CC1G_01962 Coprinopsis cinerea CC1G_01962 I 0.646
CY34DRAFT_106181 Suillus luteus CY34DRAFT_106181 I 0.646
warA Dictyostelium discoideum DDB_G0291075 I 0.668
E5Q_01806 Mixia osmundae E5Q_01806 I 0.661
EFA86584.1 Polysphondylium pallidum EFA86584.1 I 0.668
EHEL_031090 Encephalitozoon hellem EHEL_031090 I 0.644
Eint_031070 Encephalitozoon intestinalis Eint_031070 I 0.644
EROM_031050 Encephalitozoon romaleae EROM_031050 I 0.644
estExt_fgeneshDP_pg.C_350041 Dictyostelium purpureum estExt_fgeneshDP_pg.C_350041 I 0.668
fgenesh1_pg.C_scaffold_15000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000074 I 0.638
fgeneshMC_pg.1_#_125 Mucor circinelloides fgeneshMC_pg.1_#_125 I 0.714
fgeneshMC_pg.1_#_1591 Mucor circinelloides fgeneshMC_pg.1_#_1591 I 0.826
fgeneshMC_pg.1_#_69 Mucor circinelloides fgeneshMC_pg.1_#_69 I 0.719
fgeneshMC_pg.4_#_986 Mucor circinelloides fgeneshMC_pg.4_#_986 I 0.826
fgeneshPB_pg.6__195 Phycomyces blakesleeanus fgeneshPB_pg.6__195 I 0.714
GALMADRAFT_211191 Galerina marginata GALMADRAFT_211191 I 0.648
GLOINDRAFT_21145 Rhizophagus irregularis GLOINDRAFT_21145 I 0.719
H311_05138 Anncaliia algerae H311_05138 I 0.633
J056_004115 Wallemia ichthyophaga J056_004115 I 0.622
JAAARDRAFT_47621 Jaapia argillacea JAAARDRAFT_47621 I 0.646
K443DRAFT_127593 Laccaria amethystina K443DRAFT_127593 I 0.646
KNAG_0A05600 Kazachstania naganishii KNAG_0A05600 I 0.613
LACBIDRAFT_293988 Laccaria bicolor LACBIDRAFT_293988 I 0.646
M378DRAFT_8263 Amanita muscaria M378DRAFT_8263 I 0.646
M407DRAFT_11655 Tulasnella calospora M407DRAFT_11655 I 0.614
M407DRAFT_4599 Tulasnella calospora M407DRAFT_4599 I 0.647
M408DRAFT_258951 Serendipita vermifera M408DRAFT_258951 I 0.646
M413DRAFT_413744 Hebeloma cylindrosporum M413DRAFT_413744 I 0.646
M896_030550 Ordospora colligata M896_030550 I 0.644
Moror_6758 Moniliophthora roreri Moror_6758 I 0.646
MVLG_00113 Microbotryum violaceum MVLG_00113 I 0.700
NAPIS_ORF00184 Nosema apis NAPIS_ORF00184 I 0.654
NAPIS_ORF00325 Nosema apis NAPIS_ORF00325 I 0.636
NBO_11g0012 Nosema bombycis NBO_11g0012 I 0.646
NBO_6g0031 Nosema bombycis NBO_6g0031 I 0.626
NBO_85g0005 Nosema bombycis NBO_85g0005 I 0.646
NCAS_0B05980 Naumovozyma castellii NCAS_0B05980 I 0.602
NCER_100211 Nosema ceranae NCER_100211 I 0.655
NCER_100315 Nosema ceranae NCER_100315 I 0.636
NDAI_0B03290 Naumovozyma dairenensis NDAI_0B03290 I 0.610
NEMVEDRAFT_v1g105595 Nematostella vectensis NEMVEDRAFT_v1g105595 D 0.617
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I 0.635
NERG_00880 Nematocida sp NERG_00880 I 0.635
PAXRUDRAFT_10369 Paxillus rubicundulus PAXRUDRAFT_10369 I 0.646
PGTG_00338 Puccinia graminis PGTG_00338 I 0.681
PHACADRAFT_257545 Phanerochaete carnosa PHACADRAFT_257545 I 0.638
PHLGIDRAFT_55548 Phlebiopsis gigantea PHLGIDRAFT_55548 I 0.638
PIIN_02203 Piriformospora indica PIIN_02203 I 0.646
PLEOSDRAFT_173849 Pleurotus ostreatus PLEOSDRAFT_173849 I 0.646
POSPLDRAFT_98870 Postia placenta POSPLDRAFT_98870 I 0.638
PTTG_07330 Puccinia triticina PTTG_07330 I 0.681
RHTO_02593 Rhodosporidium toruloides RHTO_02593 I 0.657
RO3G_02291 Rhizopus oryzae RO3G_02291 I 0.678
RO3G_03200 Rhizopus oryzae RO3G_03200 I 0.646
RO3G_08777 Rhizopus oryzae RO3G_08777 I 0.613
Scas_Contig613.11 Saccharomyces castellii Scas_Contig613.11 I 0.602
SERLA73DRAFT_72643 Serpula lacrymans SERLA73DRAFT_72643 I 0.646
SPPG_05107 Spizellomyces punctatus SPPG_05107 I 0.719
THOM_0497 Trachipleistophora hominis THOM_0497 I 0.660
VCUG_00708 Vavraia culicis VCUG_00708 I 0.664
WALSEDRAFT_59197 Wallemia sebi WALSEDRAFT_59197 I 0.622
YALI0_F16852g Yarrowia lipolytica YALI0_F16852g I 0.663