Aquca_091_00087 (Aquilegia coerulea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Aquca_091_00087 T228070_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.855 0.912
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.841 0.825
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.841 0.825
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.839 0.860
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.839 0.860
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.829 0.807
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.829 0.807
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.822 0.789
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.822 0.789
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.806 0.825
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.806 0.825
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.806 0.825
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.789 0.667
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.764 0.737
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.764 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_091_00087.1 Homeodomain 28 84

Links

Other Homeodomain family TFs
Other Aquilegia coerulea TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA021810 Oryza indica BGIOSGA021810 N
BGIOSGA021811 Oryza indica BGIOSGA021811 N
BGIOSGA021812 Oryza indica BGIOSGA021812 N
BGIOSGA021814 Oryza indica BGIOSGA021814 N
F775_03070 Aegilops tauschii F775_03070 I
F775_23301 Aegilops tauschii F775_23301 N
F775_23426 Aegilops tauschii F775_23426 N
GRMZM2G121111 Zea mays GRMZM2G121111 I
OB06G14500 Oryza brachyantha OB06G14500 N
OGLUM06G05040 Oryza glumaepatula OGLUM06G05040 N
ONIVA06G15060 Oryza nivara ONIVA06G15060 N
ONIVA06G15070 Oryza nivara ONIVA06G15070 N
OPUNC06G04640 Oryza punctata OPUNC06G04640 I
ORGLA06G0044500 Oryza glaberrima ORGLA06G0044500 N
ORGLA06G0044900 Oryza glaberrima ORGLA06G0044900 N
ORUFI06G04920 Oryza rufipogon ORUFI06G04920 N
Pavir.Ca01208 Panicum virgatum Pavir.Ca01208 N
Pavir.Ca01212 Panicum virgatum Pavir.Ca01212 N
Pavir.Ga00772 Panicum virgatum Pavir.Ga00772 N
Pavir.J00203 Panicum virgatum Pavir.J00203 N
Pavir.J01189 Panicum virgatum Pavir.J01189 I
Sb09g003290 Sorghum bicolor Sb09g003290 N
Sb09g003300 Sorghum bicolor Sb09g003300 N
Sb10g007420 Sorghum bicolor Sb10g007420 N
Sb10g009580 Sorghum bicolor Sb10g009580 I
Sb10g009650 Sorghum bicolor Sb10g009650 N
Si007873m.g Setaria italica Si007873m.g N
Si007889m.g Setaria italica Si007889m.g I
Si025176m.g Setaria italica Si025176m.g I
Si032172m.g Setaria italica Si032172m.g I
Si032375m.g Setaria italica Si032375m.g N
TRIUR3_31433 Triticum urartu TRIUR3_31433 N
TRIUR3_33433 Triticum urartu TRIUR3_33433 N