Gorai.004G014700 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.004G014700 T228697_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.643 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G014700.1 Homeodomain 31 87
Gorai.004G014700.2 Homeodomain 17 73
Gorai.004G014700.3 Homeodomain 17 73
Gorai.004G014700.4 Homeodomain 1 45
Gorai.004G014700.5 Homeodomain 1 45

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtbZIP70 Arabidopsis thaliana AT5G60830 N 0.000
Bo7g098020 Brassica oleracea Bo7g098020 N 0.000
Bostr.26833s0155 Boechera stricta Bostr.26833s0155 N 0.000
Bra013005 Brassica rapa Bra013005 N 0.000
Cagra.2519s0054 Capsella grandiflora Cagra.2519s0054 N 0.000
Carubv10028041m.g Capsella rubella Carubv10028041m.g N 0.000
cassava8864.m1 Manihot esculenta cassava8864.m1 I 0.000
Cla018816 Citrullus lanatus Cla018816 N 0.000
Eucgr.K02632 Eucalyptus grandis Eucgr.K02632 N 0.000
gene18282-v1.0-hybrid Fragaria vesca gene18282-v1.0-hybrid N 0.000
Gorai.008G200600 Gossypium raimondii Gorai.008G200600 N 0.000
MDP0000905135 Malus domestica MDP0000905135 N 0.000
MDP0000917315 Malus domestica MDP0000917315 N 0.000
Pm025001 Prunus mume Pm025001 N 0.000
PRUPE_ppa012281mg Prunus persica PRUPE_ppa012281mg N 0.000
TCM_014407 Theobroma cacao TCM_014407 N 0.000