Gorai.008G155100 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.008G155100 T228753_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.668 0.772
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G155100.1 Homeodomain 27 83
Gorai.008G155100.2 Homeodomain 27 83
Gorai.008G155100.3 Homeodomain 27 83
Gorai.008G155100.4 Homeodomain 27 83

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BDDG_02733 Blastomyces dermatitidis BDDG_02733 I 0.000
ACLA_022420 Aspergillus clavatus CADACLAG00003042 I 0.000
CADAFLAG00003726 Aspergillus flavus CADAFLAG00003726 I 0.000
AFUA_1G13050 Aspergillus fumigatus CADAFUAG00006933 I 0.000
ANIA_00644 Aspergillus nidulans CADANIAG00002032 I 0.000
CADAORAG00006144 Aspergillus oryzae CADAORAG00006144 I 0.000
ATEG_00500 Aspergillus terreus CADATEAG00010173 I 0.000
NFIA_012470 Neosartorya fischeri CADNFIAG00001701 I 0.000
CIMG_05925 Coccidioides immitis CIMG_05925 I 0.000
CPC735_025280 Coccidioides posadasii CPC735_025280 I 0.000
fgenesh1_pg.00083_#_465 Aspergillus carbonarius fgenesh1_pg.00083_#_465 I 0.000
H101_02410 Trichophyton interdigitale H101_02410 I 0.000
H102_04072 Trichophyton rubrum H102_04072 I 0.000
H105_04102 Trichophyton soudanense H105_04102 I 0.000
HCBG_05540 Histoplasma capsulatum HCBG_05540 D 0.000
MCYG_07072 Microsporum canis MCYG_07072 I 0.000
MCYG_07072 Arthroderma otae MCYG_07072 I 0.000
MGYG_03574 Microsporum gypseum MGYG_03574 I 0.000
PABG_06783 Paracoccidioides brasiliensis PABG_06783 I 0.000
Pc13g12350 Penicillium chrysogenum Pc13g12350 I 0.000
PCH_Pc13g12350 Penicillium rubens PCH_Pc13g12350 I 0.000
PDE_00136 Penicillium oxalicum PDE_00136 I 0.000
PDIP_26540 Penicillium digitatum PDIP_26540 I 0.000
PEX1_000130 Penicillium expansum PEX1_000130 I 0.000
PITC_056440 Penicillium italicum PITC_056440 I 0.000
PMAA_067790 Talaromyces marneffei PMAA_067790 I 0.000
PMAA_067790 Penicillium marneffei PMAA_067790 I 0.000
PVAR5_5224 Byssochlamys spectabilis PVAR5_5224 I 0.000
TEQG_08308 Trichophyton equinum TEQG_08308 I 0.000
TSTA_087860 Talaromyces stipitatus TSTA_087860 I 0.000
U727_0043367121 Penicillium solitum U727_0043367121 I 0.000