orange1.1g000279m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g000279m.g T229128_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.855 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g000279m Homeodomain 33 89
orange1.1g000281m Homeodomain 33 89
orange1.1g000285m Homeodomain 33 89
orange1.1g000448m Homeodomain 33 89

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_05146 Trichosporon asahii A1Q1_05146 N 0.000
CERSUDRAFT_110761 Ceriporiopsis subvermispora CERSUDRAFT_110761 N 0.000
estExt_fgeneshTM_pg.C_50362 Tremella mesenterica estExt_fgeneshTM_pg.C_50362 N 0.000
estExt_Genewise1Plus.C_10795 Heterobasidion annosum estExt_Genewise1Plus.C_10795 N 0.000
FOMPIDRAFT_1035071 Fomitopsis pinicola FOMPIDRAFT_1035071 N 0.000
GLOTRDRAFT_68601 Gloeophyllum trabeum GLOTRDRAFT_68601 N 0.000
HETIRDRAFT_468737 Heterobasidion irregulare HETIRDRAFT_468737 N 0.000
JAAARDRAFT_203058 Jaapia argillacea JAAARDRAFT_203058 N 0.000
K437DRAFT_132732 Tilletiaria anomala K437DRAFT_132732 N 0.000
M407DRAFT_219867 Tulasnella calospora M407DRAFT_219867 N 0.000
PaG_06601 Pseudozyma aphidis PaG_06601 N 0.000
PHACADRAFT_247554 Phanerochaete carnosa PHACADRAFT_247554 N 0.000
PHLGIDRAFT_83469 Phlebiopsis gigantea PHLGIDRAFT_83469 N 0.000
PHSY_000700 Pseudozyma hubeiensis PHSY_000700 N 0.000
SERLA73DRAFT_49851 Serpula lacrymans SERLA73DRAFT_49851 N 0.000
sr13281 Sporisorium reilianum sr13281 N 0.000
UM02061 Ustilago maydis UM02061 N 0.000