SapurV1A.0127s0040 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.0127s0040 T229427_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT6
M02037_2.00 		Arabidopsis thaliana
NNWGACNNNN
NNNNGTCWNN		 PBM
Weirauch et al.(2014)
pTH7296 		0.806 0.842
KNOX3_HORVU
M10790_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$KNOX3_01 		0.800 0.842
GRMZM2G135447
M02139_2.00 		Zea mays
DTGACRKS
SMYGTCAH		 PBM
Weirauch et al.(2014)
pTH6328 		0.789 0.807
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.751 0.772
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.696 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0127s0040.1.p Homeodomain 260 319

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP9 Arabidopsis thaliana AT5G24800 N 0.000
Bo2g159200 Brassica oleracea Bo2g159200 N 0.000
Cagra.0622s0012 Capsella grandiflora Cagra.0622s0012 N 0.000
Carubv10001471m.g Capsella rubella Carubv10001471m.g N 0.000
ATBZIP9 Arabidopsis lyrata scaffold_602583.1 N 0.000
Thhalv10004701m.g Eutrema salsugineum Thhalv10004701m.g I 0.000