CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10001471m.g
(
Capsella rubella
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Carubv10001471m.g
T071543_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10001471m
bZIP
162
224
NDLKRIRRMYSNRESARRSRRRKQEYLVDLESQVDSLKGENSTLYKQLIDATQQFRSAGTNNR
Links
Other
bZIP
family TFs
Other
Capsella rubella
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0622s0012
Capsella grandiflora
Cagra.0622s0012
N
0.918
Thhalv10004701m.g
Eutrema salsugineum
Thhalv10004701m.g
I
0.906
BZIP9
Arabidopsis thaliana
AT5G24800
N
0.852
ATBZIP9
Arabidopsis lyrata
scaffold_602583.1
N
0.852
Bo2g159200
Brassica oleracea
Bo2g159200
N
0.847
Bra020471
Brassica rapa
Bra020471
N
0.847
Bra009793
Brassica rapa
Bra009793
N
0.821
Bostr.5763s0039
Boechera stricta
Bostr.5763s0039
N
0.815
gene08757-v1.0-hybrid
Fragaria vesca
gene08757-v1.0-hybrid
I
0.794
Ciclev10008515m.g
Citrus clementina
Ciclev10008515m.g
I
0.788
orange1.1g015739m.g
Citrus sinensis
orange1.1g015739m.g
I
0.788
evm.TU.supercontig_244.3
Carica papaya
evm.TU.supercontig_244.3
N
0.786