Thhalv10016349m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10016349m.g T229575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.827 0.804
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.587
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.618 0.457
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.618 0.457
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.618 0.457
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.618 0.457
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10016349m Homeodomain 393 441
Thhalv10016350m Homeodomain 393 441
Thhalv10016351m Homeodomain 393 441

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

1013 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB003415 Anopheles albimanus AALB003415 I
AALB007457 Anopheles albimanus AALB007457 I
Aan_R004615 Calypte anna Aan_R004615 I
Aan_R006371 Calypte anna Aan_R006371 I
AARA002062 Anopheles arabiensis AARA002062 I
AARA004503 Anopheles arabiensis AARA004503 I
AATE005508 Anopheles atroparvus AATE005508 I
AATE016576 Anopheles atroparvus AATE016576 I
ACOM034376 Anopheles coluzzii ACOM034376 I
ACOM037084 Anopheles coluzzii ACOM037084 I
ADIR002611 Anopheles dirus ADIR002611 I
ADIR009852 Anopheles dirus ADIR009852 I
ADIR014786 Anopheles dirus ADIR014786 I
AEPI003799 Anopheles epiroticus AEPI003799 I
AFAF003113 Anopheles farauti AFAF003113 I
Afo_R001648 Aptenodytes forsteri Afo_R001648 I
Afo_R002824 Aptenodytes forsteri Afo_R002824 I
Afo_R010037 Aptenodytes forsteri Afo_R010037 I
AFUN006854 Anopheles funestus AFUN006854 I
AGAP012501 Anopheles gambiae AGAP012501 I
Alligator_sinensis_CCG014612.1 Alligator sinensis Alligator_sinensis_CCG014612.1 I
Alligator_sinensis_CCG017947.1 Alligator sinensis Alligator_sinensis_CCG017947.1 I
AMEC008017 Anopheles melas AMEC008017 I
AMEC009924 Anopheles melas AMEC009924 I
AMEM005429 Anopheles merus AMEM005429 I
AMEM018184 Anopheles merus AMEM018184 I
AMIN000129 Anopheles minimus AMIN000129 I
AMIN004680 Anopheles minimus AMIN004680 I
AMIN007516 Anopheles minimus AMIN007516 I
Aqu1.203581 Amphimedon queenslandica Aqu1.203581 I
Aqu1.204705 Amphimedon queenslandica Aqu1.204705 I
Aqu1.224590 Amphimedon queenslandica Aqu1.224590 I
AQUA000483 Anopheles quadriannulatus AQUA000483 I
AQUA009592 Anopheles quadriannulatus AQUA009592 I
ASIS019066 Anopheles sinensis ASIS019066 I
ASTEI04317 Anopheles stephensi ASTEI04317 I
BGIBMGA011837 Bombyx mori BGIBMGA011837 I
Brh_R005100 Buceros rhinoceros Brh_R005100 I
CapteG160905 Capitella teleta CapteG160905 I
CapteG29553 Capitella teleta CapteG29553 I
CapteG80769 Capitella teleta CapteG80769 I
Cflo_09380--XP_001120883.1_APIME Camponotus floridanus Cflo_09380--XP_001120883.1_APIME I
Cflo_11297--XP_001122113.1_APIME Camponotus floridanus Cflo_11297--XP_001122113.1_APIME I
Cflo_12808--XP_001122269.1_APIME Camponotus floridanus Cflo_12808--XP_001122269.1_APIME I
Cflo_13663--XP_396835.3_APIME Camponotus floridanus Cflo_13663--XP_396835.3_APIME I
CGI_10021920 Crassostrea gigas CGI_10021920 I
CLEC002808 Cimex lectularius CLEC002808 I
CLEC004403 Cimex lectularius CLEC004403 I
CLEC012737 Cimex lectularius CLEC012737 I
Cmyd_10002310 Chelonia mydas Cmyd_10002310 I
Cmyd_10011392 Chelonia mydas Cmyd_10011392 I
Cmyd_10017178 Chelonia mydas Cmyd_10017178 I
csin108665 Clonorchis sinensis csin108665 I
DAPPUDRAFT_28152 Daphnia pulex DAPPUDRAFT_28152 I
ECANG7_05492 Echinococcus canadensis ECANG7_05492 I
EmuJ_000394900 Echinococcus multilocularis EmuJ_000394900 I
DNMT1 Anolis carolinensis ENSACAG00000003948 I
ENSAMEG00000006432 Ailuropoda melanoleuca ENSAMEG00000006432 I
ENSAMEG00000011823 Ailuropoda melanoleuca ENSAMEG00000011823 I
ENSAMXG00000012182 Astyanax mexicanus ENSAMXG00000012182 I
DNMT1 Bos taurus ENSBTAG00000002736 I
DNMT1 Canis familiaris ENSCAFG00000017892 I
DNMT1 Choloepus hoffmanni ENSCHOG00000009490 I
DNMT1 Callithrix jacchus ENSCJAG00000005794 I
VAX2 Callithrix jacchus ENSCJAG00000031540 I
DNMT1 Cavia porcellus ENSCPOG00000019557 I
ENSCSAG00000007378 Chlorocebus sabaeus ENSCSAG00000007378 I
dnmt1 Danio rerio ENSDARG00000030756 I
DNMT1 Dasypus novemcinctus ENSDNOG00000003313 I
Dnmt1 Dipodomys ordii ENSDORG00000014116 I
DNMT1 Equus caballus ENSECAG00000026909 I
DNMT1 Echinops telfairi ENSETEG00000012574 I
ENSFALG00000007760 Ficedula albicollis ENSFALG00000007760 I
BARHL1 Felis catus ENSFCAG00000007105 I
DNMT1 Felis catus ENSFCAG00000012246 I
DNMT1 Homo sapiens ENSG00000130816 D
ENSGACG00000009430 Gasterosteus aculeatus ENSGACG00000009430 I
dnmt1 Gasterosteus aculeatus ENSGACG00000013741 I
ENSGALG00000028997 Gallus gallus ENSGALG00000028997 I
DNMT1 Gorilla gorilla ENSGGOG00000016574 I
ENSGMOG00000003491 Gadus morhua ENSGMOG00000003491 I
ENSGMOG00000007903 Gadus morhua ENSGMOG00000007903 I
DNMT1 Loxodonta africana ENSLAFG00000002818 I
TLX2 Loxodonta africana ENSLAFG00000018364 I
ENSLOCG00000007421 Lepisosteus oculatus ENSLOCG00000007421 I
ENSMEUG00000009949 Macropus eugenii ENSMEUG00000009949 I
ENSMEUG00000012650 Macropus eugenii ENSMEUG00000012650 I
DNMT1 Microcebus murinus ENSMICG00000010231 I
DNMT1 Myotis lucifugus ENSMLUG00000001347 I
DNMT1 Macaca mulatta ENSMMUG00000014604 I
DNMT1 Monodelphis domestica ENSMODG00000005463 I
ENSMODG00000017979 Monodelphis domestica ENSMODG00000017979 I
ENSMPUG00000006829 Mustela putorius furo ENSMPUG00000006829 I
Dnmt1 Mus musculus ENSMUSG00000004099 I
ENSNLEG00000012092 Nomascus leucogenys ENSNLEG00000012092 I
ENSOANG00000012255 Ornithorhynchus anatinus ENSOANG00000012255 I
ENSOARG00000015380 Ovis aries ENSOARG00000015380 I
ENSOCUG00000008415 Oryctolagus cuniculus ENSOCUG00000008415 I
DNMT1 Otolemur garnettii ENSOGAG00000001265 I
ENSONIG00000001574 Oreochromis niloticus ENSONIG00000001574 I
DNMT1 Ochotona princeps ENSOPRG00000007032 I
dnmt1 Oryzias latipes ENSORLG00000005582 I
ENSORLG00000012370 Oryzias latipes ENSORLG00000012370 I
ENSP00000352516 Macaca fascicularis ENSP00000352516 I
ENSP00000352516-D1 Bos grunniens ENSP00000352516-D1 I
ENSP00000358202 Macaca fascicularis ENSP00000358202 I
ENSP00000358202-D1 Bos grunniens ENSP00000358202-D1 I
ENSPANG00000001264 Papio anubis ENSPANG00000001264 I
ENSPCAG00000004179 Procavia capensis ENSPCAG00000004179 I
DNMT1 Procavia capensis ENSPCAG00000011023 I
ENSPFOG00000005624 Poecilia formosa ENSPFOG00000005624 I
ENSPMAG00000002148 Petromyzon marinus ENSPMAG00000002148 I
ENSPPYG00000009545 Pongo abelii ENSPPYG00000009545 I
ENSPSIG00000002916 Pelodiscus sinensis ENSPSIG00000002916 I
DNMT1 Pan troglodytes ENSPTRG00000010461 I
DNMT1 Pteropus vampyrus ENSPVAG00000003676 I
ENSPVAG00000011613 Pteropus vampyrus ENSPVAG00000011613 I
Dnmt1 Rattus norvegicus ENSRNOG00000039859 I
ENSSHAG00000004362 Sarcophilus harrisii ENSSHAG00000004362 I
ENSSHAG00000008894 Sarcophilus harrisii ENSSHAG00000008894 I
DNMT1 Sus scrofa ENSSSCG00000013659 I
ENSSTOG00000010841 Ictidomys tridecemlineatus ENSSTOG00000010841 I
ENSTGUG00000013708 Taeniopygia guttata ENSTGUG00000013708 I
ENSTNIG00000005484 Tetraodon nigroviridis ENSTNIG00000005484 I
hmx3a Tetraodon nigroviridis ENSTNIG00000013351 I
dnmt1 Tetraodon nigroviridis ENSTNIG00000018567 I
dnmt1 Takifugu rubripes ENSTRUG00000008132 I
DNMT1 Tursiops truncatus ENSTTRG00000003178 I
BARHL1 Tursiops truncatus ENSTTRG00000014090 I
DNMT1 Vicugna pacos ENSVPAG00000006117 I
ENSXMAG00000018063 Xiphophorus maculatus ENSXMAG00000018063 I
estExt_fgenesh2_pg.C_2100001 Branchiostoma floridae estExt_fgenesh2_pg.C_2100001 I
estExt_gwp.C_2590007 Branchiostoma floridae estExt_gwp.C_2590007 I
OdsH Drosophila sechellia FBgn0026109 I
GK13741 Drosophila willistoni FBgn0215749 I
GB47348 Apis mellifera GB47348 I
GB48403 Apis mellifera GB48403 I
Gfo_R002685 Geospiza fortis Gfo_R002685 I
Gfo_R014727 Geospiza fortis Gfo_R014727 I
HCOI02067700 Haemonchus contortus HCOI02067700 I
HDID_0000029301 Hymenolepis diminuta HDID_0000029301 I
HelroG116156 Helobdella robusta HelroG116156 I
HMEL004582 Heliconius melpomene HMEL004582 I
HmN_000638300 Hymenolepis microstoma HmN_000638300 I
HNAJ_0001006601 Hymenolepis nana HNAJ_0001006601 I
HPLM_0000567701 Haemonchus placei HPLM_0000567701 I
Hsal_01309--XP_001120883.1_APIME Harpegnathos saltator Hsal_01309--XP_001120883.1_APIME I
Hsal_12039--XP_396835.3_APIME Harpegnathos saltator Hsal_12039--XP_396835.3_APIME I
KGM_17721 Danaus plexippus KGM_17721 I
KLTH0F09636g Lachancea thermotolerans KLTH0F09636g I
KLTH0F09636g Kluyveromyces thermotolerans KLTH0F09636g I
Kwal_3494 Kluyveromyces waltii Kwal_3494 I
L889_g5750 Steinernema feltiae L889_g5750 I
L893_g26530 Steinernema glaseri L893_g26530 I
L898_g35957 Steinernema monticolum L898_g35957 I
LALA0_S03e04016g Lachancea lanzarotensis LALA0_S03e04016g I
LCUP015082 Lucilia cuprina LCUP015082 I
LDEC016261 Leptinotarsa decemlineata LDEC016261 I
LLOJ002195 Lutzomyia longipalpis LLOJ002195 I
LLOJ005414 Lutzomyia longipalpis LLOJ005414 I
LotgiG171288 Lottia gigantea LotgiG171288 I
LotgiG89067 Lottia gigantea LotgiG89067 I
MCINX016053 Melitaea cinxia MCINX016053 I
MCOS_0000216701 Mesocestoides corti MCOS_0000216701 I
MDOA003511 Musca domestica MDOA003511 I
MDOA008856 Musca domestica MDOA008856 I
ML04966a Mnemiopsis leidyi ML04966a I
Myotis_brandtii_DNMT1_10007965 Myotis brandtii Myotis_brandtii_DNMT1_10007965 I
Myotis_brandtii_EMX2_10024925 Myotis brandtii Myotis_brandtii_EMX2_10024925 I
NEMVEDRAFT_v1g125496 Nematostella vectensis NEMVEDRAFT_v1g125496 I
nOo.2.0.1.g09747 Onchocerca ochengi nOo.2.0.1.g09747 I
NV11649 Nasonia vitripennis NV11649 I
O9G_003621 Rozella allomycis O9G_003621 I
Ocbimv22034501m.g Octopus bimaculoides Ocbimv22034501m.g I
Ogr12994 Ophisaurus gracilis Ogr12994 I
Ogr16573 Ophisaurus gracilis Ogr16573 I
PHUM050850 Pediculus humanus PHUM050850 I
PPAI003800 Phlebotomus papatasi PPAI003800 I
PPAI008153 Phlebotomus papatasi PPAI008153 I
Pvit_03471 Pogona vitticeps Pvit_03471 I
Pvit_11669 Pogona vitticeps Pvit_11669 I
Sakowv30004224m.g Saccoglossus kowalevskii Sakowv30004224m.g I
Sakowv30005306m.g Saccoglossus kowalevskii Sakowv30005306m.g I
Sakowv30007560m.g Saccoglossus kowalevskii Sakowv30007560m.g I
Sakowv30018456m.g Saccoglossus kowalevskii Sakowv30018456m.g I
scaffold258-EXSNAP2012.18 Pristionchus exspectatus scaffold258-EXSNAP2012.18 I
SMAR007945 Strigamia maritima SMAR007945 I
SNAPOd2T00013469001 Oikopleura dioica SNAPOd2T00013469001 I
SPER_0002969301 Spirometra erinaceieuropaei SPER_0002969301 I
T265_00509 Opisthorchis viverrini T265_00509 I
TASK_0000909001 Taenia asiatica TASK_0000909001 I
tetur20g03427 Tetranychus urticae tetur20g03427 I
TsM_001101500 Taenia solium TsM_001101500 I
TTAC_0000304201 Hydatigera taeniaeformis TTAC_0000304201 I
WBGene00238595 Onchocerca volvulus WBGene00238595 I
dnmt1.S Xenopus laevis XB-GENE-17332488 I
emx2 Xenopus tropicalis XB-GENE-481028 I
emx2.L Xenopus laevis XB-GENE-865434 I
emx1 Xenopus tropicalis XB-GENE-876649 I
dnmt1 Xenopus tropicalis XB-GENE-965562 I
dnmt1.L Xenopus laevis XB-GENE-965566 I