BGLB007215 (Biomphalaria glabrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 BGLB007215 T232427_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.718 0.422
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.718 0.422
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.718 0.422
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.718 0.422
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.718 0.422
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.718 0.422
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.718 0.422
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.718 0.422
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.718 0.422
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.695 0.467
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.695 0.467
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.695 0.467
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB007215-PA Homeodomain 36 80

Links

Other Homeodomain family TFs
Other Biomphalaria glabrata TFs

1231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m013679 Ricinus communis 30170.m013679 I 0.000
cassava22418.valid.m1 Manihot esculenta cassava22418.valid.m1 I 0.000
cassava8864.m1 Manihot esculenta cassava8864.m1 I 0.000
gene02614-v1.0-hybrid Fragaria vesca gene02614-v1.0-hybrid I 0.000
MDP0000140166 Malus domestica MDP0000140166 I 0.000
MDP0000200822 Malus domestica MDP0000200822 I 0.000
PK27149.1 Cannabis sativa PK27149.1 D 0.000
POPTR_0002s11660 Populus trichocarpa POPTR_0002s11660 I 0.000
POPTR_0014s01390 Populus trichocarpa POPTR_0014s01390 I 0.000
SapurV1A.0004s0180 Salix purpurea SapurV1A.0004s0180 I 0.000