CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene02614-v1.0-hybrid
(
Fragaria vesca
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
gene02614-v1.0-hybrid
T071812_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27149.1
M01164_2.00
Cannabis sativa
TBACGTGK
MCACGTVA
PBM
Lambert et al.(2019)
pTH11283
0.877
0.742
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna02614.1-v1.0-hybrid
bZIP
66
127
DERKRRRMTSNRESARRSRGRKKRHLEDLTEEANRLKMENRELKNRLGFVAEKCHVTWRENE
Links
Other
bZIP
family TFs
Other
Fragaria vesca
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000140166
Malus domestica
MDP0000140166
I
0.928
MDP0000200822
Malus domestica
MDP0000200822
I
0.928
PK27149.1
Cannabis sativa
PK27149.1
D
0.877
POPTR_0014s01390
Populus trichocarpa
POPTR_0014s01390
I
0.871
POPTR_0002s11660
Populus trichocarpa
POPTR_0002s11660
I
0.870
30170.m013679
Ricinus communis
30170.m013679
I
0.864
cassava8864.m1
Manihot esculenta
cassava8864.m1
I
0.851
SapurV1A.0004s0180
Salix purpurea
SapurV1A.0004s0180
I
0.825
SapurV1A.3851s0010
Salix purpurea
SapurV1A.3851s0010
I
0.825
Lus10018662.g
Linum usitatissimum
Lus10018662.g
I
0.812
Ciclev10002805m.g
Citrus clementina
Ciclev10002805m.g
I
0.804
orange1.1g039918m.g
Citrus sinensis
orange1.1g039918m.g
I
0.804
cassava22418.valid.m1
Manihot esculenta
cassava22418.valid.m1
I
0.802
Lus10007726.g
Linum usitatissimum
Lus10007726.g
N
0.802
Cucsa.395470
Cucumis sativus
Cucsa.395470
I
0.800
Cla022990
Citrullus lanatus
Cla022990
I
0.796
Pm005431
Prunus mume
Pm005431
N
0.791
MTR_1g017570
Medicago truncatula
MTR_1g017570
N
0.782