CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDID_0000403701
(
Hymenolepis diminuta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
HDID_0000403701
T234249_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HDID_0000403701-mRNA-1
Homeodomain
170
216
KRPRNALTSDQLDILRSIFFTSSPLSEETITTFCEKVGLKDKSQQVQ
HDID_0000403701-mRNA-1
Homeodomain
259
315
KRFRTPISSAQQALLLQFFQADQNPSRRQMDIISSNVNLPKRVVQVWFQNARSRERR
HDID_0000403701-mRNA-1
Homeodomain
463
519
RRNRTSISSTQARFMQWFFQHHKTPTICECENIGHAIGLTRRVVQVWFQNQRAKEKK
Links
Other
Homeodomain
family TFs
Other
Hymenolepis diminuta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL30
Arabidopsis thaliana
AT3G46600
N
0.000
SCL11
Arabidopsis thaliana
AT5G59450
N
0.000
Bo1g070830
Brassica oleracea
Bo1g070830
N
0.000
Bo9g139410
Brassica oleracea
Bo9g139410
N
0.000
Bostr.18473s0299
Boechera stricta
Bostr.18473s0299
N
0.000
Bostr.26833s0299
Boechera stricta
Bostr.26833s0299
N
0.000
Bra033813
Brassica rapa
Bra033813
N
0.000
Cagra.0448s0009
Capsella grandiflora
Cagra.0448s0009
N
0.000
Cagra.1317s0069
Capsella grandiflora
Cagra.1317s0069
N
0.000
Carubv10016909m.g
Capsella rubella
Carubv10016909m.g
N
0.000
Carubv10028208m.g
Capsella rubella
Carubv10028208m.g
N
0.000
fgenesh2_kg.8__1893__AT5G59450.1
Arabidopsis lyrata
fgenesh2_kg.8__1893__AT5G59450.1
N
0.000
scaffold_501562.1
Arabidopsis lyrata
scaffold_501562.1
N
0.000
Thhalv10002455m.g
Eutrema salsugineum
Thhalv10002455m.g
N
0.000
Thhalv10013016m.g
Eutrema salsugineum
Thhalv10013016m.g
N
0.000