CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g139410
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo9g139410
T199965_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g139410.1
GRAS
214
588
LRSLLTQCAQAVASFDHRRATEKLKEIRSNSSNSGDGIQRLAFYFAEALEARITGIISPPLCTAFPSSTTSMVDILKAYKLFVHVCPIYVADYFAANKSIYELALNSTKLHIIDFGVLYGFQWPCLLLALSKRPGGPPKLRVTGIELPQSGFRPSDRVEETGRRLKRFCDMFNVPFEFNFIAKKWESITLDEITIIPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGTYNSPFFMTRFKEALFHFSSLFDMFDTTIQAEDEYKNRALLERELLVRDAMSVISSEGAERFARPETYKQWRVRLLRAGFRPAMISREILKGAKEIVRKRYHKDFLIDGDGNWMLQGWKGRVIYAFSCWR
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10013016m.g
Eutrema salsugineum
Thhalv10013016m.g
N
0.927
Cagra.1317s0069
Capsella grandiflora
Cagra.1317s0069
N
0.897
Carubv10028208m.g
Capsella rubella
Carubv10028208m.g
N
0.897
Bostr.26833s0299
Boechera stricta
Bostr.26833s0299
N
0.895
fgenesh2_kg.8__1893__AT5G59450.1
Arabidopsis lyrata
fgenesh2_kg.8__1893__AT5G59450.1
N
0.886
SCL11
Arabidopsis thaliana
AT5G59450
N
0.884
Bra002564
Brassica rapa
Bra002564
N
0.797
Thhalv10002455m.g
Eutrema salsugineum
Thhalv10002455m.g
N
0.738
SCL30
Arabidopsis thaliana
AT3G46600
N
0.729
scaffold_501562.1
Arabidopsis lyrata
scaffold_501562.1
N
0.726
Bostr.18473s0299
Boechera stricta
Bostr.18473s0299
N
0.719
Bra033813
Brassica rapa
Bra033813
N
0.714
Bo1g070830
Brassica oleracea
Bo1g070830
N
0.707