HmN_000187700 (Hymenolepis microstoma)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HmN_000187700 T234290_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hoxa7
M00476_2.00
Mus musculus
NNWAYNDNN

NNHNRTWNN
PBM
Berger et al.(2008)
Hoxa7_2668
0.840 0.930
Hoxa7
M00477_2.00
Mus musculus
NYHHYNNNN

NNNNRDDRN
PBM
Berger et al.(2008)
Hoxa7_3750
0.840 0.930
HOXA7
M05069_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX
0.840 0.930
Antp
M06549_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0166.1
0.840 0.930
Antp
M06374_2.00
Drosophila melanogaster
YTTAATKA

TMATTAAR
B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095
0.840 0.930
Antp
M06375_2.00
Drosophila melanogaster
WTAATW

AATTAW
B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095
0.840 0.930
Antp
M06376_2.00
Drosophila melanogaster
NHTAATKR

YMATTADN
B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095
0.840 0.930
Antp
M09682_2.00
Drosophila melanogaster
TYTTWATKA

TMATWAARA
Misc
Kulakovskiy et al.(2009)
Antp
0.840 0.930
Antp
M10789_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ANTP_Q6_01
0.840 0.930
HOXA7
M10679_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA7_01
0.840 0.930
HOXA7
M05070_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1
0.840 0.930
HOXA7
M05071_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2
0.840 0.930
HOXB7
M00334_2.00
Homo sapiens
NBRDNNN

NNNHYVN
PBM
Barrera et al.(2016)
HOXB7_REF
0.835 0.912
Hoxb7
M00481_2.00
Mus musculus
NNWAYNDN

NHNRTWNN
PBM
Berger et al.(2008)
Hoxb7_3953
0.835 0.912
HOXB7
M05404_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX
0.835 0.912
HOXB7
M05407_2.00
Homo sapiens
BBTAATTRCN

NGYAATTAVV
SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX
0.835 0.912
HOXB7
M09166_2.00
Homo sapiens
MATHAATCAW

WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C
0.835 0.912
Hoxb7
M09206_2.00
Mus musculus
MATHAATCAW

WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C
0.835 0.912
HOXB7
M05405_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1
0.835 0.912
HOXB7
M05406_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2
0.835 0.912
HOXB7
M05408_2.00
Homo sapiens
NNTAATKRCN

NGYMATTANN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1
0.835 0.912
HOXB7
M05409_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2
0.835 0.912
HOXB7
M00333_2.00
Homo sapiens
NHATWTATTN

NAATAWATDN
PBM
Barrera et al.(2016)
HOXB7_R189C
0.835 0.895
ftz
M03795_2.00
Drosophila melanogaster
WTAATTRC

GYAATTAW
SELEX
Nitta et al.(2015)
ftz_1
0.834 0.877
ftz
M06488_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0225.1
0.834 0.877
ftz
M06247_2.00
Drosophila melanogaster
VTTAATKA

TMATTAAB
B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077
0.834 0.877
ftz
M06248_2.00
Drosophila melanogaster
TAATKRNH

DNYMATTA
B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077
0.834 0.877
ftz
M06249_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077
0.834 0.877
ftz
M09679_2.00
Drosophila melanogaster
YTAATKRNN

NNYMATTAR
Misc
Kulakovskiy et al.(2009)
ftz
0.834 0.877
ftz
M10787_2.00
Drosophila melanogaster
CTTAATTRBHBB

VVDVYAATTAAG
Transfac
Matys et al.(2006)
I$FTZ_01
0.834 0.877
CBG00029
M01240_2.00
Caenorhabditis briggsae
ATTAATTA

TAATTAAT
PBM
Lambert et al.(2019)
pTH11471
0.831 0.789
Hoxa6
M00494_2.00
Mus musculus
NWWATKRNN

NNYMATWWN
PBM
Berger et al.(2008)
Hoxa6_1040
0.808 0.895
HOXA6
M04974_2.00
Homo sapiens
NNTAATKRVN

NBYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
0.808 0.895
HOXA6
M04975_2.00
Homo sapiens
NNTAATKRBN

NVYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
0.808 0.895
HOXA6
M04976_2.00
Homo sapiens
NTAAYGRY

RYCRTTAN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
0.808 0.895
Hoxb6
M00381_2.00
Mus musculus
NNDHNNN

NNNDHNN
PBM
Berger et al.(2008)
Hoxb6_3428
0.804 0.895
HOXB6
M04999_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
0.804 0.895
HOXB6
M05000_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
0.804 0.895
HOXB6
M05001_2.00
Homo sapiens
NTWATKRB

VYMATWAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
0.804 0.895
Hoxb8
M00517_2.00
Mus musculus
NWWAYNDNN

NNHNRTWWN
PBM
Berger et al.(2008)
Hoxb8_3780
0.801 0.807
HOXB8
M05048_2.00
Homo sapiens
NTAATKRM

KYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
0.801 0.807
HOXB8
M09141_2.00
Homo sapiens
BMATHAATCAA

TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
0.801 0.807
Hoxb8
M09214_2.00
Mus musculus
BMATHAATCAA

TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
0.801 0.807
HOXB8
M05049_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
0.801 0.807
HOXB8
M05050_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
0.801 0.807
Hoxd8
M00436_2.00
Mus musculus
NNWWYNNN

NNNRWWNN
PBM
Berger et al.(2008)
Hoxd8_2644
0.801 0.789
HOXD8
M03221_2.00
Homo sapiens
VHWAATKWDN

NHWMATTWDB
SELEX
Jolma et al.(2013)
HOXD8_1
0.801 0.789
HOXD8
M05310_2.00
Homo sapiens
BTAATKRY

RYMATTAV
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
0.801 0.789
HOXD8
M05311_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
0.801 0.789
HOXD8
M05312_2.00
Homo sapiens
NTWAYGRY

RYCRTWAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
0.801 0.789
Hoxc6
M00392_2.00
Mus musculus
TTAATTAB

VTAATTAA
PBM
Berger et al.(2008)
Hoxc6_3954
0.795 0.860
abd-A
M03770_2.00
Drosophila melanogaster
NNTAATKRCN

NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_1
0.792 0.877
abd-A
M03771_2.00
Drosophila melanogaster
NNTAATKRCN

NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_2
0.792 0.877
abd-A
M06475_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0206.1
0.792 0.877
abd-A
M06210_2.00
Drosophila melanogaster
WTWATKDM

KHMATWAW
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
0.792 0.877
abd-A
M09671_2.00
Drosophila melanogaster
HTAATKRH

DYMATTAD
Misc
Kulakovskiy et al.(2009)
abd-A
0.792 0.877
abd-A
M10778_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDA_Q6
0.792 0.877
Ubx
M00558_2.00
Drosophila melanogaster
NWWAYDDNN

NNHHRTWWN
PBM
Busser et al.(2012a)
Ubx
0.783 0.860
Ubx
M03804_2.00
Drosophila melanogaster
NTAATKRH

DYMATTAN
SELEX
Nitta et al.(2015)
Ubx_1
0.783 0.860
Ubx
M06499_2.00
Drosophila melanogaster
NTTAATKR

YMATTAAN
B1H
Mathelier et al.(2014)
MA0094.2
0.783 0.860
Ubx
M06273_2.00
Drosophila melanogaster
NTTAATKR

YMATTAAN
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
0.783 0.860
Ubx
M06274_2.00
Drosophila melanogaster
TAATKD

HMATTA
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
0.783 0.860
Ubx
M06275_2.00
Drosophila melanogaster
NTTWATKR

YMATWAAN
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
0.783 0.860
Ubx
M09680_2.00
Drosophila melanogaster
TTAATKR

YMATTAA
Misc
Kulakovskiy et al.(2009)
Ubx
0.783 0.860
Ubx
M10788_2.00
Drosophila melanogaster
NNVNNNNTAATKRNBHNND

HNNDVNYMATTANNNNBNN
Transfac
Matys et al.(2006)
I$UBX_01
0.783 0.860
HOXB7
M00331_2.00
Homo sapiens
NNNNNNY

RNNNNNN
PBM
Barrera et al.(2016)
HOXB7_K191R
0.779 0.895
Hoxc8
M00391_2.00
Mus musculus
NNDNYNNNN

NNNNRNHNN
PBM
Berger et al.(2008)
Hoxc8_3429
0.769 0.789
HOXC8
M04912_2.00
Homo sapiens
NYAATTRN

NYAATTRN
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
0.769 0.789
HOXC8
M10636_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXC8_Q3
0.769 0.789
HOXC8
M04913_2.00
Homo sapiens
NYMATKRN

NYMATKRN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
0.769 0.789
HOXC8
M04914_2.00
Homo sapiens
NTWAYGRY

RYCRTWAN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
0.769 0.789
HOXB7
M00332_2.00
Homo sapiens
NDWATATAYN

NRTATATWHN
PBM
Barrera et al.(2016)
HOXB7_M190L
0.759 0.895
egl-5
M09581_2.00
Caenorhabditis elegans
DWTTWATGGS

SCCATWAAWH
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
0.742 0.561
CBG00023
M02062_2.00
Caenorhabditis briggsae
NWWATKDNNN

NNNHMATWWN
PBM
Weirauch et al.(2014)
pTH5778
0.742 0.544
Q8I9J5_9BILA
M02214_2.00
Spadella cephaloptera
NVTAWTWABN

NVTWAWTABN
PBM
Weirauch et al.(2014)
pTH6164
0.721 0.667
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.688 0.895
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.688 0.895
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA

TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.688 0.895
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.688 0.895
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.688 0.877
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN

NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.688 0.877
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN

NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.688 0.877
HOXA5
M04968_2.00
Homo sapiens
STAATKRS

SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.688 0.877
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB

VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.688 0.877
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.688 0.877
HOXB5
M05054_2.00
Homo sapiens
STMATKAB

VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.688 0.877
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR

YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.688 0.877
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK

MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.688 0.877
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.688 0.877
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.688 0.877
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.688 0.877
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.688 0.877
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.688 0.877
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.688 0.877
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB

VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.688 0.877
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.688 0.877
Hoxc5
M00422_2.00
Mus musculus
NWRATND

HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.688 0.860
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN

NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.681 0.526
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.651 0.789
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB

VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.651 0.842
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN

NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.651 0.842
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.651 0.842
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.651 0.842
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.651 0.842
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB

VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.651 0.825
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.651 0.754
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.651 0.754
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.651 0.754
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.651 0.754
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.651 0.754
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.651 0.754
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.651 0.754
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.651 0.754
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.651 0.754
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.651 0.754
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.651 0.754
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.651 0.754
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.651 0.754
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.651 0.754
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.651 0.754
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.651 0.754
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.651 0.754
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.651 0.754
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.651 0.754
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.643 0.842
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.643 0.842
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.643 0.842
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.643 0.842
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.643 0.842
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.643 0.842
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.643 0.825
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.643 0.825
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.643 0.825
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.643 0.825
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.639 0.825
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.639 0.825
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.639 0.825
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.639 0.825
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.639 0.825
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.639 0.825
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.639 0.825
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.639 0.825
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.639 0.807
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY

RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.639 0.807
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.639 0.807
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.639 0.807
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN

NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.639 0.807
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.639 0.807
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB

VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.639 0.807
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG

CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.635 0.789
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK

MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.635 0.789
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC

GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.623 0.737
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.621 0.667
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.621 0.667
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.621 0.667
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.621 0.667
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.621 0.667
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.621 0.667
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.621 0.667
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.619 0.667
zen
M06500_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.619 0.667
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA

TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.619 0.667
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG

CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.619 0.667
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.619 0.667
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN

NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.619 0.825
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.617 0.719
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN

NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.617 0.719
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.617 0.719
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.617 0.719
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS

STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.617 0.719
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB

VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.617 0.719
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY

RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.617 0.719
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC

GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.617 0.719
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.617 0.702
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.617 0.702
CG34031
M02126_2.00
Drosophila melanogaster
NNNDNNRN

NYNNHNNN
PBM
Weirauch et al.(2014)
pTH6447
0.616 0.544
CG34031
M06548_2.00
Drosophila melanogaster
TTAATWG

CWATTAA
B1H
Mathelier et al.(2014)
MA0444.1
0.616 0.544
CG34031
M06372_2.00
Drosophila melanogaster
BTTAATWG

CWATTAAV
B1H
Zhu et al.(2011)
CG34031_Cell_FBgn0054031
0.616 0.544
CG34031
M06373_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
CG34031_SOLEXA_FBgn0054031
0.616 0.544
ceh-19
M02180_2.00
Caenorhabditis elegans
NTWAWDRNN

NNYHWTWAN
PBM
Weirauch et al.(2014)
pTH5661
0.602 0.526
Q9GP48_9TURB
M02217_2.00
Discocelis tigrina
DTAATTAB

VTAATTAH
PBM
Weirauch et al.(2014)
pTH6515
0.599 0.596
Hoxc9
M00470_2.00
Mus musculus
NGTAATWAAN

NTTWATTACN
PBM
Berger et al.(2008)
Hoxc9_2367
0.599 0.719
Hoxd9
M03282_2.00
Mus musculus
TTTWATKKB

VMMATWAAA
SELEX
Jolma et al.(2013)
Hoxd9_1
0.599 0.719
Hoxd9
M03283_2.00
Mus musculus
DWTTWATKRY

RYMATWAAWH
SELEX
Jolma et al.(2013)
Hoxd9_2
0.599 0.719
Hoxd9
M03284_2.00
Mus musculus
DTTWAYGRB

VYCRTWAAH
SELEX
Jolma et al.(2013)
Hoxd9_3
0.599 0.719
HOXC9
M05331_2.00
Homo sapiens
GTCGTAAAAN

NTTTTACGAC
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
0.599 0.719
HOXC9
M05332_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
0.599 0.719
HOXD9
M05104_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
0.599 0.719
HOXD9
M05105_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
0.599 0.719
HOXD9
M05108_2.00
Homo sapiens
RTCGTAAAWN

NWTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
0.599 0.719
HOXD9
M05109_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
0.599 0.719
Hoxc9
M08137_2.00
Mus musculus
NWGATTTATDGSH

DSCHATAAATCWN
ChIP-seq
Mathelier et al.(2014)
MA0485.1
0.599 0.719
HOXC9
M09161_2.00
Homo sapiens
HTTWATKGCH

DGCMATWAAD
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
0.599 0.719
Hoxc9
M09574_2.00
Mus musculus
TGATTTATDGCH

DGCHATAAATCA
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
0.599 0.719
HOXD9
M10686_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD9_Q2
0.599 0.719
HOXC9
M05333_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
0.599 0.719
HOXC9
M05334_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
0.599 0.719
HOXD9
M05106_2.00
Homo sapiens
NNTTWATKRC

GYMATWAANN
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
0.599 0.719
HOXD9
M05107_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
0.599 0.719
HOXD9
M05110_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
0.599 0.719
HOXD9
M05111_2.00
Homo sapiens
NDTTWATKRC

GYMATWAAHN
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
0.599 0.719
Hoxb9
M00410_2.00
Mus musculus
NTTWAYDDNN

NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb9_3413
0.599 0.702
Hoxa9
M00475_2.00
Mus musculus
NNDDBNNN

NNNVHHNN
PBM
Berger et al.(2008)
Hoxa9_2622
0.599 0.702
HOXA9
M03085_2.00
Homo sapiens
NNDTTWAYGAYN

NRTCRTWAAHNN
SELEX
Jolma et al.(2013)
HOXA10_1
0.599 0.702
HOXA9
M03086_2.00
Homo sapiens
NDTTWATKRYN

NRYMATWAAHN
SELEX
Jolma et al.(2013)
HOXA10_2
0.599 0.702
HOXA9
M04932_2.00
Homo sapiens
NNDWWABKRC

GYMVTWWHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
0.599 0.702
HOXA9
M04933_2.00
Homo sapiens
NNDTWAYGRB

VYCRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
0.599 0.702
HOXB9
M05289_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
0.599 0.702
HOXB9
M05290_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
0.599 0.702
Hoxa9
M08138_2.00
Mus musculus
TGATTKATKRB

VYMATMAATCA
ChIP-seq
Mathelier et al.(2014)
MA0594.1
0.599 0.702
HOXA9
M09130_2.00
Homo sapiens
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
0.599 0.702
HOXA9
M09131_2.00
Homo sapiens
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
0.599 0.702
Hoxa9
M09203_2.00
Mus musculus
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
0.599 0.702
Hoxa9
M09575_2.00
Mus musculus
WGATTKATDRBY

RVYHATMAATCW
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
0.599 0.702
HOXA9
M10642_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q6
0.599 0.702
HOXA9
M10643_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_04
0.599 0.702
HOXA9
M10644_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
0.599 0.702
HOXA9
M10645_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5
0.599 0.702
HOXB9
M05291_2.00
Homo sapiens
GTCGTAAAHB

VDTTTACGAC
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
0.599 0.702
HOXA9
M04934_2.00
Homo sapiens
NNDTWAYKRC

GYMRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
0.599 0.702
HOXA9
M04935_2.00
Homo sapiens
NNDTWACGAY

RTCGTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
0.599 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000187700 Homeodomain 445 501

Links

Other Homeodomain family TFs
Other Hymenolepis microstoma TFs

2084 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29623.m000322 Ricinus communis 29623.m000322 I
29812.m000200 Ricinus communis 29812.m000200 I
30000.m000371 Ricinus communis 30000.m000371 I
30068.m002527 Ricinus communis 30068.m002527 I
30122.m000341 Ricinus communis 30122.m000341 I
30170.m014365 Ricinus communis 30170.m014365 I
Al_scaffold_0003_3669 Arabidopsis lyrata Al_scaffold_0003_3669 I
Al_scaffold_0005_2880 Arabidopsis lyrata Al_scaffold_0005_2880 I
AMTR_s00001p00009420 Amborella trichopoda AMTR_s00001p00009420 I
AMTR_s00058p00147810 Amborella trichopoda AMTR_s00058p00147810 I
AMTR_s00066p00148680 Amborella trichopoda AMTR_s00066p00148680 I
AMTR_s00080p00150020 Amborella trichopoda AMTR_s00080p00150020 I
Aquca_010_00024 Aquilegia coerulea Aquca_010_00024 I
Aquca_015_00363 Aquilegia coerulea Aquca_015_00363 I
Aquca_026_00180 Aquilegia coerulea Aquca_026_00180 I
NLP4 Arabidopsis thaliana AT1G20640 D
NLP6 Arabidopsis thaliana AT1G64530 I
NLP5 Arabidopsis thaliana AT1G76350 I
NLP1 Arabidopsis thaliana AT2G17150 I
AT2G43500 Arabidopsis thaliana AT2G43500 I
NLP9 Arabidopsis thaliana AT3G59580 I
NLP7 Arabidopsis thaliana AT4G24020 D
NLP2 Arabidopsis thaliana AT4G35270 I
NLP3 Arabidopsis thaliana AT4G38340 I
BGIOSGA003095 Oryza indica BGIOSGA003095 I
BGIOSGA007168 Oryza indica BGIOSGA007168 I
BGIOSGA011521 Oryza indica BGIOSGA011521 I
BGIOSGA016686 Oryza indica BGIOSGA016686 I
BGIOSGA031219 Oryza indica BGIOSGA031219 I
BGIOSGA034185 Oryza indica BGIOSGA034185 I
Bo1g006600 Brassica oleracea Bo1g006600 I
Bo1g037430 Brassica oleracea Bo1g037430 I
Bo3g036620 Brassica oleracea Bo3g036620 I
Bo3g092260 Brassica oleracea Bo3g092260 I
Bo4g019840 Brassica oleracea Bo4g019840 I
Bo4g194380 Brassica oleracea Bo4g194380 I
Bo5g030540 Brassica oleracea Bo5g030540 I
Bo6g076560 Brassica oleracea Bo6g076560 I
Bo6g120380 Brassica oleracea Bo6g120380 I
Bo7g014920 Brassica oleracea Bo7g014920 I
Bo7g061470 Brassica oleracea Bo7g061470 I
Bo7g109290 Brassica oleracea Bo7g109290 I
Bo7g117300 Brassica oleracea Bo7g117300 I
Bo7g119810 Brassica oleracea Bo7g119810 I
Bo8g070310 Brassica oleracea Bo8g070310 I
Bo9g032270 Brassica oleracea Bo9g032270 I
Bostr.18351s0175 Boechera stricta Bostr.18351s0175 I
Bostr.20129s0072 Boechera stricta Bostr.20129s0072 I
Bostr.20903s0181 Boechera stricta Bostr.20903s0181 I
Bostr.25542s0020 Boechera stricta Bostr.25542s0020 I
Bostr.25993s0430 Boechera stricta Bostr.25993s0430 I
Bostr.7128s0657 Boechera stricta Bostr.7128s0657 I
Bostr.7867s0209 Boechera stricta Bostr.7867s0209 I
Bostr.7867s1388 Boechera stricta Bostr.7867s1388 I
Bra000307 Brassica rapa Bra000307 I
Bra002025 Brassica rapa Bra002025 I
Bra003382 Brassica rapa Bra003382 I
Bra004767 Brassica rapa Bra004767 I
Bra009659 Brassica rapa Bra009659 I
Bra011600 Brassica rapa Bra011600 I
Bra012241 Brassica rapa Bra012241 I
Bra013754 Brassica rapa Bra013754 I
Bra015758 Brassica rapa Bra015758 I
Bra016458 Brassica rapa Bra016458 I
Bra017705 Brassica rapa Bra017705 I
Bra019251 Brassica rapa Bra019251 I
Bra025834 Brassica rapa Bra025834 I
Bra033561 Brassica rapa Bra033561 I
Bra037711 Brassica rapa Bra037711 I
Bra040914 Brassica rapa Bra040914 I
BRADI1G76340 Brachypodium distachyon BRADI1G76340 I
BRADI2G08177 Brachypodium distachyon BRADI2G08177 I
BRADI2G31710 Brachypodium distachyon BRADI2G31710 I
BRADI3G03170 Brachypodium distachyon BRADI3G03170 I
BRADI4G20730 Brachypodium distachyon BRADI4G20730 I
BRADI4G37147 Brachypodium distachyon BRADI4G37147 I
BRADI5G23300 Brachypodium distachyon BRADI5G23300 I
Cagra.0799s0105 Capsella grandiflora Cagra.0799s0105 I
Cagra.0805s0015 Capsella grandiflora Cagra.0805s0015 I
Cagra.1226s0068 Capsella grandiflora Cagra.1226s0068 I
Cagra.1383s0021 Capsella grandiflora Cagra.1383s0021 I
Cagra.2350s0071 Capsella grandiflora Cagra.2350s0071 I
Cagra.3706s0034 Capsella grandiflora Cagra.3706s0034 I
Cagra.3790s0010 Capsella grandiflora Cagra.3790s0010 I
Cagra.5954s0011 Capsella grandiflora Cagra.5954s0011 I
Cagra.6160s0032 Capsella grandiflora Cagra.6160s0032 I
Carubv10004068m.g Capsella rubella Carubv10004068m.g I
Carubv10004076m.g Capsella rubella Carubv10004076m.g I
Carubv10006357m.g Capsella rubella Carubv10006357m.g I
Carubv10008300m.g Capsella rubella Carubv10008300m.g I
Carubv10012927m.g Capsella rubella Carubv10012927m.g I
Carubv10016665m.g Capsella rubella Carubv10016665m.g I
Carubv10019754m.g Capsella rubella Carubv10019754m.g I
Carubv10019812m.g Capsella rubella Carubv10019812m.g I
Carubv10022595m.g Capsella rubella Carubv10022595m.g I
cassava1116.valid.m1 Manihot esculenta cassava1116.valid.m1 I
cassava18621.valid.m1 Manihot esculenta cassava18621.valid.m1 I
cassava42764.valid.m1 Manihot esculenta cassava42764.valid.m1 I
cassava42780.valid.m1 Manihot esculenta cassava42780.valid.m1 I
cassava43767.valid.m1 Manihot esculenta cassava43767.valid.m1 I
cassava7989.valid.m1 Manihot esculenta cassava7989.valid.m1 I
cassava8363.valid.m1 Manihot esculenta cassava8363.valid.m1 I
Ca_02703 Cicer arietinum Ca_02703 I
Ca_04456 Cicer arietinum Ca_04456 I
Ca_04834 Cicer arietinum Ca_04834 I
Ca_09832 Cicer arietinum Ca_09832 I
Ca_13679 Cicer arietinum Ca_13679 I
chr1.CM0178.280.nc Lotus japonicus chr1.CM0178.280.nc I
chr2.CM0102.390.nc Lotus japonicus chr2.CM0102.390.nc I
chr2.CM0904.130.nd Lotus japonicus chr2.CM0904.130.nd I
chr3.CM0106.760.nc Lotus japonicus chr3.CM0106.760.nc I
chr3.LjT23H01.20.nc Lotus japonicus chr3.LjT23H01.20.nc I
Ciclev10000188m.g Citrus clementina Ciclev10000188m.g I
Ciclev10018669m.g Citrus clementina Ciclev10018669m.g I
Ciclev10018744m.g Citrus clementina Ciclev10018744m.g I
Ciclev10027765m.g Citrus clementina Ciclev10027765m.g I
Cla013002 Citrullus lanatus Cla013002 I
Cla013030 Citrullus lanatus Cla013030 I
Cla023812 Citrullus lanatus Cla023812 I
Cucsa.095510 Cucumis sativus Cucsa.095510 I
Cucsa.114750 Cucumis sativus Cucsa.114750 I
Cucsa.272130 Cucumis sativus Cucsa.272130 I
estExt_Genewise1.C_2500013 Physcomitrella patens estExt_Genewise1.C_2500013 I
estExt_Genewise1.C_260189 Physcomitrella patens estExt_Genewise1.C_260189 I
estExt_gwp_gw1.C_1280044 Physcomitrella patens estExt_gwp_gw1.C_1280044 I
Eucgr.A00040 Eucalyptus grandis Eucgr.A00040 I
Eucgr.E01022 Eucalyptus grandis Eucgr.E01022 I
Eucgr.F01779 Eucalyptus grandis Eucgr.F01779 I
Eucgr.G01859 Eucalyptus grandis Eucgr.G01859 I
Eucgr.I01519 Eucalyptus grandis Eucgr.I01519 I
evm.TU.supercontig_26.186 Carica papaya evm.TU.supercontig_26.186 I
evm.TU.supercontig_9.328 Carica papaya evm.TU.supercontig_9.328 I
F775_06752 Aegilops tauschii F775_06752 I
F775_07477 Aegilops tauschii F775_07477 I
F775_09781 Aegilops tauschii F775_09781 I
F775_13111 Aegilops tauschii F775_13111 I
F775_15797 Aegilops tauschii F775_15797 I
F775_17765 Aegilops tauschii F775_17765 I
fgenesh1_pg.C_scaffold_7000014 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000014 I
fgenesh2_kg.1__2251__AT1G20640.2 Arabidopsis lyrata fgenesh2_kg.1__2251__AT1G20640.2 I
fgenesh2_kg.2__1918__AT1G76350.1 Arabidopsis lyrata fgenesh2_kg.2__1918__AT1G76350.1 I
fgenesh2_kg.2__24__AT1G64530.1 Arabidopsis lyrata fgenesh2_kg.2__24__AT1G64530.1 I
fgenesh2_kg.4__2522__AT2G43500.1 Arabidopsis lyrata fgenesh2_kg.4__2522__AT2G43500.1 I
NLP7 Arabidopsis lyrata fgenesh2_kg.7__1893__AT4G24020.1 I
fgenesh2_kg.7__555__AT4G35270.1 Arabidopsis lyrata fgenesh2_kg.7__555__AT4G35270.1 I
gene10914-v1.0-hybrid Fragaria vesca gene10914-v1.0-hybrid I
gene16194-v1.0-hybrid Fragaria vesca gene16194-v1.0-hybrid I
gene25113-v1.0-hybrid Fragaria vesca gene25113-v1.0-hybrid I
GLYMA02G48080 Glycine max GLYMA02G48080 I
GLYMA04G00210 Glycine max GLYMA04G00210 I
GLYMA04G01910 Glycine max GLYMA04G01910 I
GLYMA06G00240 Glycine max GLYMA06G00240 I
GLYMA06G02030 Glycine max GLYMA06G02030 I
GLYMA09G25230 Glycine max GLYMA09G25230 I
GLYMA10G37860 Glycine max GLYMA10G37860 I
GLYMA11G13390 Glycine max GLYMA11G13390 I
GLYMA12G05390 Glycine max GLYMA12G05390 I
GLYMA13G42160 Glycine max GLYMA13G42160 I
GLYMA14G00470 Glycine max GLYMA14G00470 I
GLYMA15G03225 Glycine max GLYMA15G03225 I
GLYMA16G30180 Glycine max GLYMA16G30180 I
GLYMA20G29960 Glycine max GLYMA20G29960 I
Gorai.002G115800 Gossypium raimondii Gorai.002G115800 I
Gorai.002G206700 Gossypium raimondii Gorai.002G206700 I
Gorai.003G074300 Gossypium raimondii Gorai.003G074300 I
Gorai.004G131700 Gossypium raimondii Gorai.004G131700 I
Gorai.005G013500 Gossypium raimondii Gorai.005G013500 I
Gorai.005G126000 Gossypium raimondii Gorai.005G126000 I
Gorai.005G259100 Gossypium raimondii Gorai.005G259100 I
Gorai.006G206500 Gossypium raimondii Gorai.006G206500 I
Gorai.008G041100 Gossypium raimondii Gorai.008G041100 I
Gorai.009G187500 Gossypium raimondii Gorai.009G187500 I
Gorai.011G138700 Gossypium raimondii Gorai.011G138700 I
GRMZM2G031398 Zea mays GRMZM2G031398 I
GRMZM2G042278 Zea mays GRMZM2G042278 I
GRMZM2G048582 Zea mays GRMZM2G048582 I
GRMZM2G053298 Zea mays GRMZM2G053298 I
GRMZM2G105004 Zea mays GRMZM2G105004 I
GRMZM2G109509 Zea mays GRMZM2G109509 I
GRMZM2G176655 Zea mays GRMZM2G176655 I
GRMZM2G375675 Zea mays GRMZM2G375675 I
GRMZM2G475305 Zea mays GRMZM2G475305 I
GSMUA_Achr11G22400_001 Musa acuminata GSMUA_Achr11G22400_001 I
GSMUA_Achr1G18080_001 Musa acuminata GSMUA_Achr1G18080_001 I
GSMUA_Achr2G05790_001 Musa acuminata GSMUA_Achr2G05790_001 I
GSMUA_Achr3G03250_001 Musa acuminata GSMUA_Achr3G03250_001 I
GSMUA_Achr3G14760_001 Musa acuminata GSMUA_Achr3G14760_001 I
GSMUA_Achr3G25240_001 Musa acuminata GSMUA_Achr3G25240_001 I
GSMUA_Achr6G28700_001 Musa acuminata GSMUA_Achr6G28700_001 I
GSMUA_Achr8G04280_001 Musa acuminata GSMUA_Achr8G04280_001 I
GSMUA_Achr8G28910_001 Musa acuminata GSMUA_Achr8G28910_001 I
GSMUA_AchrUn_randomG00660_001 Musa acuminata GSMUA_AchrUn_randomG00660_001 I
gw1.109.16.1 Physcomitrella patens gw1.109.16.1 I
LPERR01G07660 Leersia perrieri LPERR01G07660 I
LPERR02G02700 Leersia perrieri LPERR02G02700 I
LPERR03G02280 Leersia perrieri LPERR03G02280 I
LPERR09G14430 Leersia perrieri LPERR09G14430 I
LPERR11G07920 Leersia perrieri LPERR11G07920 I
Lus10003199.g Linum usitatissimum Lus10003199.g I
Lus10008143.g Linum usitatissimum Lus10008143.g I
Lus10012257.g Linum usitatissimum Lus10012257.g I
Lus10013224.g Linum usitatissimum Lus10013224.g I
Lus10014428.g Linum usitatissimum Lus10014428.g I
Lus10014429.g Linum usitatissimum Lus10014429.g I
Lus10016018.g Linum usitatissimum Lus10016018.g I
Lus10019368.g Linum usitatissimum Lus10019368.g I
Lus10022621.g Linum usitatissimum Lus10022621.g I
Lus10023049.g Linum usitatissimum Lus10023049.g I
Lus10023930.g Linum usitatissimum Lus10023930.g I
Lus10023931.g Linum usitatissimum Lus10023931.g I
Lus10030744.g Linum usitatissimum Lus10030744.g I
MDP0000132856 Malus domestica MDP0000132856 I
MDP0000239938 Malus domestica MDP0000239938 I
MDP0000246881 Malus domestica MDP0000246881 I
MDP0000265619 Malus domestica MDP0000265619 I
MDP0000584547 Malus domestica MDP0000584547 I
MDP0000788505 Malus domestica MDP0000788505 I
mgf000393m Mimulus guttatus mgf000393m I
mgf003368m Mimulus guttatus mgf003368m I
mgf005725m Mimulus guttatus mgf005725m I
mgf012360m Mimulus guttatus mgf012360m I
mgf013203m Mimulus guttatus mgf013203m I
mgf013792m Mimulus guttatus mgf013792m I
MLOC_13610 Hordeum vulgare MLOC_13610 I
MLOC_37423 Hordeum vulgare MLOC_37423 I
MLOC_53458 Hordeum vulgare MLOC_53458 I
MLOC_66539 Hordeum vulgare MLOC_66539 I
MLOC_9982 Hordeum vulgare MLOC_9982 I
MTR_0022s0430 Medicago truncatula MTR_0022s0430 I
MTR_1g100970 Medicago truncatula MTR_1g100970 I
MTR_2g099350 Medicago truncatula MTR_2g099350 I
MTR_3g115400 Medicago truncatula MTR_3g115400 I
MTR_4g068000 Medicago truncatula MTR_4g068000 I
MTR_5g099060 Medicago truncatula MTR_5g099060 I
OB01G18870 Oryza brachyantha OB01G18870 I
OB02G12720 Oryza brachyantha OB02G12720 I
OB03G12460 Oryza brachyantha OB03G12460 I
OB04G24560 Oryza brachyantha OB04G24560 I
OB09G25360 Oryza brachyantha OB09G25360 I
OB11G17130 Oryza brachyantha OB11G17130 I
OBART01G08660 Oryza barthii OBART01G08660 I
OBART02G02910 Oryza barthii OBART02G02910 I
OBART03G02480 Oryza barthii OBART03G02480 I
OBART04G17320 Oryza barthii OBART04G17320 I
OBART09G18730 Oryza barthii OBART09G18730 I
OBART11G09000 Oryza barthii OBART11G09000 I
OGLUM01G09910 Oryza glumaepatula OGLUM01G09910 I
OGLUM02G02840 Oryza glumaepatula OGLUM02G02840 I
OGLUM03G02410 Oryza glumaepatula OGLUM03G02410 I
OGLUM04G17360 Oryza glumaepatula OGLUM04G17360 I
OGLUM09G19240 Oryza glumaepatula OGLUM09G19240 I
OGLUM11G08660 Oryza glumaepatula OGLUM11G08660 I
OLONG_004527 Oryza longistaminata OLONG_004527 I
OLONG_005878 Oryza longistaminata OLONG_005878 I
OLONG_006342 Oryza longistaminata OLONG_006342 I
OLONG_009319 Oryza longistaminata OLONG_009319 I
OLONG_014948 Oryza longistaminata OLONG_014948 I
OLONG_027263 Oryza longistaminata OLONG_027263 I
OMERI01G08690 Oryza meridionalis OMERI01G08690 I
OMERI02G03550 Oryza meridionalis OMERI02G03550 I
OMERI03G02340 Oryza meridionalis OMERI03G02340 I
OMERI04G14630 Oryza meridionalis OMERI04G14630 I
OMERI06G03620 Oryza meridionalis OMERI06G03620 I
OMERI11G08010 Oryza meridionalis OMERI11G08010 I
ONIVA01G11240 Oryza nivara ONIVA01G11240 I
ONIVA02G02790 Oryza nivara ONIVA02G02790 I
ONIVA03G02090 Oryza nivara ONIVA03G02090 I
ONIVA04G15630 Oryza nivara ONIVA04G15630 I
ONIVA09G19860 Oryza nivara ONIVA09G19860 I
ONIVA11G08980 Oryza nivara ONIVA11G08980 I
OPUNC01G08520 Oryza punctata OPUNC01G08520 I
OPUNC02G02320 Oryza punctata OPUNC02G02320 I
OPUNC03G02270 Oryza punctata OPUNC03G02270 I
OPUNC04G15130 Oryza punctata OPUNC04G15130 I
OPUNC09G17100 Oryza punctata OPUNC09G17100 I
OPUNC11G08590 Oryza punctata OPUNC11G08590 I
orange1.1g001774m.g Citrus sinensis orange1.1g001774m.g I
orange1.1g002144m.g Citrus sinensis orange1.1g002144m.g I
orange1.1g002317m.g Citrus sinensis orange1.1g002317m.g I
orange1.1g004975m.g Citrus sinensis orange1.1g004975m.g I
ORGLA01G0077900 Oryza glaberrima ORGLA01G0077900 I
ORGLA03G0022700 Oryza glaberrima ORGLA03G0022700 I
ORGLA04G0144400 Oryza glaberrima ORGLA04G0144400 I
ORGLA09G0149200 Oryza glaberrima ORGLA09G0149200 I
ORGLA11G0080000 Oryza glaberrima ORGLA11G0080000 I
ORUFI01G09470 Oryza rufipogon ORUFI01G09470 I
ORUFI02G02860 Oryza rufipogon ORUFI02G02860 I
ORUFI03G02230 Oryza rufipogon ORUFI03G02230 I
ORUFI04G18750 Oryza rufipogon ORUFI04G18750 I
ORUFI09G20290 Oryza rufipogon ORUFI09G20290 I
ORUFI11G09500 Oryza rufipogon ORUFI11G09500 I
NLP3 Oryza sativa OS01G0236700 I
OS02G0136000 Oryza sativa OS02G0136000 I
NLP1 Oryza sativa OS03G0131100 I
OS04G0495800 Oryza sativa OS04G0495800 I
OS09G0549450 Oryza sativa OS09G0549450 I
Pavir.Aa03213 Panicum virgatum Pavir.Aa03213 I
Pavir.Ab00331 Panicum virgatum Pavir.Ab00331 I
Pavir.Bb02544 Panicum virgatum Pavir.Bb02544 I
Pavir.Ca00444 Panicum virgatum Pavir.Ca00444 I
Pavir.Eb00046 Panicum virgatum Pavir.Eb00046 I
Pavir.Ga01502 Panicum virgatum Pavir.Ga01502 I
Pavir.Ia04472 Panicum virgatum Pavir.Ia04472 I
Pavir.J12574 Panicum virgatum Pavir.J12574 I
Pavir.J25840 Panicum virgatum Pavir.J25840 I
Pavir.J35714 Panicum virgatum Pavir.J35714 I
Pavir.J38126 Panicum virgatum Pavir.J38126 I
PDK_20s1356112g004 Phoenix dactylifera PDK_20s1356112g004 I
PDK_20s1399311g003 Phoenix dactylifera PDK_20s1399311g003 I
PDK_20s1462471g002 Phoenix dactylifera PDK_20s1462471g002 I
PDK_20s1507761g001 Phoenix dactylifera PDK_20s1507761g001 I
PDK_20s1533061g001 Phoenix dactylifera PDK_20s1533061g001 I
PDK_20s1704851g001 Phoenix dactylifera PDK_20s1704851g001 I
PGSC0003DMG400005871 Solanum tuberosum PGSC0003DMG400005871 I
PGSC0003DMG400009909 Solanum tuberosum PGSC0003DMG400009909 I
PGSC0003DMG400013140 Solanum tuberosum PGSC0003DMG400013140 I
PGSC0003DMG401005796 Solanum tuberosum PGSC0003DMG401005796 I
PGSC0003DMG402012256 Solanum tuberosum PGSC0003DMG402012256 I
PK00728.1 Cannabis sativa PK00728.1 I
PK12462.1 Cannabis sativa PK12462.1 I
PK19092.1 Cannabis sativa PK19092.1 I
PK27147.1 Cannabis sativa PK27147.1 I
Pm020817 Prunus mume Pm020817 I
Pm022106 Prunus mume Pm022106 I
Pm022964 Prunus mume Pm022964 I
Pm024166 Prunus mume Pm024166 I
POPTR_0001s10970 Populus trichocarpa POPTR_0001s10970 I
POPTR_0001s30040 Populus trichocarpa POPTR_0001s30040 I
POPTR_0002s01060 Populus trichocarpa POPTR_0002s01060 I
POPTR_0003s14300 Populus trichocarpa POPTR_0003s14300 I
POPTR_0004s21550 Populus trichocarpa POPTR_0004s21550 I
POPTR_0005s27310 Populus trichocarpa POPTR_0005s27310 I
POPTR_0007s01530 Populus trichocarpa POPTR_0007s01530 I
POPTR_0009s09060 Populus trichocarpa POPTR_0009s09060 I
POPTR_0009s16790 Populus trichocarpa POPTR_0009s16790 I
POPTR_0009s16820 Populus trichocarpa POPTR_0009s16820 I
POPTR_0009s16830 Populus trichocarpa POPTR_0009s16830 I
POPTR_0016s04220 Populus trichocarpa POPTR_0016s04220 I
POPTR_0017s04980 Populus trichocarpa POPTR_0017s04980 I
PRUPE_ppa000933mg Prunus persica PRUPE_ppa000933mg I
PRUPE_ppa001086mg Prunus persica PRUPE_ppa001086mg I
PRUPE_ppa018195mg Prunus persica PRUPE_ppa018195mg I
SapurV1A.0005s0310 Salix purpurea SapurV1A.0005s0310 I
SapurV1A.0016s0650 Salix purpurea SapurV1A.0016s0650 I
SapurV1A.0018s0830 Salix purpurea SapurV1A.0018s0830 I
SapurV1A.0019s0420 Salix purpurea SapurV1A.0019s0420 I
SapurV1A.0035s0170 Salix purpurea SapurV1A.0035s0170 I
SapurV1A.0118s0470 Salix purpurea SapurV1A.0118s0470 I
SapurV1A.0125s0380 Salix purpurea SapurV1A.0125s0380 I
SapurV1A.0125s0390 Salix purpurea SapurV1A.0125s0390 I
SapurV1A.0266s0390 Salix purpurea SapurV1A.0266s0390 I
SapurV1A.0374s0230 Salix purpurea SapurV1A.0374s0230 I
SapurV1A.1186s0030 Salix purpurea SapurV1A.1186s0030 I
SapurV1A.3634s0010 Salix purpurea SapurV1A.3634s0010 I
Sb01g048290 Sorghum bicolor Sb01g048290 I
Sb02g031970 Sorghum bicolor Sb02g031970 I
Sb03g000490 Sorghum bicolor Sb03g000490 I
Sb04g002940 Sorghum bicolor Sb04g002940 I
Sb06g021370 Sorghum bicolor Sb06g021370 I
SELMODRAFT_172537 Selaginella moellendorffii SELMODRAFT_172537 I
SELMODRAFT_40936 Selaginella moellendorffii SELMODRAFT_40936 I
SELMODRAFT_51069 Selaginella moellendorffii SELMODRAFT_51069 I
SELMODRAFT_61084 Selaginella moellendorffii SELMODRAFT_61084 I
Si000216m.g Setaria italica Si000216m.g I
Si013186m.g Setaria italica Si013186m.g I
Si016430m.g Setaria italica Si016430m.g I
Si021160m.g Setaria italica Si021160m.g I
Si025974m.g Setaria italica Si025974m.g I
Si028915m.g Setaria italica Si028915m.g I
Si034133m.g Setaria italica Si034133m.g I
Solyc01g112190.2 Solanum lycopersicum Solyc01g112190.2 I
Solyc04g082480.2 Solanum lycopersicum Solyc04g082480.2 I
Solyc08g008410.2 Solanum lycopersicum Solyc08g008410.2 I
Solyc08g013900.2 Solanum lycopersicum Solyc08g013900.2 I
Solyc11g045350.1 Solanum lycopersicum Solyc11g045350.1 I
TCM_006453 Theobroma cacao TCM_006453 I
TCM_016510 Theobroma cacao TCM_016510 I
TCM_019949 Theobroma cacao TCM_019949 I
TCM_034391 Theobroma cacao TCM_034391 I
Thhalv10001299m.g Eutrema salsugineum Thhalv10001299m.g I
Thhalv10005779m.g Eutrema salsugineum Thhalv10005779m.g I
Thhalv10006790m.g Eutrema salsugineum Thhalv10006790m.g I
Thhalv10018128m.g Eutrema salsugineum Thhalv10018128m.g I
Thhalv10022536m.g Eutrema salsugineum Thhalv10022536m.g I
Thhalv10023271m.g Eutrema salsugineum Thhalv10023271m.g I
Thhalv10024319m.g Eutrema salsugineum Thhalv10024319m.g I
Thhalv10024328m.g Eutrema salsugineum Thhalv10024328m.g I
Thhalv10024524m.g Eutrema salsugineum Thhalv10024524m.g I
TRAES3BF007400020CFD_g Triticum aestivum TRAES3BF007400020CFD_g I
Traes_2AL_0F613C5AB Triticum aestivum Traes_2AL_0F613C5AB I
Traes_2BL_2784BC27C Triticum aestivum Traes_2BL_2784BC27C I
Traes_2DL_EE2EDAB78 Triticum aestivum Traes_2DL_EE2EDAB78 I
Traes_3AS_E01675F4E Triticum aestivum Traes_3AS_E01675F4E I
Traes_3DS_E1D759A90 Triticum aestivum Traes_3DS_E1D759A90 I
Traes_4AL_F5C91EC4A Triticum aestivum Traes_4AL_F5C91EC4A I
Traes_4BS_43C44F47B Triticum aestivum Traes_4BS_43C44F47B I
Traes_4DL_E6F4A32C9 Triticum aestivum Traes_4DL_E6F4A32C9 I
Traes_4DS_38EA63379 Triticum aestivum Traes_4DS_38EA63379 I
Traes_5AL_315285EFC Triticum aestivum Traes_5AL_315285EFC I
Traes_5AL_315285EFC1 Triticum aestivum Traes_5AL_315285EFC1 I
Traes_5AL_3312FD71F Triticum aestivum Traes_5AL_3312FD71F I
Traes_5BL_462E6AA25 Triticum aestivum Traes_5BL_462E6AA25 I
Traes_5DL_11A35E16D Triticum aestivum Traes_5DL_11A35E16D I
Traes_6AS_90DEDA6E3 Triticum aestivum Traes_6AS_90DEDA6E3 I
Traes_6BS_F2B8B4E55 Triticum aestivum Traes_6BS_F2B8B4E55 I
Traes_6DS_3D001FAB6 Triticum aestivum Traes_6DS_3D001FAB6 I
TRIUR3_11978 Triticum urartu TRIUR3_11978 I
TRIUR3_19333 Triticum urartu TRIUR3_19333 I
TRIUR3_22305 Triticum urartu TRIUR3_22305 I
TRIUR3_26920 Triticum urartu TRIUR3_26920 I
VIT_02s0025g02070 Vitis vinifera VIT_02s0025g02070 I
VIT_03s0038g03710 Vitis vinifera VIT_03s0038g03710 I
VIT_05s0094g00020 Vitis vinifera VIT_05s0094g00020 I
VIT_18s0122g01290 Vitis vinifera VIT_18s0122g01290 I