CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Hoxc9 *(Mus musculus)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSMUSG00000036139	T212486_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hoxc9 M00470_2.00	Mus musculus	NGTAATWAAN	NTTWATTACN	PBM Berger et al.(2008) Hoxc9_2367	(Direct)	(Direct)
Hoxc9 M08137_2.00	Mus musculus	NWGATTTATDGSH	DSCHATAAATCWN	ChIP-seq Mathelier et al.(2014) MA0485.1	(Direct)	(Direct)
Hoxc9 M09574_2.00	Mus musculus	TGATTTATDGCH	DGCHATAAATCA	Misc Heinz et al.(2010) Ainv15-Hoxc9_GSE21812	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HOXC9 M05331_2.00	Homo sapiens	GTCGTAAAAN	NTTTTACGAC	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_1	0.858	0.982
HOXC9 M05332_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_2	0.858	0.982
HOXC9 M09161_2.00	Homo sapiens	HTTWATKGCH	DGCMATWAAD	Misc Kulakovskiy et al.(2013) HXC9_HUMAN.H11MO.0.C	0.858	0.982
HOXC9 M05333_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_1	0.858	0.982
HOXC9 M05334_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_2	0.858	0.982
Hoxd9 M03282_2.00	Mus musculus	TTTWATKKB	VMMATWAAA	SELEX Jolma et al.(2013) Hoxd9_1	0.846	0.965
Hoxd9 M03283_2.00	Mus musculus	DWTTWATKRY	RYMATWAAWH	SELEX Jolma et al.(2013) Hoxd9_2	0.846	0.965
Hoxd9 M03284_2.00	Mus musculus	DTTWAYGRB	VYCRTWAAH	SELEX Jolma et al.(2013) Hoxd9_3	0.846	0.965
HOXD9 M05104_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_1	0.846	0.965
HOXD9 M05105_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_2	0.846	0.965
HOXD9 M05108_2.00	Homo sapiens	RTCGTAAAWN	NWTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_1	0.846	0.965
HOXD9 M05109_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_2	0.846	0.965
HOXD9 M10686_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD9_Q2	0.846	0.965
HOXD9 M05106_2.00	Homo sapiens	NNTTWATKRC	GYMATWAANN	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_1	0.846	0.965
HOXD9 M05107_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_2	0.846	0.965
HOXD9 M05110_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_1	0.846	0.965
HOXD9 M05111_2.00	Homo sapiens	NDTTWATKRC	GYMATWAAHN	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_2	0.846	0.965
Hoxa9 M00475_2.00	Mus musculus	NNDDBNNN	NNNVHHNN	PBM Berger et al.(2008) Hoxa9_2622	0.846	0.947
HOXA9 M03085_2.00	Homo sapiens	NNDTTWAYGAYN	NRTCRTWAAHNN	SELEX Jolma et al.(2013) HOXA10_1	0.846	0.947
HOXA9 M03086_2.00	Homo sapiens	NDTTWATKRYN	NRYMATWAAHN	SELEX Jolma et al.(2013) HOXA10_2	0.846	0.947
HOXA9 M04932_2.00	Homo sapiens	NNDWWABKRC	GYMVTWWHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_1	0.846	0.947
HOXA9 M04933_2.00	Homo sapiens	NNDTWAYGRB	VYCRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_2	0.846	0.947
Hoxa9 M08138_2.00	Mus musculus	TGATTKATKRB	VYMATMAATCA	ChIP-seq Mathelier et al.(2014) MA0594.1	0.846	0.947
HOXA9 M09130_2.00	Homo sapiens	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_HUMAN.H11MO.0.C	0.846	0.947
HOXA9 M09131_2.00	Homo sapiens	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_HUMAN.H11MO.0.B	0.846	0.947
Hoxa9 M09203_2.00	Mus musculus	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_MOUSE.H11MO.0.B	0.846	0.947
Hoxa9 M09575_2.00	Mus musculus	WGATTKATDRBY	RVYHATMAATCW	Misc Heinz et al.(2010) HSC-Hoxa9_GSE33509	0.846	0.947
HOXA9 M10642_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q6	0.846	0.947
HOXA9 M10643_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_04	0.846	0.947
HOXA9 M10644_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5_01	0.846	0.947
HOXA9 M10645_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5	0.846	0.947
HOXA9 M04934_2.00	Homo sapiens	NNDTWAYKRC	GYMRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_1	0.846	0.947
HOXA9 M04935_2.00	Homo sapiens	NNDTWACGAY	RTCGTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_2	0.846	0.947
Hoxb9 M00410_2.00	Mus musculus	NTTWAYDDNN	NNHHRTWAAN	PBM Berger et al.(2008) Hoxb9_3413	0.846	0.930
HOXB9 M05289_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_1	0.846	0.930
HOXB9 M05290_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_2	0.846	0.930
HOXB9 M05291_2.00	Homo sapiens	GTCGTAAAHB	VDTTTACGAC	SELEX Yin et al.(2017) HOXB9_eDBD_Methyl-HT-SELEX	0.846	0.930
Hoxc10 M00421_2.00	Mus musculus	TTWATKAB	VTMATWAA	PBM Berger et al.(2008) Hoxc10_2779	0.798	0.807
Hoxd10 M00509_2.00	Mus musculus	NNNNNNNN	NNNNNNNN	PBM Berger et al.(2008) Hoxd10_2368	0.798	0.807
HOXC10 M03228_2.00	Homo sapiens	DTTTWATKDB	VHMATWAAAH	SELEX Jolma et al.(2013) HOXC10_1	0.798	0.807
HOXC10 M03229_2.00	Homo sapiens	NNTTWATKRB	VYMATWAANN	SELEX Jolma et al.(2013) HOXC10_2	0.798	0.807
HOXC10 M03230_2.00	Homo sapiens	NWTTWAYGAB	VTCRTWAAWN	SELEX Jolma et al.(2013) HOXC10_3	0.798	0.807
Hoxc10 M03252_2.00	Mus musculus	DTTTWAYGAY	RTCRTWAAAH	SELEX Jolma et al.(2013) Hoxc10_1	0.798	0.807
Hoxc10 M03253_2.00	Mus musculus	DTTTWATKRY	RYMATWAAAH	SELEX Jolma et al.(2013) Hoxc10_2	0.798	0.807
HOXC10 M05335_2.00	Homo sapiens	NDTTTATKRCN	NGYMATAAAHN	SELEX Yin et al.(2017) HOXC10_eDBD_HT-SELEX_1	0.798	0.807
HOXC10 M05336_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC10_eDBD_HT-SELEX_2	0.798	0.807
HOXC10 M05339_2.00	Homo sapiens	NTTTTATKRCN	NGYMATAAAAN	SELEX Yin et al.(2017) HOXC10_FL_HT-SELEX_1	0.798	0.807
HOXC10 M05340_2.00	Homo sapiens	NRTCGTAAAWN	NWTTTACGAYN	SELEX Yin et al.(2017) HOXC10_FL_HT-SELEX_2	0.798	0.807
HOXD10 M05112_2.00	Homo sapiens	NKTTTATKRC	GYMATAAAMN	SELEX Yin et al.(2017) HOXD10_eDBD_HT-SELEX_1	0.798	0.807
HOXD10 M05113_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXD10_eDBD_HT-SELEX_2	0.798	0.807
HOXD10 M05116_2.00	Homo sapiens	RGTCGTAAAAH	DTTTTACGACY	SELEX Yin et al.(2017) HOXD10_FL_HT-SELEX_1	0.798	0.807
HOXD10 M05117_2.00	Homo sapiens	RRYMATAAAAH	DTTTTATKRYY	SELEX Yin et al.(2017) HOXD10_FL_HT-SELEX_2	0.798	0.807
HOXD10 M10687_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD10_Q2	0.798	0.807
HOXD10 M10688_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD10_Q6	0.798	0.807
HOXC10 M05337_2.00	Homo sapiens	NTTTTATKRCN	NGYMATAAAAN	SELEX Yin et al.(2017) HOXC10_eDBD_Methyl-HT-SELEX_1	0.798	0.807
HOXC10 M05338_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC10_eDBD_Methyl-HT-SELEX_2	0.798	0.807
HOXC10 M05341_2.00	Homo sapiens	DTTTTATKRCH	DGYMATAAAAH	SELEX Yin et al.(2017) HOXC10_FL_Methyl-HT-SELEX_1	0.798	0.807
HOXC10 M05342_2.00	Homo sapiens	VGTCGTAAAHN	NDTTTACGACB	SELEX Yin et al.(2017) HOXC10_FL_Methyl-HT-SELEX_2	0.798	0.807
HOXD10 M05114_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD10_eDBD_Methyl-HT-SELEX_1	0.798	0.807
HOXD10 M05115_2.00	Homo sapiens	GTCGTAAAHN	NDTTTACGAC	SELEX Yin et al.(2017) HOXD10_eDBD_Methyl-HT-SELEX_2	0.798	0.807
HOXD10 M05118_2.00	Homo sapiens	VGTCGTAAAAH	DTTTTACGACB	SELEX Yin et al.(2017) HOXD10_FL_Methyl-HT-SELEX_1	0.798	0.807
HOXD10 M05119_2.00	Homo sapiens	DGYAATAAAAH	DTTTTATTRCH	SELEX Yin et al.(2017) HOXD10_FL_Methyl-HT-SELEX_2	0.798	0.807
Hoxa10 M00382_2.00	Mus musculus	NHWAYNNNN	NNNNRTWDN	PBM Berger et al.(2008) Hoxa10_2318	0.796	0.807
HOXA10 M05394_2.00	Homo sapiens	RRTCGTAAAAH	DTTTTACGAYY	SELEX Yin et al.(2017) HOXA10_eDBD_HT-SELEX_1	0.796	0.807
HOXA10 M05395_2.00	Homo sapiens	NTTTTATKRCY	RGYMATAAAAN	SELEX Yin et al.(2017) HOXA10_eDBD_HT-SELEX_2	0.796	0.807
HOXA10 M05398_2.00	Homo sapiens	NRTCRTWAANN	NNTTWAYGAYN	SELEX Yin et al.(2017) HOXA10_FL_HT-SELEX_1	0.796	0.807
HOXA10 M05399_2.00	Homo sapiens	NNTTWATKRCN	NGYMATWAANN	SELEX Yin et al.(2017) HOXA10_FL_HT-SELEX_2	0.796	0.807
Hoxa10 M09170_2.00	Mus musculus	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_MOUSE.H11MO.0.C	0.796	0.807
Hoxa10 M10763_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q5	0.796	0.807
HOXA10 M05396_2.00	Homo sapiens	NGTCGTAAAWN	NWTTTACGACN	SELEX Yin et al.(2017) HOXA10_eDBD_Methyl-HT-SELEX_1	0.796	0.807
HOXA10 M05397_2.00	Homo sapiens	NTTTTATKRCB	VGYMATAAAAN	SELEX Yin et al.(2017) HOXA10_eDBD_Methyl-HT-SELEX_2	0.796	0.807
HOXA10 M05400_2.00	Homo sapiens	NRTCGTWAANN	NNTTWACGAYN	SELEX Yin et al.(2017) HOXA10_FL_Methyl-HT-SELEX_1	0.796	0.807
HOXA10 M05401_2.00	Homo sapiens	NNTTWATKRYN	NRYMATWAANN	SELEX Yin et al.(2017) HOXA10_FL_Methyl-HT-SELEX_2	0.796	0.807
Hoxd11 M00493_2.00	Mus musculus	DDDNNNNN	NNNNNHHH	PBM Berger et al.(2008) Hoxd11_3873	0.742	0.684
HOXD11 M03139_2.00	Homo sapiens	RTCGTAAAWH	DWTTTACGAY	SELEX Jolma et al.(2013) HOXD11_1	0.742	0.684
HOXD11 M03140_2.00	Homo sapiens	TTTWATKRBH	DVYMATWAAA	SELEX Jolma et al.(2013) HOXD11_2	0.742	0.684
HOXD11 M05120_2.00	Homo sapiens	NRTCGTWAANNDTWAH	DTWAHNNTTWACGAYN	SELEX Yin et al.(2017) HOXD11_eDBD_HT-SELEX	0.742	0.684
HOXD11 M05121_2.00	Homo sapiens	NRTCGTWAAHNDTWAH	DTWAHNDTTWACGAYN	SELEX Yin et al.(2017) HOXD11_eDBD_Methyl-HT-SELEX	0.742	0.684
Hoxa11 M00474_2.00	Mus musculus	NNHNHNNNN	NNNNDNDNN	PBM Berger et al.(2008) Hoxa11_2218	0.742	0.667
Hoxa11 M03274_2.00	Mus musculus	NNDTTWAYGABN	NVTCRTWAAHNN	SELEX Jolma et al.(2013) Hoxa11_1	0.742	0.667
Hoxa11 M03275_2.00	Mus musculus	NDTTWATKRNN	NNYMATWAAHN	SELEX Jolma et al.(2013) Hoxa11_2	0.742	0.667
HOXA11 M04897_2.00	Homo sapiens	VGTCGTAAAWH	DWTTTACGACB	SELEX Yin et al.(2017) HOXA11_eDBD_HT-SELEX_1	0.742	0.667
HOXA11 M04898_2.00	Homo sapiens	DDTTWATKRSN	NSYMATWAAHH	SELEX Yin et al.(2017) HOXA11_eDBD_HT-SELEX_2	0.742	0.667
HOXA11 M04899_2.00	Homo sapiens	NRTCGTAAAWH	DWTTTACGAYN	SELEX Yin et al.(2017) HOXA11_eDBD_Methyl-HT-SELEX_1	0.742	0.667
HOXA11 M04900_2.00	Homo sapiens	DYTTTATKRCH	DGYMATAAARH	SELEX Yin et al.(2017) HOXA11_eDBD_Methyl-HT-SELEX_2	0.742	0.667
Hoxc11 M00390_2.00	Mus musculus	NTTWAYDDBN	NVHHRTWAAN	PBM Berger et al.(2008) Hoxc11_3718	0.742	0.649
HOXC11 M03131_2.00	Homo sapiens	NWTTWAYGAYH	DRTCRTWAAWN	SELEX Jolma et al.(2013) HOXC11_1	0.742	0.649
HOXC11 M03132_2.00	Homo sapiens	NWTTWATKRBH	DVYMATWAAWN	SELEX Jolma et al.(2013) HOXC11_2	0.742	0.649
HOXC11 M03133_2.00	Homo sapiens	DRTCGTWAAWN	NWTTWACGAYH	SELEX Jolma et al.(2013) HOXC11_3	0.742	0.649
HOXC11 M03134_2.00	Homo sapiens	NTTTTATKRBN	NVYMATAAAAN	SELEX Jolma et al.(2013) HOXC11_4	0.742	0.649
HOXC11 M05075_2.00	Homo sapiens	NDTTWACGAYN	NRTCGTWAAHN	SELEX Yin et al.(2017) HOXC11_eDBD_HT-SELEX_1	0.742	0.649
HOXC11 M05076_2.00	Homo sapiens	NWTTWATKRCH	DGYMATWAAWN	SELEX Yin et al.(2017) HOXC11_eDBD_HT-SELEX_2	0.742	0.649
HOXC11 M05079_2.00	Homo sapiens	NRTCGTWAAHN	NDTTWACGAYN	SELEX Yin et al.(2017) HOXC11_FL_HT-SELEX_1	0.742	0.649
HOXC11 M05080_2.00	Homo sapiens	NDTTWATKRSN	NSYMATWAAHN	SELEX Yin et al.(2017) HOXC11_FL_HT-SELEX_2	0.742	0.649
HOXC11 M05077_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC11_eDBD_Methyl-HT-SELEX_1	0.742	0.649
HOXC11 M05078_2.00	Homo sapiens	NDTTTATKRSN	NSYMATAAAHN	SELEX Yin et al.(2017) HOXC11_eDBD_Methyl-HT-SELEX_2	0.742	0.649
HOXC11 M05081_2.00	Homo sapiens	NRTCGTWAANN	NNTTWACGAYN	SELEX Yin et al.(2017) HOXC11_FL_Methyl-HT-SELEX_1	0.742	0.649
HOXC11 M05082_2.00	Homo sapiens	NNTTWAYKRSN	NSYMRTWAANN	SELEX Yin et al.(2017) HOXC11_FL_Methyl-HT-SELEX_2	0.742	0.649
Abd-B M00554_2.00	Drosophila melanogaster	NWTWAYDDNN	NNHHRTWAWN	PBM Busser et al.(2012a) Abd-B	0.671	0.737
Abd-B M03772_2.00	Drosophila melanogaster	DRTCRTAAAWH	DWTTTAYGAYH	SELEX Nitta et al.(2015) Abd-B_1	0.671	0.737
Abd-B M03773_2.00	Drosophila melanogaster	DTTTTATKRCY	RGYMATAAAAH	SELEX Nitta et al.(2015) Abd-B_2	0.671	0.737
Abd-B M03774_2.00	Drosophila melanogaster	NKCARYAACGACYW	WRGTCGTTRYTGMN	SELEX Nitta et al.(2015) Abd-B_3	0.671	0.737
Abd-B M03775_2.00	Drosophila melanogaster	DTTTWATGKSTTTY	RAAASMCATWAAAH	SELEX Nitta et al.(2015) Abd-B_4	0.671	0.737
Abd-B M06476_2.00	Drosophila melanogaster	TTTATKR	YMATAAA	B1H Mathelier et al.(2014) MA0165.1	0.671	0.737
Abd-B M06211_2.00	Drosophila melanogaster	YCATAAAA	TTTTATGR	B1H Zhu et al.(2011) Abd-B_FlyReg_FBgn0000015	0.671	0.737
Abd-B M09672_2.00	Drosophila melanogaster	YMATAAAAHH	DDTTTTATKR	Misc Kulakovskiy et al.(2009) Abd-B	0.671	0.737
Abd-B M10779_2.00	Drosophila melanogaster	VSNTTDATKRCNNN	NNNGYMATHAANSB	Transfac Matys et al.(2006) I$ABDB_01	0.671	0.737
Abd-B M10780_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDB_Q6	0.671	0.737
Hoxc8 M00391_2.00	Mus musculus	NNDNYNNNN	NNNNRNHNN	PBM Berger et al.(2008) Hoxc8_3429	0.634	0.754
Hoxb8 M00517_2.00	Mus musculus	NWWAYNDNN	NNHNRTWWN	PBM Berger et al.(2008) Hoxb8_3780	0.634	0.754
HOXB8 M05048_2.00	Homo sapiens	NTAATKRM	KYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_HT-SELEX	0.634	0.754
HOXC8 M04912_2.00	Homo sapiens	NYAATTRN	NYAATTRN	SELEX Yin et al.(2017) HOXC8_FL_HT-SELEX	0.634	0.754
HOXB8 M09141_2.00	Homo sapiens	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_HUMAN.H11MO.0.C	0.634	0.754
Hoxb8 M09214_2.00	Mus musculus	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_MOUSE.H11MO.0.C	0.634	0.754
HOXC8 M10636_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXC8_Q3	0.634	0.754
HOXB8 M05049_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_1	0.634	0.754
HOXB8 M05050_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_2	0.634	0.754
HOXC8 M04913_2.00	Homo sapiens	NYMATKRN	NYMATKRN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_1	0.634	0.754
HOXC8 M04914_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_2	0.634	0.754
Hoxd8 M00436_2.00	Mus musculus	NNWWYNNN	NNNRWWNN	PBM Berger et al.(2008) Hoxd8_2644	0.634	0.737
HOXD8 M03221_2.00	Homo sapiens	VHWAATKWDN	NHWMATTWDB	SELEX Jolma et al.(2013) HOXD8_1	0.634	0.737
HOXD8 M05310_2.00	Homo sapiens	BTAATKRY	RYMATTAV	SELEX Yin et al.(2017) HOXD8_eDBD_HT-SELEX	0.634	0.737
HOXD8 M05311_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_1	0.634	0.737
HOXD8 M05312_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_2	0.634	0.737
Q8I9J5_9BILA M02214_2.00	Spadella cephaloptera	NVTAWTWABN	NVTWAWTABN	PBM Weirauch et al.(2014) pTH6164	0.634	0.596
Hoxa6 M00494_2.00	Mus musculus	NWWATKRNN	NNYMATWWN	PBM Berger et al.(2008) Hoxa6_1040	0.630	0.737
HOXA6 M04974_2.00	Homo sapiens	NNTAATKRVN	NBYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_HT-SELEX	0.630	0.737
HOXA6 M04975_2.00	Homo sapiens	NNTAATKRBN	NVYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_1	0.630	0.737
HOXA6 M04976_2.00	Homo sapiens	NTAAYGRY	RYCRTTAN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_2	0.630	0.737
Hoxc6 M00392_2.00	Mus musculus	TTAATTAB	VTAATTAA	PBM Berger et al.(2008) Hoxc6_3954	0.630	0.719
abd-A M03770_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_1	0.630	0.719
abd-A M03771_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_2	0.630	0.719
abd-A M06475_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0206.1	0.630	0.719
abd-A M06210_2.00	Drosophila melanogaster	WTWATKDM	KHMATWAW	B1H Zhu et al.(2011) Abd-A_FlyReg_FBgn0000014	0.630	0.719
abd-A M09671_2.00	Drosophila melanogaster	HTAATKRH	DYMATTAD	Misc Kulakovskiy et al.(2009) abd-A	0.630	0.719
abd-A M10778_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDA_Q6	0.630	0.719
Hoxb6 M00381_2.00	Mus musculus	NNDHNNN	NNNDHNN	PBM Berger et al.(2008) Hoxb6_3428	0.626	0.719
Ubx M00558_2.00	Drosophila melanogaster	NWWAYDDNN	NNHHRTWWN	PBM Busser et al.(2012a) Ubx	0.626	0.719
Ubx M03804_2.00	Drosophila melanogaster	NTAATKRH	DYMATTAN	SELEX Nitta et al.(2015) Ubx_1	0.626	0.719
HOXB6 M04999_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXB6_eDBD_HT-SELEX	0.626	0.719
Ubx M06499_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Mathelier et al.(2014) MA0094.2	0.626	0.719
Ubx M06273_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Zhu et al.(2011) Ubx_Cell_FBgn0003944	0.626	0.719
Ubx M06274_2.00	Drosophila melanogaster	TAATKD	HMATTA	B1H Zhu et al.(2011) Ubx_FlyReg_FBgn0003944	0.626	0.719
Ubx M06275_2.00	Drosophila melanogaster	NTTWATKR	YMATWAAN	B1H Zhu et al.(2011) Ubx_SOLEXA_FBgn0003944	0.626	0.719
Ubx M09680_2.00	Drosophila melanogaster	TTAATKR	YMATTAA	Misc Kulakovskiy et al.(2009) Ubx	0.626	0.719
Ubx M10788_2.00	Drosophila melanogaster	NNVNNNNTAATKRNBHNND	HNNDVNYMATTANNNNBNN	Transfac Matys et al.(2006) I$UBX_01	0.626	0.719
HOXB6 M05000_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_1	0.626	0.719
HOXB6 M05001_2.00	Homo sapiens	NTWATKRB	VYMATWAN	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_2	0.626	0.719
Hoxa7 M00476_2.00	Mus musculus	NNWAYNDNN	NNHNRTWNN	PBM Berger et al.(2008) Hoxa7_2668	0.599	0.719
Hoxa7 M00477_2.00	Mus musculus	NYHHYNNNN	NNNNRDDRN	PBM Berger et al.(2008) Hoxa7_3750	0.599	0.719
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.599	0.719
HOXA7 M05069_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_HT-SELEX	0.599	0.719
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.599	0.719
Antp M06549_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0166.1	0.599	0.719
Antp M06374_2.00	Drosophila melanogaster	YTTAATKA	TMATTAAR	B1H Zhu et al.(2011) Antp_Cell_FBgn0000095	0.599	0.719
Antp M06375_2.00	Drosophila melanogaster	WTAATW	AATTAW	B1H Zhu et al.(2011) Antp_FlyReg_FBgn0000095	0.599	0.719
Antp M06376_2.00	Drosophila melanogaster	NHTAATKR	YMATTADN	B1H Zhu et al.(2011) Antp_SOLEXA_FBgn0000095	0.599	0.719
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.599	0.719
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.599	0.719
Antp M09682_2.00	Drosophila melanogaster	TYTTWATKA	TMATWAARA	Misc Kulakovskiy et al.(2009) Antp	0.599	0.719
Antp M10789_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ANTP_Q6_01	0.599	0.719
HOXA7 M10679_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA7_01	0.599	0.719
HOXA7 M05070_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_1	0.599	0.719
HOXA7 M05071_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_2	0.599	0.719
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.599	0.702
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.599	0.702
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.599	0.702
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.599	0.702
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.599	0.702
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.599	0.702
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.599	0.702
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.599	0.702
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.599	0.702
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.599	0.702
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.599	0.702
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.599	0.702
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.599	0.702
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.599	0.702
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.599	0.702
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.599	0.702
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.599	0.702
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.599	0.702
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

Experimental Constructs

Motif ID	Domain	From	To	Sequence
M00470_2.00	Homeodomain	17	73	RKRRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMUSP00000001706	Homeodomain	193	249	RKRRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK

Links
Other Homeodomain family TFs
Other *Mus musculus* TFs

1644 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSACAG00000010895	Anolis carolinensis	ENSACAG00000010895	I	0.858
ENSAMEG00000000678	Ailuropoda melanoleuca	ENSAMEG00000000678	I	0.858
ENSAMXG00000009380	Astyanax mexicanus	ENSAMXG00000009380	I	0.858
ENSAMXG00000024682	Astyanax mexicanus	ENSAMXG00000024682	I	0.858
ENSAPLG00000007152	Anas platyrhynchos	ENSAPLG00000007152	I	0.858
HOXC9	Bos taurus	ENSBTAG00000005606	I	0.858
HOXC9	Callithrix jacchus	ENSCJAG00000018819	I	0.858
ENSCSAG00000005453	Chlorocebus sabaeus	ENSCSAG00000005453	I	0.858
hoxc9a	Danio rerio	ENSDARG00000092809	I	0.858
HOXC9	Dasypus novemcinctus	ENSDNOG00000035825	I	0.858
ENSDORG00000006994	Dipodomys ordii	ENSDORG00000006994	I	0.858
HOXC9	Equus caballus	ENSECAG00000000726	I	0.858
HOXC9	Felis catus	ENSFCAG00000031037	I	0.858
HOXC9	Homo sapiens	ENSG00000180806	D	0.858
hoxc9a	Gasterosteus aculeatus	ENSGACG00000009396	I	0.858
ENSGALG00000026586	Gallus gallus	ENSGALG00000026586	I	0.858
HOXC9	Gorilla gorilla	ENSGGOG00000006282	I	0.858
ENSGMOG00000017882	Gadus morhua	ENSGMOG00000017882	I	0.858
ENSLACG00000016678	Latimeria chalumnae	ENSLACG00000016678	I	0.858
HOXC9	Loxodonta africana	ENSLAFG00000002366	I	0.858
ENSMEUG00000006605	Macropus eugenii	ENSMEUG00000006605	I	0.858
HOXC9	Microcebus murinus	ENSMICG00000011714	I	0.858
HOXC9	Myotis lucifugus	ENSMLUG00000000483	I	0.858
ENSMMUG00000000926	Macaca mulatta	ENSMMUG00000000926	I	0.858
ENSMPUG00000005862	Mustela putorius furo	ENSMPUG00000005862	I	0.858
ENSNLEG00000017678	Nomascus leucogenys	ENSNLEG00000017678	I	0.858
ENSOARG00000016319	Ovis aries	ENSOARG00000016319	I	0.858
HOXC9	Oryctolagus cuniculus	ENSOCUG00000001160	I	0.858
HOXC9	Otolemur garnettii	ENSOGAG00000003616	I	0.858
ENSONIG00000012238	Oreochromis niloticus	ENSONIG00000012238	I	0.858
hoxc8	Oryzias latipes	ENSORLG00000007935	I	0.858
ENSPANG00000014167	Papio anubis	ENSPANG00000014167	I	0.858
HOXC9	Procavia capensis	ENSPCAG00000010970	I	0.858
ENSPFOG00000022354	Poecilia formosa	ENSPFOG00000022354	I	0.858
ENSPPYG00000004592	Pongo abelii	ENSPPYG00000004592	I	0.858
ENSPSIG00000004824	Pelodiscus sinensis	ENSPSIG00000004824	I	0.858
HOXC9	Pan troglodytes	ENSPTRG00000005029	I	0.858
HOXC9	Pteropus vampyrus	ENSPVAG00000011039	I	0.858
Hoxc9	Rattus norvegicus	ENSRNOG00000016199	I	0.858
ENSSHAG00000006807	Sarcophilus harrisii	ENSSHAG00000006807	I	0.858
ENSSTOG00000012548	Ictidomys tridecemlineatus	ENSSTOG00000012548	I	0.858
HOXC9	Tupaia belangeri	ENSTBEG00000015691	I	0.858
HOXC9	Taeniopygia guttata	ENSTGUG00000014303	I	0.858
hoxc9a	Tetraodon nigroviridis	ENSTNIG00000001763	I	0.858
ENSTRUG00000003727	Takifugu rubripes	ENSTRUG00000003727	I	0.858
ENSXMAG00000001655	Xiphophorus maculatus	ENSXMAG00000001655	I	0.858
Aan_R014656	Calypte anna	Aan_R014656	I	0.858
Afo_R003396	Aptenodytes forsteri	Afo_R003396	I	0.858
Alligator_sinensis_CCG005139.1	Alligator sinensis	Alligator_sinensis_CCG005139.1	I	0.858
ENSP00000249499-D1	Bos grunniens	ENSP00000249499-D1	I	0.858
ENSP00000302836	Macaca fascicularis	ENSP00000302836	I	0.858
Myotis_brandtii_HOXC9_10022970	Myotis brandtii	Myotis_brandtii_HOXC9_10022970	I	0.858
Ogr02754	Ophisaurus gracilis	Ogr02754	I	0.858
Pvit_07419	Pogona vitticeps	Pvit_07419	I	0.858
hoxc9	Xenopus tropicalis	XB-GENE-482330	I	0.858
ENSGMOG00000003887	Gadus morhua	ENSGMOG00000003887	I	0.852
HOXB9	Anolis carolinensis	ENSACAG00000006412	I	0.846
ENSACAG00000007286	Anolis carolinensis	ENSACAG00000007286	I	0.846
ENSAMEG00000001843	Ailuropoda melanoleuca	ENSAMEG00000001843	I	0.846
ENSAMEG00000004990	Ailuropoda melanoleuca	ENSAMEG00000004990	I	0.846
ENSAMEG00000005885	Ailuropoda melanoleuca	ENSAMEG00000005885	I	0.846
ENSAMXG00000000614	Astyanax mexicanus	ENSAMXG00000000614	I	0.846
ENSAMXG00000015967	Astyanax mexicanus	ENSAMXG00000015967	I	0.846
ENSAPLG00000008679	Anas platyrhynchos	ENSAPLG00000008679	I	0.846
ENSAPLG00000011303	Anas platyrhynchos	ENSAPLG00000011303	I	0.846
ENSAPLG00000013604	Anas platyrhynchos	ENSAPLG00000013604	I	0.846
HOXD9	Bos taurus	ENSBTAG00000016033	I	0.846
ENSBTAG00000025009	Bos taurus	ENSBTAG00000025009	I	0.846
ENSCAFG00000002961	Canis familiaris	ENSCAFG00000002961	I	0.846
HOXB9	Canis familiaris	ENSCAFG00000016867	I	0.846
HOXB9	Callithrix jacchus	ENSCJAG00000007442	I	0.846
ENSCJAG00000008096	Callithrix jacchus	ENSCJAG00000008096	I	0.846
HOXD9	Callithrix jacchus	ENSCJAG00000008274	I	0.846
ENSCPOG00000011365	Cavia porcellus	ENSCPOG00000011365	I	0.846
HOXD9	Cavia porcellus	ENSCPOG00000015006	I	0.846
ENSCPOG00000024184	Cavia porcellus	ENSCPOG00000024184	I	0.846
ENSCSAG00000002521	Chlorocebus sabaeus	ENSCSAG00000002521	I	0.846
ENSCSAG00000014297	Chlorocebus sabaeus	ENSCSAG00000014297	I	0.846
ENSCSAG00000014441	Chlorocebus sabaeus	ENSCSAG00000014441	I	0.846
hoxb9a	Danio rerio	ENSDARG00000056023	I	0.846
hoxa9b	Danio rerio	ENSDARG00000056819	I	0.846
HOXB9	Dasypus novemcinctus	ENSDNOG00000024386	I	0.846
ENSDNOG00000043901	Dasypus novemcinctus	ENSDNOG00000043901	I	0.846
Hoxa9	Dipodomys ordii	ENSDORG00000006323	I	0.846
ENSDORG00000007908	Dipodomys ordii	ENSDORG00000007908	I	0.846
ENSECAG00000002772	Equus caballus	ENSECAG00000002772	I	0.846
ENSECAG00000008431	Equus caballus	ENSECAG00000008431	I	0.846
HOXD9	Equus caballus	ENSECAG00000021845	I	0.846
HOXD9	Erinaceus europaeus	ENSEEUG00000003473	I	0.846
ENSEEUG00000009872	Erinaceus europaeus	ENSEEUG00000009872	I	0.846
HOXD9	Echinops telfairi	ENSETEG00000011069	I	0.846
ENSFALG00000003149	Ficedula albicollis	ENSFALG00000003149	I	0.846
ENSFALG00000009435	Ficedula albicollis	ENSFALG00000009435	I	0.846
ENSFCAG00000007944	Felis catus	ENSFCAG00000007944	I	0.846
ENSFCAG00000013346	Felis catus	ENSFCAG00000013346	I	0.846
HOXB9	Felis catus	ENSFCAG00000029804	I	0.846
HOXA9	Homo sapiens	ENSG00000078399	D	0.846
HOXD9	Homo sapiens	ENSG00000128709	D	0.846
HOXB9	Homo sapiens	ENSG00000170689	D	0.846
ENSGALG00000019640	Gallus gallus	ENSGALG00000019640	I	0.846
ENSGALG00000023132	Gallus gallus	ENSGALG00000023132	I	0.846
HOXD9	Gallus gallus	ENSGALG00000027513	I	0.846
ENSGALG00000028983	Gallus gallus	ENSGALG00000028983	I	0.846
ENSGGOG00000002222	Gorilla gorilla	ENSGGOG00000002222	I	0.846
ENSLACG00000015129	Latimeria chalumnae	ENSLACG00000015129	I	0.846
ENSLACG00000017369	Latimeria chalumnae	ENSLACG00000017369	I	0.846
ENSLAFG00000008970	Loxodonta africana	ENSLAFG00000008970	I	0.846
HOXD9	Loxodonta africana	ENSLAFG00000011494	I	0.846
HOXB9	Loxodonta africana	ENSLAFG00000013600	I	0.846
ENSLOCG00000013453	Lepisosteus oculatus	ENSLOCG00000013453	I	0.846
ENSMEUG00000012377	Macropus eugenii	ENSMEUG00000012377	I	0.846
ENSMGAG00000017085	Meleagris gallopavo	ENSMGAG00000017085	I	0.846
ENSMICG00000000497	Microcebus murinus	ENSMICG00000000497	I	0.846
ENSMICG00000002192	Microcebus murinus	ENSMICG00000002192	I	0.846
ENSMICG00000007541	Microcebus murinus	ENSMICG00000007541	I	0.846
HOXB9	Myotis lucifugus	ENSMLUG00000011677	I	0.846
HOXA10	Macaca mulatta	ENSMMUG00000013459	I	0.846
ENSMMUG00000020869	Macaca mulatta	ENSMMUG00000020869	I	0.846
HOXD9	Macaca mulatta	ENSMMUG00000032599	I	0.846
HOXD9	Monodelphis domestica	ENSMODG00000009591	I	0.846
HOXB9	Monodelphis domestica	ENSMODG00000012329	I	0.846
ENSMPUG00000004809	Mustela putorius furo	ENSMPUG00000004809	I	0.846
ENSMPUG00000014053	Mustela putorius furo	ENSMPUG00000014053	I	0.846
ENSMPUG00000015330	Mustela putorius furo	ENSMPUG00000015330	I	0.846
Hoxb9	Mus musculus	ENSMUSG00000020875	D	0.846
Hoxa9	Mus musculus	ENSMUSG00000038227	D	0.846
Hoxd9	Mus musculus	ENSMUSG00000043342	D	0.846
ENSNLEG00000006011	Nomascus leucogenys	ENSNLEG00000006011	I	0.846
ENSNLEG00000014992	Nomascus leucogenys	ENSNLEG00000014992	I	0.846
HOXB9	Ornithorhynchus anatinus	ENSOANG00000005338	I	0.846
ENSOANG00000008615	Ornithorhynchus anatinus	ENSOANG00000008615	I	0.846
ENSOANG00000009170	Ornithorhynchus anatinus	ENSOANG00000009170	I	0.846
ENSOARG00000006872	Ovis aries	ENSOARG00000006872	I	0.846
ENSOARG00000009680	Ovis aries	ENSOARG00000009680	I	0.846
ENSOARG00000017504	Ovis aries	ENSOARG00000017504	I	0.846
ENSOCUG00000020585	Oryctolagus cuniculus	ENSOCUG00000020585	I	0.846
HOXD9	Oryctolagus cuniculus	ENSOCUG00000023956	I	0.846
HOXB9	Oryctolagus cuniculus	ENSOCUG00000027316	I	0.846
HOXB9	Otolemur garnettii	ENSOGAG00000008668	I	0.846
ENSOGAG00000015000	Otolemur garnettii	ENSOGAG00000015000	I	0.846
HOXD9	Otolemur garnettii	ENSOGAG00000015697	I	0.846
ENSONIG00000006179	Oreochromis niloticus	ENSONIG00000006179	I	0.846
ENSOPRG00000004049	Ochotona princeps	ENSOPRG00000004049	I	0.846
ENSOPRG00000010452	Ochotona princeps	ENSOPRG00000010452	I	0.846
hoxb9a	Oryzias latipes	ENSORLG00000017035	I	0.846
ENSPANG00000001061	Papio anubis	ENSPANG00000001061	I	0.846
ENSPANG00000022896	Papio anubis	ENSPANG00000022896	I	0.846
ENSPANG00000025913	Papio anubis	ENSPANG00000025913	I	0.846
HOXB9	Procavia capensis	ENSPCAG00000006263	I	0.846
ENSPFOG00000003870	Poecilia formosa	ENSPFOG00000003870	I	0.846
ENSPPYG00000008902	Pongo abelii	ENSPPYG00000008902	I	0.846
ENSPPYG00000012959	Pongo abelii	ENSPPYG00000012959	I	0.846
ENSPPYG00000017700	Pongo abelii	ENSPPYG00000017700	I	0.846
ENSPSIG00000002761	Pelodiscus sinensis	ENSPSIG00000002761	I	0.846
ENSPSIG00000007113	Pelodiscus sinensis	ENSPSIG00000007113	I	0.846
HOXB9	Pan troglodytes	ENSPTRG00000009358	I	0.846
HOXA9	Pan troglodytes	ENSPTRG00000019018	I	0.846
HOXD9	Pan troglodytes	ENSPTRG00000029132	I	0.846
ENSPVAG00000002497	Pteropus vampyrus	ENSPVAG00000002497	I	0.846
Hoxd9	Rattus norvegicus	ENSRNOG00000001580	I	0.846
Hoxb9	Rattus norvegicus	ENSRNOG00000007573	I	0.846
LOC103692128	Rattus norvegicus	ENSRNOG00000047484	I	0.846
Hoxa9	Rattus norvegicus	ENSRNOG00000048146	I	0.846
LOC103689925	Rattus norvegicus	ENSRNOG00000061871	I	0.846
ENSSARG00000005576	Sorex araneus	ENSSARG00000005576	I	0.846
ENSSHAG00000012684	Sarcophilus harrisii	ENSSHAG00000012684	I	0.846
ENSSHAG00000016017	Sarcophilus harrisii	ENSSHAG00000016017	I	0.846
HOXD9	Sus scrofa	ENSSSCG00000015982	I	0.846
ENSSSCG00000016700	Sus scrofa	ENSSSCG00000016700	I	0.846
ENSSSCG00000028997	Sus scrofa	ENSSSCG00000028997	I	0.846
ENSSTOG00000009741	Ictidomys tridecemlineatus	ENSSTOG00000009741	I	0.846
ENSSTOG00000026761	Ictidomys tridecemlineatus	ENSSTOG00000026761	I	0.846
ENSSTOG00000028613	Ictidomys tridecemlineatus	ENSSTOG00000028613	I	0.846
HOXD9	Tupaia belangeri	ENSTBEG00000010979	I	0.846
ENSTBEG00000011012	Tupaia belangeri	ENSTBEG00000011012	I	0.846
ENSTGUG00000002921	Taeniopygia guttata	ENSTGUG00000002921	I	0.846
ENSTGUG00000003448	Taeniopygia guttata	ENSTGUG00000003448	I	0.846
hoxb9a	Tetraodon nigroviridis	ENSTNIG00000010822	I	0.846
ENSTRUG00000009487	Takifugu rubripes	ENSTRUG00000009487	I	0.846
HOXB9	Tursiops truncatus	ENSTTRG00000012262	I	0.846
HOXD9	Tursiops truncatus	ENSTTRG00000013773	I	0.846
HOXD9	Vicugna pacos	ENSVPAG00000010198	I	0.846
ENSXMAG00000002838	Xiphophorus maculatus	ENSXMAG00000002838	I	0.846
Aan_R001088	Calypte anna	Aan_R001088	I	0.846
Aan_R004559	Calypte anna	Aan_R004559	I	0.846
Aan_R012456	Calypte anna	Aan_R012456	I	0.846
Afo_R003419	Aptenodytes forsteri	Afo_R003419	I	0.846
Afo_R006607	Aptenodytes forsteri	Afo_R006607	I	0.846
Afo_R006932	Aptenodytes forsteri	Afo_R006932	I	0.846
Alligator_sinensis_CCG010659.1	Alligator sinensis	Alligator_sinensis_CCG010659.1	I	0.846
Alligator_sinensis_CCG014475.1	Alligator sinensis	Alligator_sinensis_CCG014475.1	I	0.846
Brh_R010177	Buceros rhinoceros	Brh_R010177	I	0.846
Brh_R010431	Buceros rhinoceros	Brh_R010431	I	0.846
Cmyd_10010792	Chelonia mydas	Cmyd_10010792	I	0.846
Cmyd_10015814	Chelonia mydas	Cmyd_10015814	I	0.846
Cmyd_10020955	Chelonia mydas	Cmyd_10020955	I	0.846
ENSBTAP00000021336-D3	Bos grunniens	ENSBTAP00000021336-D3	I	0.846
ENSP00000249499	Macaca fascicularis	ENSP00000249499	I	0.846
ENSP00000309439	Macaca fascicularis	ENSP00000309439	I	0.846
ENSP00000343619	Macaca fascicularis	ENSP00000343619	I	0.846
Gfo_R001381	Geospiza fortis	Gfo_R001381	I	0.846
Gfo_R015839	Geospiza fortis	Gfo_R015839	I	0.846
Myotis_brandtii_HOXA9_10034032	Myotis brandtii	Myotis_brandtii_HOXA9_10034032	I	0.846
Myotis_brandtii_HOXB9_10017023	Myotis brandtii	Myotis_brandtii_HOXB9_10017023	I	0.846
Myotis_brandtii_Hoxd9_10034999	Myotis brandtii	Myotis_brandtii_Hoxd9_10034999	I	0.846
Ogr11833	Ophisaurus gracilis	Ogr11833	I	0.846
Ogr12573	Ophisaurus gracilis	Ogr12573	I	0.846
Pvit_02707	Pogona vitticeps	Pvit_02707	I	0.846
Pvit_11710	Pogona vitticeps	Pvit_11710	I	0.846
Pvit_18295	Pogona vitticeps	Pvit_18295	I	0.846
Tal_R005272	Tyto alba	Tal_R005272	I	0.846
hoxd9.S	Xenopus laevis	XB-GENE-485796	I	0.846
hoxc9.S	Xenopus laevis	XB-GENE-6466551	I	0.846
hoxa10.L	Xenopus laevis	XB-GENE-6486002	I	0.846
hoxa9.S	Xenopus laevis	XB-GENE-864813	I	0.846
hoxb9	Xenopus tropicalis	XB-GENE-963094	I	0.846
XP_002935720	Xenopus tropicalis	XP_002935720	I	0.846
HOXD9	Gorilla gorilla	ENSGGOG00000001343	I	0.845
ENSLACG00000009170	Latimeria chalumnae	ENSLACG00000009170	I	0.845
ENSAMXG00000006985	Astyanax mexicanus	ENSAMXG00000006985	I	0.842
hoxd9a	Danio rerio	ENSDARG00000059274	I	0.842
hoxa9b	Gasterosteus aculeatus	ENSGACG00000011902	I	0.842
ENSLOCG00000007106	Lepisosteus oculatus	ENSLOCG00000007106	I	0.842
ENSONIG00000001343	Oreochromis niloticus	ENSONIG00000001343	I	0.842
ENSORLG00000001349	Oryzias latipes	ENSORLG00000001349	I	0.842
hoxa9b	Tetraodon nigroviridis	ENSTNIG00000001779	I	0.842
hoxa9b	Takifugu rubripes	ENSTRUG00000009562	I	0.842
ENSXMAG00000006762	Xiphophorus maculatus	ENSXMAG00000006762	I	0.842
hoxd9a	Gasterosteus aculeatus	ENSGACG00000004556	I	0.840
ENSGMOG00000004271	Gadus morhua	ENSGMOG00000004271	I	0.840
ENSONIG00000008613	Oreochromis niloticus	ENSONIG00000008613	I	0.840
hoxd9	Oryzias latipes	ENSORLG00000017544	I	0.840
ENSPFOG00000024320	Poecilia formosa	ENSPFOG00000024320	I	0.840
hoxd9a	Tetraodon nigroviridis	ENSTNIG00000016957	I	0.840
ENSTRUG00000017521	Takifugu rubripes	ENSTRUG00000017521	I	0.840
ENSXMAG00000000432	Xiphophorus maculatus	ENSXMAG00000000432	I	0.840
SPU_002633	Strongylocentrotus purpuratus	SPU_002633	I	0.840
ENSDORG00000009438	Dipodomys ordii	ENSDORG00000009438	I	0.836
ENSPMAG00000010033	Petromyzon marinus	ENSPMAG00000010033	I	0.830
ENSPMAG00000010215	Petromyzon marinus	ENSPMAG00000010215	I	0.830
e_gw.260.52.1	Branchiostoma floridae	e_gw.260.52.1	I	0.826
e_gw.402.47.1	Branchiostoma floridae	e_gw.402.47.1	I	0.826
Sakowv30000850m.g	Saccoglossus kowalevskii	Sakowv30000850m.g	I	0.826
hoxa9b	Gasterosteus aculeatus	ENSGACG00000008310	I	0.811
ENSGMOG00000012111	Gadus morhua	ENSGMOG00000012111	I	0.802
hoxa9b	Oryzias latipes	ENSORLG00000007620	I	0.802
ENSPFOG00000003793	Poecilia formosa	ENSPFOG00000003793	I	0.802
ENSPMAG00000010422	Petromyzon marinus	ENSPMAG00000010422	I	0.802
ENSXMAG00000013906	Xiphophorus maculatus	ENSXMAG00000013906	I	0.802
hoxa9b	Tetraodon nigroviridis	ENSTNIG00000001769	I	0.800
ENSTRUG00000015327	Takifugu rubripes	ENSTRUG00000015327	I	0.800
HOXC10	Anolis carolinensis	ENSACAG00000010855	I	0.798
HOXD10	Anolis carolinensis	ENSACAG00000017910	I	0.798
ENSAMEG00000000673	Ailuropoda melanoleuca	ENSAMEG00000000673	I	0.798
ENSAMEG00000001849	Ailuropoda melanoleuca	ENSAMEG00000001849	I	0.798
ENSAMXG00000006948	Astyanax mexicanus	ENSAMXG00000006948	I	0.798
ENSAPLG00000007155	Anas platyrhynchos	ENSAPLG00000007155	I	0.798
ENSAPLG00000008956	Anas platyrhynchos	ENSAPLG00000008956	I	0.798
HOXC10	Bos taurus	ENSBTAG00000003278	I	0.798
HOXD10	Bos taurus	ENSBTAG00000016030	I	0.798
HOXC10	Canis familiaris	ENSCAFG00000006636	I	0.798
HOXD10	Canis familiaris	ENSCAFG00000013447	I	0.798
HOXD10	Callithrix jacchus	ENSCJAG00000008269	I	0.798
ENSCJAG00000018811	Callithrix jacchus	ENSCJAG00000018811	I	0.798
HOXC10	Cavia porcellus	ENSCPOG00000009442	I	0.798
HOXD10	Cavia porcellus	ENSCPOG00000011368	I	0.798
ENSCSAG00000005455	Chlorocebus sabaeus	ENSCSAG00000005455	I	0.798
ENSCSAG00000014448	Chlorocebus sabaeus	ENSCSAG00000014448	I	0.798
hoxd10a	Danio rerio	ENSDARG00000057859	I	0.798
hoxc10a	Danio rerio	ENSDARG00000070348	I	0.798
HOXC10	Dasypus novemcinctus	ENSDNOG00000017505	I	0.798
HOXD10	Dasypus novemcinctus	ENSDNOG00000034389	I	0.798
Hoxc10	Dipodomys ordii	ENSDORG00000006992	I	0.798
HOXD10	Equus caballus	ENSECAG00000020599	I	0.798
HOXC10	Equus caballus	ENSECAG00000024985	I	0.798
HOXD10	Erinaceus europaeus	ENSEEUG00000003440	I	0.798
HOXD10	Echinops telfairi	ENSETEG00000011067	I	0.798
ENSFALG00000003142	Ficedula albicollis	ENSFALG00000003142	I	0.798
HOXD10	Felis catus	ENSFCAG00000006264	I	0.798
HOXC10	Felis catus	ENSFCAG00000011202	I	0.798
HOXD10	Homo sapiens	ENSG00000128710	D	0.798
HOXC10	Homo sapiens	ENSG00000180818	D	0.798
hoxd10a	Gasterosteus aculeatus	ENSGACG00000004564	I	0.798
hoxc10a	Gasterosteus aculeatus	ENSGACG00000009394	I	0.798
HOXD10	Gallus gallus	ENSGALG00000009270	I	0.798
ENSGALG00000018783	Gallus gallus	ENSGALG00000018783	I	0.798
HOXC10	Gorilla gorilla	ENSGGOG00000001105	I	0.798
HOXD10	Gorilla gorilla	ENSGGOG00000001341	I	0.798
ENSGMOG00000004293	Gadus morhua	ENSGMOG00000004293	I	0.798
ENSGMOG00000017875	Gadus morhua	ENSGMOG00000017875	I	0.798
ENSLACG00000009430	Latimeria chalumnae	ENSLACG00000009430	I	0.798
ENSLACG00000016699	Latimeria chalumnae	ENSLACG00000016699	I	0.798
HOXD10	Loxodonta africana	ENSLAFG00000013262	I	0.798
HOXC10	Loxodonta africana	ENSLAFG00000018137	I	0.798
ENSLOCG00000006316	Lepisosteus oculatus	ENSLOCG00000006316	I	0.798
ENSLOCG00000007118	Lepisosteus oculatus	ENSLOCG00000007118	I	0.798
ENSLOCG00000013455	Lepisosteus oculatus	ENSLOCG00000013455	I	0.798
ENSMGAG00000016851	Meleagris gallopavo	ENSMGAG00000016851	I	0.798
ENSMICG00000002191	Microcebus murinus	ENSMICG00000002191	I	0.798
ENSMICG00000011712	Microcebus murinus	ENSMICG00000011712	I	0.798
HOXC10	Myotis lucifugus	ENSMLUG00000000482	I	0.798
HOXD10	Myotis lucifugus	ENSMLUG00000007048	I	0.798
HOXC10	Macaca mulatta	ENSMMUG00000000925	I	0.798
ENSMMUG00000023503	Macaca mulatta	ENSMMUG00000023503	I	0.798
HOXD10	Monodelphis domestica	ENSMODG00000009577	I	0.798
ENSMPUG00000005868	Mustela putorius furo	ENSMPUG00000005868	I	0.798
ENSMPUG00000014049	Mustela putorius furo	ENSMPUG00000014049	I	0.798
Hoxc10	Mus musculus	ENSMUSG00000022484	D	0.798
Hoxd10	Mus musculus	ENSMUSG00000050368	D	0.798
ENSNLEG00000006010	Nomascus leucogenys	ENSNLEG00000006010	I	0.798
ENSNLEG00000017679	Nomascus leucogenys	ENSNLEG00000017679	I	0.798
HOXC10	Ornithorhynchus anatinus	ENSOANG00000013041	I	0.798
ENSOARG00000016331	Ovis aries	ENSOARG00000016331	I	0.798
ENSOARG00000017514	Ovis aries	ENSOARG00000017514	I	0.798
HOXD10	Oryctolagus cuniculus	ENSOCUG00000008964	I	0.798
HOXC10	Oryctolagus cuniculus	ENSOCUG00000015176	I	0.798
HOXC10	Otolemur garnettii	ENSOGAG00000003615	I	0.798
HOXD10	Otolemur garnettii	ENSOGAG00000015694	I	0.798
ENSONIG00000008614	Oreochromis niloticus	ENSONIG00000008614	I	0.798
ENSONIG00000012237	Oreochromis niloticus	ENSONIG00000012237	I	0.798
HOXD10	Ochotona princeps	ENSOPRG00000004038	I	0.798
hoxc10a	Oryzias latipes	ENSORLG00000007913	I	0.798
hoxd10a	Oryzias latipes	ENSORLG00000017540	I	0.798
ENSPANG00000004242	Papio anubis	ENSPANG00000004242	I	0.798
HOXC10	Procavia capensis	ENSPCAG00000010955	I	0.798
HOXD10	Procavia capensis	ENSPCAG00000015648	I	0.798
ENSPFOG00000002043	Poecilia formosa	ENSPFOG00000002043	I	0.798
ENSPFOG00000014005	Poecilia formosa	ENSPFOG00000014005	I	0.798
ENSPMAG00000010194	Petromyzon marinus	ENSPMAG00000010194	I	0.798
ENSPPYG00000004591	Pongo abelii	ENSPPYG00000004591	I	0.798
ENSPPYG00000012958	Pongo abelii	ENSPPYG00000012958	I	0.798
ENSPSIG00000004830	Pelodiscus sinensis	ENSPSIG00000004830	I	0.798
HOXC10	Pan troglodytes	ENSPTRG00000005028	I	0.798
HOXD10	Pan troglodytes	ENSPTRG00000012667	I	0.798
HOXD10	Pteropus vampyrus	ENSPVAG00000017418	I	0.798
Hoxd10	Rattus norvegicus	ENSRNOG00000001581	I	0.798
Hoxc10	Rattus norvegicus	ENSRNOG00000016149	I	0.798
HOXD10	Sorex araneus	ENSSARG00000007696	I	0.798
ENSSHAG00000006601	Sarcophilus harrisii	ENSSHAG00000006601	I	0.798
ENSSHAG00000016004	Sarcophilus harrisii	ENSSHAG00000016004	I	0.798
HOXD10	Sus scrofa	ENSSSCG00000015981	I	0.798
ENSSTOG00000003935	Ictidomys tridecemlineatus	ENSSTOG00000003935	I	0.798
ENSSTOG00000012545	Ictidomys tridecemlineatus	ENSSTOG00000012545	I	0.798
HOXD10	Tupaia belangeri	ENSTBEG00000010925	I	0.798
HOXD10	Taeniopygia guttata	ENSTGUG00000008948	I	0.798
hoxd10a	Tetraodon nigroviridis	ENSTNIG00000001775	I	0.798
hoxc10a	Tetraodon nigroviridis	ENSTNIG00000015049	I	0.798
hoxc10a	Tetraodon nigroviridis	ENSTNIG00000017167	I	0.798
hoxc10a	Tetraodon nigroviridis	ENSTNIG00000017168	I	0.798
ENSTRUG00000017526	Takifugu rubripes	ENSTRUG00000017526	I	0.798
HOXC10	Tursiops truncatus	ENSTTRG00000004540	I	0.798
Aan_R004560	Calypte anna	Aan_R004560	I	0.798
Aan_R014657	Calypte anna	Aan_R014657	I	0.798
Afo_R003395	Aptenodytes forsteri	Afo_R003395	I	0.798
Afo_R006931	Aptenodytes forsteri	Afo_R006931	I	0.798
Alligator_sinensis_CCG005374.1	Alligator sinensis	Alligator_sinensis_CCG005374.1	I	0.798
Alligator_sinensis_CCG010658.1	Alligator sinensis	Alligator_sinensis_CCG010658.1	I	0.798
Brh_R008822	Buceros rhinoceros	Brh_R008822	I	0.798
Cmyd_10006887	Chelonia mydas	Cmyd_10006887	I	0.798
Cmyd_10010793	Chelonia mydas	Cmyd_10010793	I	0.798
ENSP00000249501-D1	Bos grunniens	ENSP00000249501-D1	I	0.798
ENSP00000249501	Macaca fascicularis	ENSP00000249501	I	0.798
ENSP00000307321-D1	Bos grunniens	ENSP00000307321-D1	I	0.798
ENSP00000307321	Macaca fascicularis	ENSP00000307321	I	0.798
Gfo_R001380	Geospiza fortis	Gfo_R001380	I	0.798
Myotis_brandtii_HOXC10_10022972	Myotis brandtii	Myotis_brandtii_HOXC10_10022972	I	0.798
Myotis_brandtii_HOXD10_10034998	Myotis brandtii	Myotis_brandtii_HOXD10_10034998	I	0.798
Pvit_07420	Pogona vitticeps	Pvit_07420	I	0.798
Pvit_11711	Pogona vitticeps	Pvit_11711	I	0.798
hoxd10	Xenopus tropicalis	XB-GENE-485204	I	0.798
hoxd10.L	Xenopus laevis	XB-GENE-485208	I	0.798
hoxc10.L	Xenopus laevis	XB-GENE-486919	I	0.798
XP_002936694	Xenopus tropicalis	XP_002936694	I	0.798
ENSAMXG00000005199	Astyanax mexicanus	ENSAMXG00000005199	I	0.797
hoxa9a	Danio rerio	ENSDARG00000105013	I	0.797
ENSGACG00000007123	Gasterosteus aculeatus	ENSGACG00000007123	I	0.797
ENSGMOG00000013861	Gadus morhua	ENSGMOG00000013861	I	0.797
ENSONIG00000002965	Oreochromis niloticus	ENSONIG00000002965	I	0.797
ENSONIG00000004597	Oreochromis niloticus	ENSONIG00000004597	I	0.797
hoxa9	Oryzias latipes	ENSORLG00000005025	I	0.797
ENSPFOG00000002585	Poecilia formosa	ENSPFOG00000002585	I	0.797
ENSTNIG00000001582	Tetraodon nigroviridis	ENSTNIG00000001582	I	0.797
ENSTRUG00000015974	Takifugu rubripes	ENSTRUG00000015974	I	0.797
ENSXMAG00000001057	Xiphophorus maculatus	ENSXMAG00000001057	I	0.797
HOXA10	Anolis carolinensis	ENSACAG00000010315	I	0.796
ENSAMEG00000005883	Ailuropoda melanoleuca	ENSAMEG00000005883	I	0.796
ENSAMXG00000000616	Astyanax mexicanus	ENSAMXG00000000616	I	0.796
ENSAMXG00000005178	Astyanax mexicanus	ENSAMXG00000005178	I	0.796
ENSAPLG00000011292	Anas platyrhynchos	ENSAPLG00000011292	I	0.796
HOXA10	Bos taurus	ENSBTAG00000040082	I	0.796
HOXA10	Canis familiaris	ENSCAFG00000002963	I	0.796
HOXA10	Callithrix jacchus	ENSCJAG00000008173	I	0.796
ENSCSAG00000014302	Chlorocebus sabaeus	ENSCSAG00000014302	I	0.796
hoxa10b	Danio rerio	ENSDARG00000031337	I	0.796
ENSDNOG00000039533	Dasypus novemcinctus	ENSDNOG00000039533	I	0.796
ENSDORG00000006324	Dipodomys ordii	ENSDORG00000006324	I	0.796
HOXA10	Equus caballus	ENSECAG00000012577	I	0.796
HOXA10	Erinaceus europaeus	ENSEEUG00000009849	I	0.796
ENSFALG00000009427	Ficedula albicollis	ENSFALG00000009427	I	0.796
ENSFALG00000012193	Ficedula albicollis	ENSFALG00000012193	I	0.796
HOXA10	Felis catus	ENSFCAG00000025359	I	0.796
HOXA10	Homo sapiens	ENSG00000253293	D	0.796
ENSGACG00000007128	Gasterosteus aculeatus	ENSGACG00000007128	I	0.796
hoxa10b	Gasterosteus aculeatus	ENSGACG00000008303	I	0.796
HOXA10	Gallus gallus	ENSGALG00000026631	I	0.796
ENSGALG00000027636	Gallus gallus	ENSGALG00000027636	I	0.796
HOXA10	Gorilla gorilla	ENSGGOG00000002225	I	0.796
ENSGMOG00000001217	Gadus morhua	ENSGMOG00000001217	I	0.796
ENSLACG00000017380	Latimeria chalumnae	ENSLACG00000017380	I	0.796
HOXA10	Loxodonta africana	ENSLAFG00000030920	I	0.796
ENSLOCG00000011830	Lepisosteus oculatus	ENSLOCG00000011830	I	0.796
ENSMEUG00000001294	Macropus eugenii	ENSMEUG00000001294	I	0.796
ENSMGAG00000016085	Meleagris gallopavo	ENSMGAG00000016085	I	0.796
ENSMICG00000000499	Microcebus murinus	ENSMICG00000000499	I	0.796
ENSMLUG00000027272	Myotis lucifugus	ENSMLUG00000027272	I	0.796
ENSMMUG00000013461	Macaca mulatta	ENSMMUG00000013461	I	0.796
HOXA10	Monodelphis domestica	ENSMODG00000000463	I	0.796
ENSMPUG00000004815	Mustela putorius furo	ENSMPUG00000004815	I	0.796
Hoxa10	Mus musculus	ENSMUSG00000000938	D	0.796
ENSNLEG00000018316	Nomascus leucogenys	ENSNLEG00000018316	I	0.796
HOXA10	Ornithorhynchus anatinus	ENSOANG00000009171	I	0.796
ENSOARG00000009675	Ovis aries	ENSOARG00000009675	I	0.796
HOXA10	Otolemur garnettii	ENSOGAG00000012385	I	0.796
ENSONIG00000002964	Oreochromis niloticus	ENSONIG00000002964	I	0.796
ENSONIG00000004598	Oreochromis niloticus	ENSONIG00000004598	I	0.796
HOXA10	Ochotona princeps	ENSOPRG00000010473	I	0.796
ENSORLG00000005034	Oryzias latipes	ENSORLG00000005034	I	0.796
hoxa10b	Oryzias latipes	ENSORLG00000007617	I	0.796
ENSPANG00000021024	Papio anubis	ENSPANG00000021024	I	0.796
HOXA10	Procavia capensis	ENSPCAG00000016469	I	0.796
ENSPFOG00000002523	Poecilia formosa	ENSPFOG00000002523	I	0.796
ENSPPYG00000017699	Pongo abelii	ENSPPYG00000017699	I	0.796
HOXA10	Pan troglodytes	ENSPTRG00000019019	I	0.796
HOXA10	Pteropus vampyrus	ENSPVAG00000002499	I	0.796
LOC100911668	Rattus norvegicus	ENSRNOG00000027246	I	0.796
LOC100912608	Rattus norvegicus	ENSRNOG00000050252	I	0.796
Hoxa10	Rattus norvegicus	ENSRNOG00000057650	I	0.796
ENSSSCG00000016699	Sus scrofa	ENSSSCG00000016699	I	0.796
HOXA10	Sus scrofa	ENSSSCG00000021204	I	0.796
ENSSTOG00000021212	Ictidomys tridecemlineatus	ENSSTOG00000021212	I	0.796
HOXA10	Tupaia belangeri	ENSTBEG00000011018	I	0.796
HOXA10	Taeniopygia guttata	ENSTGUG00000002924	I	0.796
ENSTGUG00000014511	Taeniopygia guttata	ENSTGUG00000014511	I	0.796
ENSTNIG00000001766	Tetraodon nigroviridis	ENSTNIG00000001766	I	0.796
hoxa10b	Tetraodon nigroviridis	ENSTNIG00000001780	I	0.796
ENSTRUG00000015981	Takifugu rubripes	ENSTRUG00000015981	I	0.796
HOXA10	Tursiops truncatus	ENSTTRG00000003476	I	0.796
ENSXMAG00000013905	Xiphophorus maculatus	ENSXMAG00000013905	I	0.796
Aan_R001089	Calypte anna	Aan_R001089	I	0.796
Afo_R003418	Aptenodytes forsteri	Afo_R003418	I	0.796
Alligator_sinensis_CCG010189.1	Alligator sinensis	Alligator_sinensis_CCG010189.1	I	0.796
Brh_R009206	Buceros rhinoceros	Brh_R009206	I	0.796
Cmyd_10020959	Chelonia mydas	Cmyd_10020959	I	0.796
ENSBTAP00000051506-D7	Bos grunniens	ENSBTAP00000051506-D7	I	0.796
ENSMMUP00000017694	Macaca fascicularis	ENSMMUP00000017694	I	0.796
Gfo_R015838	Geospiza fortis	Gfo_R015838	I	0.796
Myotis_brandtii_HOXA10_10034030	Myotis brandtii	Myotis_brandtii_HOXA10_10034030	I	0.796
Ogr11832	Ophisaurus gracilis	Ogr11832	I	0.796
Pvit_02706	Pogona vitticeps	Pvit_02706	I	0.796
HOXD10	Vicugna pacos	ENSVPAG00000010197	I	0.794
e_gw.260.82.1	Branchiostoma floridae	e_gw.260.82.1	I	0.793
ENSGMOG00000012109	Gadus morhua	ENSGMOG00000012109	I	0.791
ENSPMAG00000009919	Petromyzon marinus	ENSPMAG00000009919	I	0.787
ENSSSCG00000027615	Sus scrofa	ENSSSCG00000027615	I	0.775
ENSTGUG00000008955	Taeniopygia guttata	ENSTGUG00000008955	I	0.773
ENSSSCG00000017536	Sus scrofa	ENSSSCG00000017536	I	0.770
HOXA10	Oryctolagus cuniculus	ENSOCUG00000029439	I	0.763
hoxb10a	Danio rerio	ENSDARG00000011579	I	0.753
hoxd11a	Oryzias latipes	ENSORLG00000017538	I	0.751
e_gw.260.79.1	Branchiostoma floridae	e_gw.260.79.1	I	0.746
gw.260.58.1	Branchiostoma floridae	gw.260.58.1	I	0.744
gw.260.71.1	Branchiostoma floridae	gw.260.71.1	I	0.744
HOXD11	Anolis carolinensis	ENSACAG00000007282	I	0.742
HOXA11	Anolis carolinensis	ENSACAG00000010304	I	0.742
HOXC11	Anolis carolinensis	ENSACAG00000010848	I	0.742
ENSAMEG00000000668	Ailuropoda melanoleuca	ENSAMEG00000000668	I	0.742
ENSAMEG00000001856	Ailuropoda melanoleuca	ENSAMEG00000001856	I	0.742
ENSAMEG00000005879	Ailuropoda melanoleuca	ENSAMEG00000005879	I	0.742
ENSAMXG00000000618	Astyanax mexicanus	ENSAMXG00000000618	I	0.742
ENSAMXG00000005162	Astyanax mexicanus	ENSAMXG00000005162	I	0.742
ENSAMXG00000006918	Astyanax mexicanus	ENSAMXG00000006918	I	0.742
ENSAMXG00000024683	Astyanax mexicanus	ENSAMXG00000024683	I	0.742
ENSAPLG00000007301	Anas platyrhynchos	ENSAPLG00000007301	I	0.742
ENSAPLG00000008856	Anas platyrhynchos	ENSAPLG00000008856	I	0.742
ENSAPLG00000011282	Anas platyrhynchos	ENSAPLG00000011282	I	0.742
HOXC11	Bos taurus	ENSBTAG00000006879	I	0.742
HOXA11	Bos taurus	ENSBTAG00000014738	I	0.742
HOXD11	Bos taurus	ENSBTAG00000033330	I	0.742
HOXA11	Canis familiaris	ENSCAFG00000002966	I	0.742
HOXD11	Canis familiaris	ENSCAFG00000013436	I	0.742
HOXC11	Canis familiaris	ENSCAFG00000025599	I	0.742
HOXA11	Choloepus hoffmanni	ENSCHOG00000007426	I	0.742
HOXA11	Callithrix jacchus	ENSCJAG00000008187	I	0.742
HOXC11	Callithrix jacchus	ENSCJAG00000018808	I	0.742
ENSCPOG00000009441	Cavia porcellus	ENSCPOG00000009441	I	0.742
ENSCPOG00000019766	Cavia porcellus	ENSCPOG00000019766	I	0.742
ENSCSAG00000005457	Chlorocebus sabaeus	ENSCSAG00000005457	I	0.742
ENSCSAG00000014310	Chlorocebus sabaeus	ENSCSAG00000014310	I	0.742
ENSCSAG00000014457	Chlorocebus sabaeus	ENSCSAG00000014457	I	0.742
hoxa11b	Danio rerio	ENSDARG00000007009	I	0.742
hoxc11a	Danio rerio	ENSDARG00000070351	I	0.742
hoxc11b	Danio rerio	ENSDARG00000102631	I	0.742
hoxa11a	Danio rerio	ENSDARG00000104162	I	0.742
HOXD11	Dasypus novemcinctus	ENSDNOG00000044260	I	0.742
Hoxa11	Dipodomys ordii	ENSDORG00000006326	I	0.742
Hoxc11	Dipodomys ordii	ENSDORG00000006990	I	0.742
ENSECAG00000003045	Equus caballus	ENSECAG00000003045	I	0.742
HOXA11	Equus caballus	ENSECAG00000013229	I	0.742
HOXC11	Equus caballus	ENSECAG00000024900	I	0.742
ENSETEG00000011066	Echinops telfairi	ENSETEG00000011066	I	0.742
HOXC11	Echinops telfairi	ENSETEG00000016549	I	0.742
ENSFALG00000003132	Ficedula albicollis	ENSFALG00000003132	I	0.742
ENSFALG00000009418	Ficedula albicollis	ENSFALG00000009418	I	0.742
ENSFALG00000014318	Ficedula albicollis	ENSFALG00000014318	I	0.742
HOXA11	Felis catus	ENSFCAG00000007945	I	0.742
HOXC11	Felis catus	ENSFCAG00000023232	I	0.742
HOXD11	Felis catus	ENSFCAG00000030594	I	0.742
HOXA11	Homo sapiens	ENSG00000005073	D	0.742
HOXC11	Homo sapiens	ENSG00000123388	D	0.742
HOXD11	Homo sapiens	ENSG00000128713	D	0.742
hoxd11a	Gasterosteus aculeatus	ENSGACG00000004569	I	0.742
hoxa11a	Gasterosteus aculeatus	ENSGACG00000007132	I	0.742
hoxa11b	Gasterosteus aculeatus	ENSGACG00000008297	I	0.742
hoxc11a	Gasterosteus aculeatus	ENSGACG00000009392	I	0.742
ENSGALG00000009273	Gallus gallus	ENSGALG00000009273	I	0.742
ENSGALG00000023130	Gallus gallus	ENSGALG00000023130	I	0.742
ENSGALG00000026100	Gallus gallus	ENSGALG00000026100	I	0.742
HOXA11	Gorilla gorilla	ENSGGOG00000002226	I	0.742
ENSGMOG00000004301	Gadus morhua	ENSGMOG00000004301	I	0.742
ENSGMOG00000013882	Gadus morhua	ENSGMOG00000013882	I	0.742
ENSGMOG00000017869	Gadus morhua	ENSGMOG00000017869	I	0.742
ENSLACG00000009551	Latimeria chalumnae	ENSLACG00000009551	I	0.742
ENSLACG00000016719	Latimeria chalumnae	ENSLACG00000016719	I	0.742
HOXA11	Loxodonta africana	ENSLAFG00000005482	I	0.742
HOXC11	Loxodonta africana	ENSLAFG00000018133	I	0.742
ENSLOCG00000007133	Lepisosteus oculatus	ENSLOCG00000007133	I	0.742
ENSLOCG00000011836	Lepisosteus oculatus	ENSLOCG00000011836	I	0.742
ENSMEUG00000001311	Macropus eugenii	ENSMEUG00000001311	I	0.742
ENSMEUG00000009443	Macropus eugenii	ENSMEUG00000009443	I	0.742
HOXD11	Meleagris gallopavo	ENSMGAG00000009660	I	0.742
ENSMICG00000000500	Microcebus murinus	ENSMICG00000000500	I	0.742
ENSMICG00000002175	Microcebus murinus	ENSMICG00000002175	I	0.742
HOXC11	Microcebus murinus	ENSMICG00000011710	I	0.742
HOXC11	Myotis lucifugus	ENSMLUG00000000470	I	0.742
HOXD11	Myotis lucifugus	ENSMLUG00000007030	I	0.742
HOXA11	Myotis lucifugus	ENSMLUG00000008300	I	0.742
HOXC11	Macaca mulatta	ENSMMUG00000000924	I	0.742
ENSMMUG00000013462	Macaca mulatta	ENSMMUG00000013462	I	0.742
HOXA11	Monodelphis domestica	ENSMODG00000000453	I	0.742
HOXD11	Monodelphis domestica	ENSMODG00000009565	I	0.742
ENSMPUG00000004822	Mustela putorius furo	ENSMPUG00000004822	I	0.742
ENSMPUG00000005876	Mustela putorius furo	ENSMPUG00000005876	I	0.742
ENSMPUG00000014029	Mustela putorius furo	ENSMPUG00000014029	I	0.742
Hoxc11	Mus musculus	ENSMUSG00000001656	D	0.742
Hoxa11	Mus musculus	ENSMUSG00000038210	D	0.742
Hoxd11	Mus musculus	ENSMUSG00000042499	D	0.742
ENSNLEG00000006009	Nomascus leucogenys	ENSNLEG00000006009	I	0.742
ENSNLEG00000014994	Nomascus leucogenys	ENSNLEG00000014994	I	0.742
HOXA11	Ornithorhynchus anatinus	ENSOANG00000009172	I	0.742
ENSOANG00000013040	Ornithorhynchus anatinus	ENSOANG00000013040	I	0.742
ENSOARG00000016342	Ovis aries	ENSOARG00000016342	I	0.742
ENSOARG00000019633	Ovis aries	ENSOARG00000019633	I	0.742
HOXC11	Oryctolagus cuniculus	ENSOCUG00000001159	I	0.742
HOXD11	Oryctolagus cuniculus	ENSOCUG00000013942	I	0.742
HOXA11	Oryctolagus cuniculus	ENSOCUG00000015170	I	0.742
HOXA11	Otolemur garnettii	ENSOGAG00000012389	I	0.742
HOXD11	Otolemur garnettii	ENSOGAG00000029520	I	0.742
ENSONIG00000002963	Oreochromis niloticus	ENSONIG00000002963	I	0.742
ENSONIG00000004600	Oreochromis niloticus	ENSONIG00000004600	I	0.742
ENSONIG00000008616	Oreochromis niloticus	ENSONIG00000008616	I	0.742
ENSONIG00000012235	Oreochromis niloticus	ENSONIG00000012235	I	0.742
hoxa11a	Oryzias latipes	ENSORLG00000005037	I	0.742
hoxa11b	Oryzias latipes	ENSORLG00000007608	I	0.742
hoxc11a	Oryzias latipes	ENSORLG00000007909	I	0.742
ENSPANG00000016365	Papio anubis	ENSPANG00000016365	I	0.742
ENSPANG00000026298	Papio anubis	ENSPANG00000026298	I	0.742
ENSPFOG00000002068	Poecilia formosa	ENSPFOG00000002068	I	0.742
ENSPFOG00000023998	Poecilia formosa	ENSPFOG00000023998	I	0.742
ENSPFOG00000024708	Poecilia formosa	ENSPFOG00000024708	I	0.742
ENSPPYG00000004590	Pongo abelii	ENSPPYG00000004590	I	0.742
ENSPPYG00000012954	Pongo abelii	ENSPPYG00000012954	I	0.742
ENSPPYG00000017698	Pongo abelii	ENSPPYG00000017698	I	0.742
ENSPSIG00000002763	Pelodiscus sinensis	ENSPSIG00000002763	I	0.742
ENSPSIG00000003098	Pelodiscus sinensis	ENSPSIG00000003098	I	0.742
ENSPSIG00000004848	Pelodiscus sinensis	ENSPSIG00000004848	I	0.742
HOXC11	Pan troglodytes	ENSPTRG00000005027	I	0.742
HOXD11	Pan troglodytes	ENSPTRG00000012666	I	0.742
HOXA11	Pan troglodytes	ENSPTRG00000019020	I	0.742
HOXA11	Pteropus vampyrus	ENSPVAG00000002500	I	0.742
HOXC11	Pteropus vampyrus	ENSPVAG00000012298	I	0.742
Hoxc11	Rattus norvegicus	ENSRNOG00000016141	I	0.742
Hoxd11	Rattus norvegicus	ENSRNOG00000051472	I	0.742
Hoxa11	Rattus norvegicus	ENSRNOG00000053884	I	0.742
Hoxa11	Rattus norvegicus	ENSRNOG00000059870	I	0.742
Hoxa11	Rattus norvegicus	ENSRNOG00000061531	I	0.742
ENSSHAG00000006420	Sarcophilus harrisii	ENSSHAG00000006420	I	0.742
ENSSHAG00000015976	Sarcophilus harrisii	ENSSHAG00000015976	I	0.742
ENSSHAG00000016623	Sarcophilus harrisii	ENSSHAG00000016623	I	0.742
HOXA11	Sus scrofa	ENSSSCG00000016698	I	0.742
ENSSTOG00000022674	Ictidomys tridecemlineatus	ENSSTOG00000022674	I	0.742
ENSSTOG00000028958	Ictidomys tridecemlineatus	ENSSTOG00000028958	I	0.742
HOXA11	Taeniopygia guttata	ENSTGUG00000002925	I	0.742
HOXD11	Taeniopygia guttata	ENSTGUG00000008941	I	0.742
hoxa11b	Tetraodon nigroviridis	ENSTNIG00000000494	I	0.742
hoxa11a	Tetraodon nigroviridis	ENSTNIG00000001767	I	0.742
hoxc11a	Tetraodon nigroviridis	ENSTNIG00000001772	I	0.742
hoxd11a	Tetraodon nigroviridis	ENSTNIG00000001776	I	0.742
ENSTRUG00000004120	Takifugu rubripes	ENSTRUG00000004120	I	0.742
ENSTSYG00000006241	Tarsius syrichta	ENSTSYG00000006241	I	0.742
ENSXMAG00000000427	Xiphophorus maculatus	ENSXMAG00000000427	I	0.742
ENSXMAG00000001061	Xiphophorus maculatus	ENSXMAG00000001061	I	0.742
ENSXMAG00000001648	Xiphophorus maculatus	ENSXMAG00000001648	I	0.742
Aan_R001090

Hoxc9 (Mus musculus) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

Experimental Constructs

DNA Binding Domains

Links

1644 Related TFs

Hoxc9 **(Mus musculus)
Homeodomain**