hox10 (Ciona intestinalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCING00000001031 T207811_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q24782_9CNID
M02206_2.00 		Eleutheria dichotoma
TTAATTAA
TTAATTAA		 PBM
Weirauch et al.(2014)
pTH5486 		0.686 0.649
hoxd13a
M02081_2.00 		Danio rerio
WTTTATDR
YHATAAAW		 PBM
Weirauch et al.(2014)
pTH6143 		0.672 0.579
Hoxc13
M00389_2.00 		Mus musculus
NTTWAYDRNN
NNYHRTWAAN		 PBM
Berger et al.(2008)
Hoxc13_3127 		0.659 0.561
HOXC13
M03129_2.00 		Homo sapiens
NTTTTATTRS
SYAATAAAAN		 SELEX
Jolma et al.(2013)
HOXC13_1 		0.659 0.561
HOXC13
M03130_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXC13_2 		0.659 0.561
HOXC13
M05072_2.00 		Homo sapiens
RKTTTATKGSN
NSCMATAAAMY		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_1 		0.659 0.561
HOXC13
M05073_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_2 		0.659 0.561
HOXC13
M10680_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC13_Q2 		0.659 0.561
HOXD13
M00295_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_N298S 		0.659 0.561
HOXC13
M05074_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_Methyl-HT-SELEX 		0.659 0.561
HOXD13
M00299_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_REF 		0.659 0.544
Hoxd13
M00394_2.00 		Mus musculus
NWTHRYDDN
NHHRYDAWN		 PBM
Berger et al.(2008)
Hoxd13_2356 		0.659 0.544
Hoxa13
M00473_2.00 		Mus musculus
NTTWAYDRN
NYHRTWAAN		 PBM
Berger et al.(2008)
Hoxa13_3126 		0.659 0.544
HOXA13
M03098_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_1 		0.659 0.544
HOXA13
M03099_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_2 		0.659 0.544
HOXA13
M03100_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_3 		0.659 0.544
HOXA13
M03101_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_4 		0.659 0.544
HOXD13
M03141_2.00 		Homo sapiens
DTTTTATKRS
SYMATAAAAH		 SELEX
Jolma et al.(2013)
HOXD13_1 		0.659 0.544
HOXD13
M03142_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXD13_2 		0.659 0.544
Hoxd13
M03247_2.00 		Mus musculus
DKTTTATTRS
SYAATAAAMH		 SELEX
Jolma et al.(2013)
Hoxd13_1 		0.659 0.544
Hoxd13
M03248_2.00 		Mus musculus
DDTTTAYKAGN
NCTMRTAAAHH		 SELEX
Jolma et al.(2013)
Hoxd13_2 		0.659 0.544
HOXA13
M04977_2.00 		Homo sapiens
DTTTTATKGGB
VCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_1 		0.659 0.544
HOXA13
M04978_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_2 		0.659 0.544
HOXA13
M04981_2.00 		Homo sapiens
DTTTTATKRSN
NSYMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_1 		0.659 0.544
HOXA13
M04982_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_2 		0.659 0.544
HOXD13
M05122_2.00 		Homo sapiens
GKTTTATKGSS
SSCMATAAAMC		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_1 		0.659 0.544
HOXD13
M05123_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_2 		0.659 0.544
HOXA13
M09134_2.00 		Homo sapiens
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_HUMAN.H11MO.0.C 		0.659 0.544
Hoxa13
M09202_2.00 		Mus musculus
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_MOUSE.H11MO.0.C 		0.659 0.544
HOXA13
M10653_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_01 		0.659 0.544
HOXA13
M10654_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_02 		0.659 0.544
HOXD13
M10689_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD13_Q6 		0.659 0.544
HOXD13
M00293_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_I297V 		0.659 0.544
HOXD13
M00300_2.00 		Homo sapiens
WTTTATDR
YHATAAAW		 PBM
Barrera et al.(2016)
HOXD13_S316C 		0.659 0.544
HOXA13
M04979_2.00 		Homo sapiens
DTTTTATTRSN
NSYAATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_1 		0.659 0.544
HOXA13
M04980_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_2 		0.659 0.544
HOXA13
M04983_2.00 		Homo sapiens
DKTTTATTGBN
NVCAATAAAMH		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_1 		0.659 0.544
HOXA13
M04984_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_2 		0.659 0.544
HOXD13
M05124_2.00 		Homo sapiens
DDTTTATTRBB
VVYAATAAAHH		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_1 		0.659 0.544
HOXD13
M05125_2.00 		Homo sapiens
VCTCGTAAAAH
DTTTTACGAGB		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_2 		0.659 0.544
HOXD13
M00298_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_R306W 		0.651 0.526
Hoxd10
M00509_2.00 		Mus musculus
NNNNNNNN
NNNNNNNN		 PBM
Berger et al.(2008)
Hoxd10_2368 		0.649 0.807
HOXD10
M05112_2.00 		Homo sapiens
NKTTTATKRC
GYMATAAAMN		 SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1 		0.649 0.807
HOXD10
M05113_2.00 		Homo sapiens
RTCGTAAAHN
NDTTTACGAY		 SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2 		0.649 0.807
HOXD10
M05116_2.00 		Homo sapiens
RGTCGTAAAAH
DTTTTACGACY		 SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1 		0.649 0.807
HOXD10
M05117_2.00 		Homo sapiens
RRYMATAAAAH
DTTTTATKRYY		 SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2 		0.649 0.807
HOXD10
M10687_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD10_Q2 		0.649 0.807
HOXD10
M10688_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD10_Q6 		0.649 0.807
HOXD10
M05114_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1 		0.649 0.807
HOXD10
M05115_2.00 		Homo sapiens
GTCGTAAAHN
NDTTTACGAC		 SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2 		0.649 0.807
HOXD10
M05118_2.00 		Homo sapiens
VGTCGTAAAAH
DTTTTACGACB		 SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1 		0.649 0.807
HOXD10
M05119_2.00 		Homo sapiens
DGYAATAAAAH
DTTTTATTRCH		 SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2 		0.649 0.807
Hoxa10
M00382_2.00 		Mus musculus
NHWAYNNNN
NNNNRTWDN		 PBM
Berger et al.(2008)
Hoxa10_2318 		0.649 0.789
HOXA10
M05394_2.00 		Homo sapiens
RRTCGTAAAAH
DTTTTACGAYY		 SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1 		0.649 0.789
HOXA10
M05395_2.00 		Homo sapiens
NTTTTATKRCY
RGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2 		0.649 0.789
HOXA10
M05398_2.00 		Homo sapiens
NRTCRTWAANN
NNTTWAYGAYN		 SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1 		0.649 0.789
HOXA10
M05399_2.00 		Homo sapiens
NNTTWATKRCN
NGYMATWAANN		 SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2 		0.649 0.789
Hoxa10
M09170_2.00 		Mus musculus
DCATAAAYYRBH
DVYRRTTTATGH		 Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C 		0.649 0.789
Hoxa10
M10763_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA10_Q5 		0.649 0.789
HOXA10
M05396_2.00 		Homo sapiens
NGTCGTAAAWN
NWTTTACGACN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1 		0.649 0.789
HOXA10
M05397_2.00 		Homo sapiens
NTTTTATKRCB
VGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2 		0.649 0.789
HOXA10
M05400_2.00 		Homo sapiens
NRTCGTWAANN
NNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1 		0.649 0.789
HOXA10
M05401_2.00 		Homo sapiens
NNTTWATKRYN
NRYMATWAANN		 SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2 		0.649 0.789
Hoxc12
M00508_2.00 		Mus musculus
NDTWAYNDBN
NVHNRTWAHN		 PBM
Berger et al.(2008)
Hoxc12_3480 		0.646 0.596
HOXC12
M03135_2.00 		Homo sapiens
TTTTATTRY
RYAATAAAA		 SELEX
Jolma et al.(2013)
HOXC12_1 		0.646 0.596
HOXC12
M03136_2.00 		Homo sapiens
RRTCGTAAAAH
DTTTTACGAYY		 SELEX
Jolma et al.(2013)
HOXC12_2 		0.646 0.596
HOXC12
M05083_2.00 		Homo sapiens
NGYAATAAAAN
NTTTTATTRCN		 SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_1 		0.646 0.596
HOXC12
M05084_2.00 		Homo sapiens
VRTCGTAAAHN
NDTTTACGAYB		 SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_2 		0.646 0.596
HOXC12
M05085_2.00 		Homo sapiens
NGYAATAAAAH
DTTTTATTRCN		 SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_1 		0.646 0.596
HOXC12
M05086_2.00 		Homo sapiens
NRTCGTAAAHH
DDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_2 		0.646 0.596
HOXD13
M00294_2.00 		Homo sapiens
THGTWAAW
WTTWACDA		 PBM
Barrera et al.(2016)
HOXD13_I322L 		0.641 0.526
ceh-22
M00376_2.00 		Caenorhabditis elegans
WBRAGTRBNN
NNVYACTYVW		 PBM
Berger et al.(2006)
Ceh-22 		0.632 0.526
Hoxc10
M00421_2.00 		Mus musculus
TTWATKAB
VTMATWAA		 PBM
Berger et al.(2008)
Hoxc10_2779 		0.631 0.772
HOXC10
M03228_2.00 		Homo sapiens
DTTTWATKDB
VHMATWAAAH		 SELEX
Jolma et al.(2013)
HOXC10_1 		0.631 0.772
HOXC10
M03229_2.00 		Homo sapiens
NNTTWATKRB
VYMATWAANN		 SELEX
Jolma et al.(2013)
HOXC10_2 		0.631 0.772
HOXC10
M03230_2.00 		Homo sapiens
NWTTWAYGAB
VTCRTWAAWN		 SELEX
Jolma et al.(2013)
HOXC10_3 		0.631 0.772
Hoxc10
M03252_2.00 		Mus musculus
DTTTWAYGAY
RTCRTWAAAH		 SELEX
Jolma et al.(2013)
Hoxc10_1 		0.631 0.772
Hoxc10
M03253_2.00 		Mus musculus
DTTTWATKRY
RYMATWAAAH		 SELEX
Jolma et al.(2013)
Hoxc10_2 		0.631 0.772
HOXC10
M05335_2.00 		Homo sapiens
NDTTTATKRCN
NGYMATAAAHN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1 		0.631 0.772
HOXC10
M05336_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2 		0.631 0.772
HOXC10
M05339_2.00 		Homo sapiens
NTTTTATKRCN
NGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1 		0.631 0.772
HOXC10
M05340_2.00 		Homo sapiens
NRTCGTAAAWN
NWTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2 		0.631 0.772
HOXC10
M05337_2.00 		Homo sapiens
NTTTTATKRCN
NGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1 		0.631 0.772
HOXC10
M05338_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2 		0.631 0.772
HOXC10
M05341_2.00 		Homo sapiens
DTTTTATKRCH
DGYMATAAAAH		 SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1 		0.631 0.772
HOXC10
M05342_2.00 		Homo sapiens
VGTCGTAAAHN
NDTTTACGACB		 SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2 		0.631 0.772
Nkx2-3
M00497_2.00 		Mus musculus
NNRAGDRNN
NNYHCTYNN		 PBM
Berger et al.(2008)
Nkx2-3_3435 		0.630 0.526
NKX2-3
M05042_2.00 		Homo sapiens
NNBAAGTGBN
NVCACTTVNN		 SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX 		0.630 0.526
NKX2-3
M05045_2.00 		Homo sapiens
BNBAAGTGBN
NVCACTTVNV		 SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX 		0.630 0.526
NKX2-3
M05043_2.00 		Homo sapiens
BNBAAGTGBN
NVCACTTVNV		 SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1 		0.630 0.526
NKX2-3
M05044_2.00 		Homo sapiens
SDYAACGHB
VDCGTTRHS		 SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2 		0.630 0.526
NKX2-3
M05046_2.00 		Homo sapiens
BNBAAGTGBN
NVCACTTVNV		 SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1 		0.630 0.526
NKX2-3
M05047_2.00 		Homo sapiens
SWYAACSHB
VDSGTTRWS		 SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2 		0.630 0.526
Hoxd11
M00493_2.00 		Mus musculus
DDDNNNNN
NNNNNHHH		 PBM
Berger et al.(2008)
Hoxd11_3873 		0.620 0.667
HOXD11
M03139_2.00 		Homo sapiens
RTCGTAAAWH
DWTTTACGAY		 SELEX
Jolma et al.(2013)
HOXD11_1 		0.620 0.667
HOXD11
M03140_2.00 		Homo sapiens
TTTWATKRBH
DVYMATWAAA		 SELEX
Jolma et al.(2013)
HOXD11_2 		0.620 0.667
HOXD11
M05120_2.00 		Homo sapiens
NRTCGTWAANNDTWAH
DTWAHNNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX 		0.620 0.667
HOXD11
M05121_2.00 		Homo sapiens
NRTCGTWAAHNDTWAH
DTWAHNDTTWACGAYN		 SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX 		0.620 0.667
Hoxa11
M00474_2.00 		Mus musculus
NNHNHNNNN
NNNNDNDNN		 PBM
Berger et al.(2008)
Hoxa11_2218 		0.620 0.649
Hoxa11
M03274_2.00 		Mus musculus
NNDTTWAYGABN
NVTCRTWAAHNN		 SELEX
Jolma et al.(2013)
Hoxa11_1 		0.620 0.649
Hoxa11
M03275_2.00 		Mus musculus
NDTTWATKRNN
NNYMATWAAHN		 SELEX
Jolma et al.(2013)
Hoxa11_2 		0.620 0.649
HOXA11
M04897_2.00 		Homo sapiens
VGTCGTAAAWH
DWTTTACGACB		 SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1 		0.620 0.649
HOXA11
M04898_2.00 		Homo sapiens
DDTTWATKRSN
NSYMATWAAHH		 SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2 		0.620 0.649
HOXA11
M04899_2.00 		Homo sapiens
NRTCGTAAAWH
DWTTTACGAYN		 SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1 		0.620 0.649
HOXA11
M04900_2.00 		Homo sapiens
DYTTTATKRCH
DGYMATAAARH		 SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2 		0.620 0.649
Hoxc11
M00390_2.00 		Mus musculus
NTTWAYDDBN
NVHHRTWAAN		 PBM
Berger et al.(2008)
Hoxc11_3718 		0.620 0.632
HOXC11
M03131_2.00 		Homo sapiens
NWTTWAYGAYH
DRTCRTWAAWN		 SELEX
Jolma et al.(2013)
HOXC11_1 		0.620 0.632
HOXC11
M03132_2.00 		Homo sapiens
NWTTWATKRBH
DVYMATWAAWN		 SELEX
Jolma et al.(2013)
HOXC11_2 		0.620 0.632
HOXC11
M03133_2.00 		Homo sapiens
DRTCGTWAAWN
NWTTWACGAYH		 SELEX
Jolma et al.(2013)
HOXC11_3 		0.620 0.632
HOXC11
M03134_2.00 		Homo sapiens
NTTTTATKRBN
NVYMATAAAAN		 SELEX
Jolma et al.(2013)
HOXC11_4 		0.620 0.632
HOXC11
M05075_2.00 		Homo sapiens
NDTTWACGAYN
NRTCGTWAAHN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1 		0.620 0.632
HOXC11
M05076_2.00 		Homo sapiens
NWTTWATKRCH
DGYMATWAAWN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2 		0.620 0.632
HOXC11
M05079_2.00 		Homo sapiens
NRTCGTWAAHN
NDTTWACGAYN		 SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1 		0.620 0.632
HOXC11
M05080_2.00 		Homo sapiens
NDTTWATKRSN
NSYMATWAAHN		 SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2 		0.620 0.632
HOXC11
M05077_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1 		0.620 0.632
HOXC11
M05078_2.00 		Homo sapiens
NDTTTATKRSN
NSYMATAAAHN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2 		0.620 0.632
HOXC11
M05081_2.00 		Homo sapiens
NRTCGTWAANN
NNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1 		0.620 0.632
HOXC11
M05082_2.00 		Homo sapiens
NNTTWAYKRSN
NSYMRTWAANN		 SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2 		0.620 0.632
NKX2-5
M00323_2.00 		Homo sapiens
NWYAAGTGSNN
NNSCACTTRWN		 PBM
Barrera et al.(2016)
NKX2-5_REF 		0.618 0.509
Nkx2-5
M00404_2.00 		Mus musculus
NNNRAGDRBN
NVYHCTYNNN		 PBM
Berger et al.(2008)
Nkx2-5_3436 		0.618 0.509
NKX2-5
M05346_2.00 		Homo sapiens
BHYAAGTGBN
NVCACTTRDV		 SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX 		0.618 0.509
Nkx2-5
M02686_2.00 		Mus musculus
WTAAKWK
MWMTTAW		 SELEX
Mathelier et al.(2014)
MA0063.1 		0.618 0.509
Nkx2-5
M08136_2.00 		Mus musculus
SYTGAGWGSYH
DRSCWCTCARS		 ChIP-seq
Mathelier et al.(2014)
MA0503.1 		0.618 0.509
NKX2-5
M09163_2.00 		Homo sapiens
BKRAGWGV
BCWCTYMV		 Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B 		0.618 0.509
Nkx2-5
M09177_2.00 		Mus musculus
NBYBRAGTGS
SCACTYVRVN		 Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A 		0.618 0.509
Nkx2-5
M09567_2.00 		Mus musculus
HBRAGWGBNN
NNVCWCTYVD		 Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529 		0.618 0.509
NKX2-5
M10742_2.00 		Homo sapiens
TYAAGTG
CACTTRA		 Transfac
Matys et al.(2006)
V$NKX25_01 		0.618 0.509
NKX2-5
M10743_2.00 		Homo sapiens
CWTAATTV
BAATTAWG		 Transfac
Matys et al.(2006)
V$NKX25_02 		0.618 0.509
NKX2-5
M10744_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX25_Q5 		0.618 0.509
NKX2-5
M10745_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX25_Q6 		0.618 0.509
NKX2-5
M00321_2.00 		Homo sapiens
HNAAGTRBNN
NNVYACTTND		 PBM
Barrera et al.(2016)
NKX2-5_R161P 		0.618 0.509
NKX2-5
M05347_2.00 		Homo sapiens
BTYAAGTGGN
NCCACTTRAV		 SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1 		0.618 0.509
NKX2-5
M05348_2.00 		Homo sapiens
BTYAACGAB
VTCGTTRAV		 SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2 		0.618 0.509
NKX2-5
M00322_2.00 		Homo sapiens
NNNRNNN
NNNYNNN		 PBM
Barrera et al.(2016)
NKX2-5_R190C 		0.618 0.491
NKX2-5
M00324_2.00 		Homo sapiens
NHNNNNN
NNNNNDN		 PBM
Barrera et al.(2016)
NKX2-5_T178M 		0.618 0.491
ceh-24
M02181_2.00 		Caenorhabditis elegans
NNRAKWRNN
NNYWMTYNN		 PBM
Weirauch et al.(2014)
pTH6327 		0.618 0.474
Nkx2-6
M00496_2.00 		Mus musculus
HYAAGTRBNN
NNVYACTTRD		 PBM
Berger et al.(2008)
Nkx2-6_3437 		0.618 0.474
tin
M00559_2.00 		Drosophila melanogaster
NWYAAGTGGNN
NNCCACTTRWN		 PBM
Busser et al.(2012a)
Tin 		0.618 0.474
tin
M03809_2.00 		Drosophila melanogaster
BTYAAGTGSN
NSCACTTRAV		 SELEX
Nitta et al.(2015)
tin_1 		0.618 0.474
tin
M06284_2.00 		Drosophila melanogaster
BTYAAGTG
CACTTRAV		 B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110 		0.618 0.474
tin
M06285_2.00 		Drosophila melanogaster
BCTCAAGTGSVN
NBSCACTTGAGV		 B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110 		0.618 0.474
tin
M06286_2.00 		Drosophila melanogaster
BWYAAGTR
YACTTRWV		 B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110 		0.618 0.474
tin
M08421_2.00 		Drosophila melanogaster
DBTCRAGTGS
SCACTYGAVH		 ChIP-chip
Mathelier et al.(2014)
MA0247.2 		0.618 0.474
Hoxd9
M03282_2.00 		Mus musculus
TTTWATKKB
VMMATWAAA		 SELEX
Jolma et al.(2013)
Hoxd9_1 		0.617 0.754
Hoxd9
M03283_2.00 		Mus musculus
DWTTWATKRY
RYMATWAAWH		 SELEX
Jolma et al.(2013)
Hoxd9_2 		0.617 0.754
Hoxd9
M03284_2.00 		Mus musculus
DTTWAYGRB
VYCRTWAAH		 SELEX
Jolma et al.(2013)
Hoxd9_3 		0.617 0.754
HOXC9
M05331_2.00 		Homo sapiens
GTCGTAAAAN
NTTTTACGAC		 SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1 		0.617 0.754
HOXC9
M05332_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2 		0.617 0.754
HOXD9
M05104_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1 		0.617 0.754
HOXD9
M05105_2.00 		Homo sapiens
RTCRTAAAWN
NWTTTAYGAY		 SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2 		0.617 0.754
HOXD9
M05108_2.00 		Homo sapiens
RTCGTAAAWN
NWTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1 		0.617 0.754
HOXD9
M05109_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2 		0.617 0.754
HOXC9
M09161_2.00 		Homo sapiens
HTTWATKGCH
DGCMATWAAD		 Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C 		0.617 0.754
HOXD9
M10686_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD9_Q2 		0.617 0.754
HOXC9
M05333_2.00 		Homo sapiens
RTCGTAAAHN
NDTTTACGAY		 SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1 		0.617 0.754
HOXC9
M05334_2.00 		Homo sapiens
NTTTWATKRC
GYMATWAAAN		 SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2 		0.617 0.754
HOXD9
M05106_2.00 		Homo sapiens
NNTTWATKRC
GYMATWAANN		 SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1 		0.617 0.754
HOXD9
M05107_2.00 		Homo sapiens
RTCGTAAANN
NNTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2 		0.617 0.754
HOXD9
M05110_2.00 		Homo sapiens
RTCGTAAANN
NNTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1 		0.617 0.754
HOXD9
M05111_2.00 		Homo sapiens
NDTTWATKRC
GYMATWAAHN		 SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2 		0.617 0.754
Hoxb9
M00410_2.00 		Mus musculus
NTTWAYDDNN
NNHHRTWAAN		 PBM
Berger et al.(2008)
Hoxb9_3413 		0.617 0.737
Hoxa9
M00475_2.00 		Mus musculus
NNDDBNNN
NNNVHHNN		 PBM
Berger et al.(2008)
Hoxa9_2622 		0.617 0.737
HOXA9
M03085_2.00 		Homo sapiens
NNDTTWAYGAYN
NRTCRTWAAHNN		 SELEX
Jolma et al.(2013)
HOXA10_1 		0.617 0.737
HOXA9
M03086_2.00 		Homo sapiens
NDTTWATKRYN
NRYMATWAAHN		 SELEX
Jolma et al.(2013)
HOXA10_2 		0.617 0.737
HOXA9
M04932_2.00 		Homo sapiens
NNDWWABKRC
GYMVTWWHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1 		0.617 0.737
HOXA9
M04933_2.00 		Homo sapiens
NNDTWAYGRB
VYCRTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2 		0.617 0.737
HOXB9
M05289_2.00 		Homo sapiens
RTCRTAAAWN
NWTTTAYGAY		 SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1 		0.617 0.737
HOXB9
M05290_2.00 		Homo sapiens
NTTTWATKRC
GYMATWAAAN		 SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2 		0.617 0.737
Hoxa9
M08138_2.00 		Mus musculus
TGATTKATKRB
VYMATMAATCA		 ChIP-seq
Mathelier et al.(2014)
MA0594.1 		0.617 0.737
HOXA9
M09130_2.00 		Homo sapiens
DCATAAAYYRBH
DVYRRTTTATGH		 Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C 		0.617 0.737
HOXA9
M09131_2.00 		Homo sapiens
HHATAAATCAH
DTGATTTATDD		 Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B 		0.617 0.737
Hoxa9
M09203_2.00 		Mus musculus
HHATAAATCAH
DTGATTTATDD		 Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B 		0.617 0.737
Hoxa9
M09575_2.00 		Mus musculus
WGATTKATDRBY
RVYHATMAATCW		 Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509 		0.617 0.737
HOXA9
M10642_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA10_Q6 		0.617 0.737
HOXA9
M10643_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_04 		0.617 0.737
HOXA9
M10644_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_Q5_01 		0.617 0.737
HOXA9
M10645_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_Q5 		0.617 0.737
HOXB9
M05291_2.00 		Homo sapiens
GTCGTAAAHB
VDTTTACGAC		 SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX 		0.617 0.737
HOXA9
M04934_2.00 		Homo sapiens
NNDTWAYKRC
GYMRTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1 		0.617 0.737
HOXA9
M04935_2.00 		Homo sapiens
NNDTWACGAY
RTCGTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2 		0.617 0.737
ceh-28
M08210_2.00 		Caenorhabditis elegans
AATCGATW
WATCGATT		 ChIP-seq
Contrino et al.(2012)
Mw138 		0.616 0.491
hox12
M02075_2.00 		Ciona intestinalis
TTWAYKAY
RTMRTWAA		 PBM
Weirauch et al.(2014)
pTH6299 		0.613 0.649
Nkx2-9
M00520_2.00 		Mus musculus
NNNRAGDRBN
NVYHCTYNNN		 PBM
Berger et al.(2008)
Nkx2-9_3082 		0.611 0.509
Nkx2-9
M00800_2.00 		Mus musculus
NNRAGDRBNN
NNVYHCTYNN		 PBM
Weirauch et al.(2013)
pTH2842 		0.611 0.509
Nkx2-9
M09215_2.00 		Mus musculus
BTCAAGKRB
VYMCTTGAV		 Misc
Kulakovskiy et al.(2013)
NKX28_MOUSE.H11MO.0.C 		0.611 0.509
Meox1
M00384_2.00 		Mus musculus
NTRATKRNN
NNYMATYAN		 PBM
Berger et al.(2008)
Meox1_2310 		0.611 0.596
MEOX1
M03077_2.00 		Homo sapiens
NNTAATTASN
NSTAATTANN		 SELEX
Jolma et al.(2013)
MEOX1_1 		0.611 0.596
MEOX1
M04901_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1 		0.611 0.596
MEOX1
M04902_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2 		0.611 0.596
MEOX1
M04903_2.00 		Homo sapiens
NTAAYGWB
VWCRTTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1 		0.611 0.596
MEOX1
M04904_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2 		0.611 0.596
Mnx1
M00388_2.00 		Mus musculus
NTAATBDNNN
NNNHVATTAN		 PBM
Berger et al.(2008)
Hlxb9_3422 		0.610 0.632
MNX1
M03143_2.00 		Homo sapiens
NHTAATTRNH
DNYAATTADN		 SELEX
Jolma et al.(2013)
MNX1_1 		0.610 0.632
MNX1
M05126_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX 		0.610 0.632
MNX1
M05127_2.00 		Homo sapiens
HTAAYGHB
VDCRTTAD		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1 		0.610 0.632
MNX1
M05128_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2 		0.610 0.632
vnd
M06551_2.00 		Drosophila melanogaster
WYTCAAGTR
YACTTGARW		 B1H
Mathelier et al.(2014)
MA0253.1 		0.610 0.509
vnd
M06377_2.00 		Drosophila melanogaster
WYTCAAGTR
YACTTGARW		 B1H
Zhu et al.(2011)
Vnd_Cell_FBgn0003986 		0.610 0.509
vnd
M06378_2.00 		Drosophila melanogaster
KYTSAAGWGY
RCWCTTSARM		 B1H
Zhu et al.(2011)
vnd_FlyReg_FBgn0003986 		0.610 0.509
vnd
M06379_2.00 		Drosophila melanogaster
BTBAAGTR
YACTTVAV		 B1H
Zhu et al.(2011)
Vnd_SOLEXA_FBgn0003986 		0.610 0.509
vnd
M09683_2.00 		Drosophila melanogaster
TCAAGTGB
VCACTTGA		 Misc
Kulakovskiy et al.(2009)
vnd 		0.610 0.509
Nkx2-2
M00438_2.00 		Mus musculus
NNNRAGDRN
NYHCTYNNN		 PBM
Berger et al.(2008)
Nkx2-2_2823 		0.610 0.491
Nkx2-2
M09190_2.00 		Mus musculus
NTBRAGWGBBN
NVVCWCTYVAN		 Misc
Kulakovskiy et al.(2013)
NKX22_MOUSE.H11MO.0.A 		0.610 0.491
NKX2-2
M10681_2.00 		Homo sapiens
WTAAGTRBTT
AAVYACTTAW		 Transfac
Matys et al.(2006)
V$NKX22_01 		0.610 0.491
NKX2-2
M10682_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX2B_Q3_01 		0.610 0.491
NKX2-2
M10683_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NKX2B_Q3 		0.610 0.491
Hoxc9
M00470_2.00 		Mus musculus
NGTAATWAAN
NTTWATTACN		 PBM
Berger et al.(2008)
Hoxc9_2367 		0.609 0.737
Hoxc9
M08137_2.00 		Mus musculus
NWGATTTATDGSH
DSCHATAAATCWN		 ChIP-seq
Mathelier et al.(2014)
MA0485.1 		0.609 0.737
Hoxc9
M09574_2.00 		Mus musculus
TGATTTATDGCH
DGCHATAAATCA		 Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812 		0.609 0.737
scro
M03854_2.00 		Drosophila melanogaster
NNBRMGTGB
VCACKYVNN		 SELEX
Nitta et al.(2015)
scro_1 		0.606 0.491
Nkx2-1
M00385_2.00 		Mus musculus
NNRAGDRN
NYHCTYNN		 PBM
Berger et al.(2008)
Titf1_1722 		0.606 0.474
Nkx2-4
M00514_2.00 		Mus musculus
NNRAGDRBNN
NNVYHCTYNN		 PBM
Berger et al.(2008)
Nkx2-4_3074 		0.606 0.474
NKX2-1
M09146_2.00 		Homo sapiens
BTKGAGWGBN
NVCWCTCMAV		 Misc
Kulakovskiy et al.(2013)
NKX21_HUMAN.H11MO.0.A 		0.606 0.474
Nkx2-1
M09171_2.00 		Mus musculus
NBTKGAGWGB
VCWCTCMAVN		 Misc
Kulakovskiy et al.(2013)
NKX21_MOUSE.H11MO.0.A 		0.606 0.474
Nkx2-1
M09563_2.00 		Mus musculus
BTBRAGWGBH
DVCWCTYVAV		 Misc
Heinz et al.(2010)
LungAC-Nkx2.1_GSE43252 		0.606 0.474
NKX2-1
M10694_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TITF1_Q3 		0.606 0.474
NKX2-1
M10695_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TTF1_Q5_01 		0.606 0.474
NKX2-1
M10696_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TTF1_Q5 		0.606 0.474
NKX2-1
M10697_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TTF1_Q6 		0.606 0.474
Cdx1
M00427_2.00 		Mus musculus
NWWATDRNN
NNYHATWWN		 PBM
Berger et al.(2008)
Cdx1_2245 		0.605 0.596
Q70LF3_ARTSF
M02211_2.00 		Artemia franciscana
BTAATTAB
VTAATTAV		 PBM
Weirauch et al.(2014)
pTH5553 		0.605 0.596
CDX1
M03115_2.00 		Homo sapiens
NTTTATKRB
VYMATAAAN		 SELEX
Jolma et al.(2013)
CDX1_1 		0.605 0.596
CDX1
M05018_2.00 		Homo sapiens
VKTTTATKRCN
NGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX 		0.605 0.596
CDX1
M09140_2.00 		Homo sapiens
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C 		0.605 0.596
Cdx1
M09186_2.00 		Mus musculus
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C 		0.605 0.596
CDX1
M10670_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q4 		0.605 0.596
CDX1
M10671_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q5 		0.605 0.596
CDX1
M10761_2.00 		Gallus gallus
BDBWAAK
MTTWVHV		 Transfac
Matys et al.(2006)
V$CDXA_01 		0.605 0.596
CDX1
M10762_2.00 		Gallus gallus
WWWWMYR
YRKWAWW		 Transfac
Matys et al.(2006)
V$CDXA_02 		0.605 0.596
CDX1
M05019_2.00 		Homo sapiens
NGTCGTAAAWB
VWTTTACGACN		 SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX 		0.605 0.596
CDX2
M03196_2.00 		Homo sapiens
KTTTATKRB
VYMATAAAM		 SELEX
Jolma et al.(2013)
CDX2_1 		0.605 0.579
CDX2
M05248_2.00 		Homo sapiens
NDTWAYRRYN
NRYYRTWAHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1 		0.605 0.579
CDX2
M05249_2.00 		Homo sapiens
NDWWATKRB
VYMATWWHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2 		0.605 0.579
CDX2
M08131_2.00 		Homo sapiens
YTTTATKRCHB
VDGYMATAAAR		 ChIP-seq
Mathelier et al.(2014)
MA0465.1 		0.605 0.579
CDX2
M09152_2.00 		Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH		 Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A 		0.605 0.579
CDX2
M10723_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_01 		0.605 0.579
CDX2
M10724_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_02 		0.605 0.579
CDX2
M10725_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5 		0.605 0.579
CDX2
M10726_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q6 		0.605 0.579
CDX2
M05250_2.00 		Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN		 SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX 		0.605 0.579
Bsx
M00516_2.00 		Mus musculus
NTAAYBDNN
NNHVRTTAN		 PBM
Berger et al.(2008)
Bsx_3483 		0.603 0.509
bsh
M02113_2.00 		Drosophila melanogaster
NNTAAYBDNN
NNHVRTTANN		 PBM
Weirauch et al.(2014)
pTH6569 		0.603 0.509
BSX
M03235_2.00 		Homo sapiens
NTAATBRN
NYVATTAN		 SELEX
Jolma et al.(2013)
BSX_1 		0.603 0.509
bsh
M03786_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
bsh_1 		0.603 0.509
bsh
M03787_2.00 		Drosophila melanogaster
TAATTRVWTAATKR
YMATTAWBYAATTA		 SELEX
Nitta et al.(2015)
bsh_2 		0.603 0.509
bsh
M03788_2.00 		Drosophila melanogaster
NTAATBRN
NYVATTAN		 SELEX
Nitta et al.(2015)
bsh_3 		0.603 0.509
BSX
M05377_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1 		0.603 0.509
BSX
M05378_2.00 		Homo sapiens
BTAATBRV
BYVATTAV		 SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2 		0.603 0.509
bsh
M06483_2.00 		Drosophila melanogaster
YTAATBR
YVATTAR		 B1H
Mathelier et al.(2014)
MA0214.1 		0.603 0.509
bsh
M06231_2.00 		Drosophila melanogaster
HYTAATBRV
BYVATTARD		 B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529 		0.603 0.509
bsh
M06232_2.00 		Drosophila melanogaster
NTAATKR
YMATTAN		 B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529 		0.603 0.509
BSX
M05379_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1 		0.603 0.509
BSX
M05380_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2 		0.603 0.509
Abd-B
M00554_2.00 		Drosophila melanogaster
NWTWAYDDNN
NNHHRTWAWN		 PBM
Busser et al.(2012a)
Abd-B 		0.602 0.667
Abd-B
M03772_2.00 		Drosophila melanogaster
DRTCRTAAAWH
DWTTTAYGAYH		 SELEX
Nitta et al.(2015)
Abd-B_1 		0.602 0.667
Abd-B
M03773_2.00 		Drosophila melanogaster
DTTTTATKRCY
RGYMATAAAAH		 SELEX
Nitta et al.(2015)
Abd-B_2 		0.602 0.667
Abd-B
M03774_2.00 		Drosophila melanogaster
NKCARYAACGACYW
WRGTCGTTRYTGMN		 SELEX
Nitta et al.(2015)
Abd-B_3 		0.602 0.667
Abd-B
M03775_2.00 		Drosophila melanogaster
DTTTWATGKSTTTY
RAAASMCATWAAAH		 SELEX
Nitta et al.(2015)
Abd-B_4 		0.602 0.667
Abd-B
M06476_2.00 		Drosophila melanogaster
TTTATKR
YMATAAA		 B1H
Mathelier et al.(2014)
MA0165.1 		0.602 0.667
Abd-B
M06211_2.00 		Drosophila melanogaster
YCATAAAA
TTTTATGR		 B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015 		0.602 0.667
Abd-B
M09672_2.00 		Drosophila melanogaster
YMATAAAAHH
DDTTTTATKR		 Misc
Kulakovskiy et al.(2009)
Abd-B 		0.602 0.667
Abd-B
M10779_2.00 		Drosophila melanogaster
VSNTTDATKRCNNN
NNNGYMATHAANSB		 Transfac
Matys et al.(2006)
I$ABDB_01 		0.602 0.667
Abd-B
M10780_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDB_Q6 		0.602 0.667
Q7M3U4_ACRFO
M02212_2.00 		Acropora formosa
NNBTAWTTDNN
NNHAAWTAVNN		 PBM
Weirauch et al.(2014)
pTH6498 		0.602 0.614
Hoxd12_CONSTRUCT
M00538_2.00 		PBM CONSTRUCTS
NWTWAYNDBN
NVHNRTWAWN		 PBM
Berger et al.(2008)
Hoxd12_3481 		0.601 0.579
HOXD12
M03206_2.00 		Homo sapiens
SYAATAAAA
TTTTATTRS		 SELEX
Jolma et al.(2013)
HOXD12_1 		0.601 0.579
HOXD12
M03207_2.00 		Homo sapiens
RVTCGTAAAAH
DTTTTACGABY		 SELEX
Jolma et al.(2013)
HOXD12_2 		0.601 0.579
HOXD12
M03208_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Jolma et al.(2013)
HOXD12_3 		0.601 0.579
HOXD12
M03209_2.00 		Homo sapiens
DTTWATYRC
GYRATWAAH		 SELEX
Jolma et al.(2013)
HOXD12_4 		0.601 0.579
HOXD12
M05279_2.00 		Homo sapiens
NKTWACGAYN
NRTCGTWAMN		 SELEX
Yin et al.(2017)
HOXD12_eDBD_HT-SELEX 		0.601 0.579
HOXD12
M05280_2.00 		Homo sapiens
NRTCGTAAAH
DTTTACGAYN		 SELEX
Yin et al.(2017)
HOXD12_eDBD_Methyl-HT-SELEX 		0.601 0.579
CDX4
M05129_2.00 		Homo sapiens
VKTTTATKRCH
DGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX 		0.601 0.579
Cdx4
M09197_2.00 		Mus musculus
WGATTTATDRBH
DVYHATAAATCW		 Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A 		0.601 0.579
CDX4
M05130_2.00 		Homo sapiens
BGTCGTAAAHN
NDTTTACGACV		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1 		0.601 0.579
CDX4
M05131_2.00 		Homo sapiens
VKTTTATKGCN
NGCMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2 		0.601 0.579
Cdx2
M00447_2.00 		Mus musculus
NWWAYDRNN
NNYHRTWWN		 PBM
Berger et al.(2008)
Cdx2_4272 		0.601 0.561
Cdx2
M09193_2.00 		Mus musculus
BTTTATKRCYBY
RVRGYMATAAAV		 Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A 		0.601 0.561
Cdx2
M09572_2.00 		Mus musculus
NTTTTATKRC
GYMATAAAAN		 Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586 		0.601 0.561
btn
M03832_2.00 		Drosophila melanogaster
NNTAATKANB
VNTMATTANN		 SELEX
Nitta et al.(2015)
btn_1 		0.599 0.579
btn
M03833_2.00 		Drosophila melanogaster
VNTAATKABN
NVTMATTANB		 SELEX
Nitta et al.(2015)
btn_2 		0.599 0.579
btn
M06515_2.00 		Drosophila melanogaster
DTAATKA
TMATTAH		 B1H
Mathelier et al.(2014)
MA0215.1 		0.599 0.579
btn
M06307_2.00 		Drosophila melanogaster
NDTAATKA
TMATTAHN		 B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949 		0.599 0.579
btn
M06308_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949 		0.599 0.579
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000001927 Homeodomain 255 311

Links

Other Homeodomain family TFs
Other Ciona intestinalis TFs

2308 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAVG00000003530 Ciona savignyi ENSCSAVG00000003530 I 0.862
ENSNLEG00000017680 Nomascus leucogenys ENSNLEG00000017680 I 0.789
hoxc3a Danio rerio ENSDARG00000070339 I 0.730
RPRC012974 Rhodnius prolixus RPRC012974 I 0.725
CLEC008556 Cimex lectularius CLEC008556 I 0.725
HHAL002503-PA Halyomorpha halys HHAL002503-PA I 0.725
ENSPMAG00000000767 Petromyzon marinus ENSPMAG00000000767 I 0.687
Q24782_9CNID Eleutheria dichotoma Q24782_9CNID D 0.686
MCOS_0000875101 Mesocestoides corti MCOS_0000875101 I 0.685
ENSFALG00000014896 Ficedula albicollis ENSFALG00000014896 I 0.679
ENSAMXG00000006875 Astyanax mexicanus ENSAMXG00000006875 I 0.672
hoxd13a Danio rerio ENSDARG00000059256 D 0.672
ENSLOCG00000007161 Lepisosteus oculatus ENSLOCG00000007161 I 0.672
ENSAPLG00000013598 Anas platyrhynchos ENSAPLG00000013598 I 0.670
ENSGALG00000001543 Gallus gallus ENSGALG00000001543 I 0.669
Aan_R012455 Calypte anna Aan_R012455 I 0.669
ENSTGUG00000016958 Taeniopygia guttata ENSTGUG00000016958 I 0.667
gw.260.58.1 Branchiostoma floridae gw.260.58.1 I 0.666
gw.260.71.1 Branchiostoma floridae gw.260.71.1 I 0.666
Cmyd_10015813 Chelonia mydas Cmyd_10015813 I 0.660
HOXA13 Anolis carolinensis ENSACAG00000010302 I 0.659
HOXC13 Anolis carolinensis ENSACAG00000010829 I 0.659
ENSACAG00000017915 Anolis carolinensis ENSACAG00000017915 I 0.659
ENSAMEG00000000661 Ailuropoda melanoleuca ENSAMEG00000000661 I 0.659
ENSAMEG00000001865 Ailuropoda melanoleuca ENSAMEG00000001865 I 0.659
ENSAMEG00000005877 Ailuropoda melanoleuca ENSAMEG00000005877 I 0.659
ENSAMXG00000000621 Astyanax mexicanus ENSAMXG00000000621 I 0.659
ENSAMXG00000005151 Astyanax mexicanus ENSAMXG00000005151 I 0.659
ENSAMXG00000009345 Astyanax mexicanus ENSAMXG00000009345 I 0.659
ENSAMXG00000024685 Astyanax mexicanus ENSAMXG00000024685 I 0.659
ENSAPLG00000007333 Anas platyrhynchos ENSAPLG00000007333 I 0.659
ENSAPLG00000008742 Anas platyrhynchos ENSAPLG00000008742 I 0.659
HOXC13 Bos taurus ENSBTAG00000000923 I 0.659
HOXD13 Bos taurus ENSBTAG00000004313 I 0.659
HOXA13 Bos taurus ENSBTAG00000014735 I 0.659
HOXA13 Canis familiaris ENSCAFG00000002970 I 0.659
HOXC13 Canis familiaris ENSCAFG00000006648 I 0.659
ENSCHOG00000004807 Choloepus hoffmanni ENSCHOG00000004807 I 0.659
ENSCJAG00000008192 Callithrix jacchus ENSCJAG00000008192 I 0.659
HOXD13 Callithrix jacchus ENSCJAG00000008250 I 0.659
HOXC13 Callithrix jacchus ENSCJAG00000018800 I 0.659
HOXD13 Cavia porcellus ENSCPOG00000006722 I 0.659
HOXC13 Cavia porcellus ENSCPOG00000020390 I 0.659
ENSCPOG00000024869 Cavia porcellus ENSCPOG00000024869 I 0.659
ENSCSAG00000005461 Chlorocebus sabaeus ENSCSAG00000005461 I 0.659
ENSCSAG00000014315 Chlorocebus sabaeus ENSCSAG00000014315 I 0.659
ENSCSAG00000014475 Chlorocebus sabaeus ENSCSAG00000014475 I 0.659
hoxa13b Danio rerio ENSDARG00000036254 I 0.659
hoxc13a Danio rerio ENSDARG00000070353 I 0.659
hoxc13b Danio rerio ENSDARG00000090023 I 0.659
hoxa13a Danio rerio ENSDARG00000100312 I 0.659
HOXD13 Dasypus novemcinctus ENSDNOG00000019799 I 0.659
HOXA13 Dasypus novemcinctus ENSDNOG00000047528 I 0.659
ENSDORG00000006328 Dipodomys ordii ENSDORG00000006328 I 0.659
ENSECAG00000014192 Equus caballus ENSECAG00000014192 I 0.659
ENSECAG00000020388 Equus caballus ENSECAG00000020388 I 0.659
HOXC13 Equus caballus ENSECAG00000024867 I 0.659
ENSETEG00000006794 Echinops telfairi ENSETEG00000006794 I 0.659
ENSFALG00000003118 Ficedula albicollis ENSFALG00000003118 I 0.659
ENSFALG00000009407 Ficedula albicollis ENSFALG00000009407 I 0.659
ENSFCAG00000027459 Felis catus ENSFCAG00000027459 I 0.659
ENSFCAG00000028938 Felis catus ENSFCAG00000028938 I 0.659
ENSFCAG00000030694 Felis catus ENSFCAG00000030694 I 0.659
HOXA13 Homo sapiens ENSG00000106031 D 0.659
HOXC13 Homo sapiens ENSG00000123364 D 0.659
HOXD13 Homo sapiens ENSG00000128714 D 0.659
hoxa13a Gasterosteus aculeatus ENSGACG00000007134 I 0.659
hoxa13b Gasterosteus aculeatus ENSGACG00000008296 I 0.659
hoxc13a Gasterosteus aculeatus ENSGACG00000009389 I 0.659
ENSGALG00000009277 Gallus gallus ENSGALG00000009277 I 0.659
ENSGALG00000023129 Gallus gallus ENSGALG00000023129 I 0.659
HOXA13 Gallus gallus ENSGALG00000027234 I 0.659
ENSGALG00000027515 Gallus gallus ENSGALG00000027515 I 0.659
ENSGGOG00000001339 Gorilla gorilla ENSGGOG00000001339 I 0.659
HOXA13 Gorilla gorilla ENSGGOG00000005309 I 0.659
HOXC13 Gorilla gorilla ENSGGOG00000015765 I 0.659
ENSGGOG00000023186 Gorilla gorilla ENSGGOG00000023186 I 0.659
ENSGMOG00000005714 Gadus morhua ENSGMOG00000005714 I 0.659
ENSGMOG00000013892 Gadus morhua ENSGMOG00000013892 I 0.659
ENSGMOG00000017858 Gadus morhua ENSGMOG00000017858 I 0.659
ENSLACG00000016784 Latimeria chalumnae ENSLACG00000016784 I 0.659
ENSLACG00000017423 Latimeria chalumnae ENSLACG00000017423 I 0.659
ENSLAFG00000000738 Loxodonta africana ENSLAFG00000000738 I 0.659
HOXD13 Loxodonta africana ENSLAFG00000027629 I 0.659
HOXC13 Loxodonta africana ENSLAFG00000030195 I 0.659
ENSLOCG00000006295 Lepisosteus oculatus ENSLOCG00000006295 I 0.659
ENSLOCG00000011842 Lepisosteus oculatus ENSLOCG00000011842 I 0.659
ENSMGAG00000015900 Meleagris gallopavo ENSMGAG00000015900 I 0.659
ENSMICG00000000502 Microcebus murinus ENSMICG00000000502 I 0.659
HOXD13 Microcebus murinus ENSMICG00000002170 I 0.659
HOXD13 Myotis lucifugus ENSMLUG00000006997 I 0.659
HOXA13 Myotis lucifugus ENSMLUG00000008332 I 0.659
HOXC13 Myotis lucifugus ENSMLUG00000015050 I 0.659
ENSMMUG00000004542 Macaca mulatta ENSMMUG00000004542 I 0.659
HOXA13 Macaca mulatta ENSMMUG00000013463 I 0.659
ENSMMUG00000023500 Macaca mulatta ENSMMUG00000023500 I 0.659
HOXA13 Monodelphis domestica ENSMODG00000000449 I 0.659
HOXD13 Monodelphis domestica ENSMODG00000009550 I 0.659
ENSMPUG00000004851 Mustela putorius furo ENSMPUG00000004851 I 0.659
ENSMPUG00000005890 Mustela putorius furo ENSMPUG00000005890 I 0.659
ENSMPUG00000014022 Mustela putorius furo ENSMPUG00000014022 I 0.659
Hoxc13 Mus musculus ENSMUSG00000001655 D 0.659
Hoxd13 Mus musculus ENSMUSG00000001819 D 0.659
Hoxa13 Mus musculus ENSMUSG00000038203 D 0.659
ENSNLEG00000014997 Nomascus leucogenys ENSNLEG00000014997 I 0.659
ENSOANG00000004742 Ornithorhynchus anatinus ENSOANG00000004742 I 0.659
HOXA13 Ornithorhynchus anatinus ENSOANG00000009173 I 0.659
ENSOANG00000015090 Ornithorhynchus anatinus ENSOANG00000015090 I 0.659
ENSOARG00000000107 Ovis aries ENSOARG00000000107 I 0.659
ENSOARG00000009550 Ovis aries ENSOARG00000009550 I 0.659
ENSOARG00000016363 Ovis aries ENSOARG00000016363 I 0.659
HOXC13 Oryctolagus cuniculus ENSOCUG00000001156 I 0.659
ENSOCUG00000024694 Oryctolagus cuniculus ENSOCUG00000024694 I 0.659
ENSOCUG00000029547 Oryctolagus cuniculus ENSOCUG00000029547 I 0.659
HOXD13 Otolemur garnettii ENSOGAG00000027055 I 0.659
HOXA13 Otolemur garnettii ENSOGAG00000028983 I 0.659
HOXC13 Otolemur garnettii ENSOGAG00000030391 I 0.659
ENSONIG00000002962 Oreochromis niloticus ENSONIG00000002962 I 0.659
ENSONIG00000004601 Oreochromis niloticus ENSONIG00000004601 I 0.659
ENSONIG00000012232 Oreochromis niloticus ENSONIG00000012232 I 0.659
HOXC13 Ochotona princeps ENSOPRG00000006077 I 0.659
ENSOPRG00000010498 Ochotona princeps ENSOPRG00000010498 I 0.659
hoxa13a Oryzias latipes ENSORLG00000005043 I 0.659
hoxa13b Oryzias latipes ENSORLG00000007597 I 0.659
hoxc13a Oryzias latipes ENSORLG00000007896 I 0.659
ENSPANG00000002383 Papio anubis ENSPANG00000002383 I 0.659
ENSPANG00000012770 Papio anubis ENSPANG00000012770 I 0.659
ENSPANG00000020537 Papio anubis ENSPANG00000020537 I 0.659
ENSPFOG00000002100 Poecilia formosa ENSPFOG00000002100 I 0.659
ENSPFOG00000002494 Poecilia formosa ENSPFOG00000002494 I 0.659
ENSPFOG00000003827 Poecilia formosa ENSPFOG00000003827 I 0.659
ENSPPYG00000004588 Pongo abelii ENSPPYG00000004588 I 0.659
ENSPPYG00000012956 Pongo abelii ENSPPYG00000012956 I 0.659
ENSPPYG00000017697 Pongo abelii ENSPPYG00000017697 I 0.659
ENSPSIG00000002765 Pelodiscus sinensis ENSPSIG00000002765 I 0.659
ENSPSIG00000003141 Pelodiscus sinensis ENSPSIG00000003141 I 0.659
HOXC13 Pan troglodytes ENSPTRG00000005025 I 0.659
HOXD13 Pan troglodytes ENSPTRG00000012664 I 0.659
HOXA13 Pan troglodytes ENSPTRG00000028643 I 0.659
HOXC13 Pteropus vampyrus ENSPVAG00000012296 I 0.659
HOXD13 Pteropus vampyrus ENSPVAG00000017415 I 0.659
Hoxd13 Rattus norvegicus ENSRNOG00000001588 I 0.659
Hoxc13 Rattus norvegicus ENSRNOG00000028679 I 0.659
Hoxa13 Rattus norvegicus ENSRNOG00000053148 I 0.659
Hoxa13 Rattus norvegicus ENSRNOG00000057061 I 0.659
HOXC13 Sorex araneus ENSSARG00000005621 I 0.659
ENSSHAG00000005971 Sarcophilus harrisii ENSSHAG00000005971 I 0.659
ENSSHAG00000015915 Sarcophilus harrisii ENSSHAG00000015915 I 0.659
ENSSHAG00000016581 Sarcophilus harrisii ENSSHAG00000016581 I 0.659
HOXC13 Sus scrofa ENSSSCG00000000279 I 0.659
HOXD13 Sus scrofa ENSSSCG00000015979 I 0.659
ENSSSCG00000021780 Sus scrofa ENSSSCG00000021780 I 0.659
HOXA13 Sus scrofa ENSSSCG00000029666 I 0.659
ENSSTOG00000004117 Ictidomys tridecemlineatus ENSSTOG00000004117 I 0.659
ENSSTOG00000029157 Ictidomys tridecemlineatus ENSSTOG00000029157 I 0.659
HOXC13 Tupaia belangeri ENSTBEG00000016269 I 0.659
ENSTGUG00000008936 Taeniopygia guttata ENSTGUG00000008936 I 0.659
hoxc13a Tetraodon nigroviridis ENSTNIG00000001774 I 0.659
hoxa13b Tetraodon nigroviridis ENSTNIG00000001781 I 0.659
hoxa13a Tetraodon nigroviridis ENSTNIG00000009207 I 0.659
hoxc13a Takifugu rubripes ENSTRUG00000004383 I 0.659
hoxa13b Takifugu rubripes ENSTRUG00000015364 I 0.659
hoxa13a Takifugu rubripes ENSTRUG00000016010 I 0.659
ENSTRUG00000018251 Takifugu rubripes ENSTRUG00000018251 I 0.659
ENSTSYG00000003737 Tarsius syrichta ENSTSYG00000003737 I 0.659
HOXC13 Tursiops truncatus ENSTTRG00000004546 I 0.659
HOXD13 Tursiops truncatus ENSTTRG00000013771 I 0.659
HOXD13 Vicugna pacos ENSVPAG00000010195 I 0.659
ENSXMAG00000001062 Xiphophorus maculatus ENSXMAG00000001062 I 0.659
ENSXMAG00000001641 Xiphophorus maculatus ENSXMAG00000001641 I 0.659
ENSXMAG00000013901 Xiphophorus maculatus ENSXMAG00000013901 I 0.659
Aan_R001091 Calypte anna Aan_R001091 I 0.659
Aan_R004563 Calypte anna Aan_R004563 I 0.659
Aan_R014661 Calypte anna Aan_R014661 I 0.659
Afo_R003391 Aptenodytes forsteri Afo_R003391 I 0.659
Afo_R003417 Aptenodytes forsteri Afo_R003417 I 0.659
Afo_R006927 Aptenodytes forsteri Afo_R006927 I 0.659
Alligator_sinensis_CCG005377.1 Alligator sinensis Alligator_sinensis_CCG005377.1 I 0.659
Alligator_sinensis_CCG010655.1 Alligator sinensis Alligator_sinensis_CCG010655.1 I 0.659
Brh_R002806 Buceros rhinoceros Brh_R002806 I 0.659
Brh_R008277 Buceros rhinoceros Brh_R008277 I 0.659
Brh_R008776 Buceros rhinoceros Brh_R008776 I 0.659
ENSBTAP00000001222-D1 Bos grunniens ENSBTAP00000001222-D1 I 0.659
ENSBTAP00000005651-D1 Bos grunniens ENSBTAP00000005651-D1 I 0.659
ENSP00000222753-D1 Bos grunniens ENSP00000222753-D1 I 0.659
ENSP00000222753 Macaca fascicularis ENSP00000222753 I 0.659
ENSP00000376322 Macaca fascicularis ENSP00000376322 I 0.659
Gfo_R001376 Geospiza fortis Gfo_R001376 I 0.659
Gfo_R015836 Geospiza fortis Gfo_R015836 I 0.659
Myotis_brandtii_HOXC13_10022976 Myotis brandtii Myotis_brandtii_HOXC13_10022976 I 0.659
Myotis_brandtii_HOXD13_10034995 Myotis brandtii Myotis_brandtii_HOXD13_10034995 I 0.659
Ogr02757 Ophisaurus gracilis Ogr02757 I 0.659
Ogr14606 Ophisaurus gracilis Ogr14606 I 0.659
Pvit_02704 Pogona vitticeps Pvit_02704 I 0.659
Pvit_07423 Pogona vitticeps Pvit_07423 I 0.659
Tal_R009649 Tyto alba Tal_R009649 I 0.659
Tal_R009960 Tyto alba Tal_R009960 I 0.659
Tal_R011386 Tyto alba Tal_R011386 I 0.659
AAH80434 Xenopus laevis AAH80434 I 0.659
hoxa13.L Xenopus laevis XB-GENE-17335312 I 0.659
hoxc13 Xenopus tropicalis XB-GENE-478832 I 0.659
hoxa13 Xenopus tropicalis XB-GENE-479980 I 0.659
hoxd13 Xenopus tropicalis XB-GENE-482320 I 0.659
hoxd13.S Xenopus laevis XB-GENE-482324 I 0.659
hoxa13.S Xenopus laevis XB-GENE-865329 I 0.659
HOXA10 Anolis carolinensis ENSACAG00000010315 I 0.649
HOXD10 Anolis carolinensis ENSACAG00000017910 I 0.649
ENSAMEG00000001849 Ailuropoda melanoleuca ENSAMEG00000001849 I 0.649
ENSAMEG00000005883 Ailuropoda melanoleuca ENSAMEG00000005883 I 0.649
ENSAMXG00000000616 Astyanax mexicanus ENSAMXG00000000616 I 0.649
ENSAMXG00000005178 Astyanax mexicanus ENSAMXG00000005178 I 0.649
ENSAMXG00000006948 Astyanax mexicanus ENSAMXG00000006948 I 0.649
ENSAPLG00000008956 Anas platyrhynchos ENSAPLG00000008956 I 0.649
HOXD10 Bos taurus ENSBTAG00000016030 I 0.649
HOXA10 Bos taurus ENSBTAG00000040082 I 0.649
HOXA10 Canis familiaris ENSCAFG00000002963 I 0.649
HOXD10 Canis familiaris ENSCAFG00000013447 I 0.649
HOXA10 Callithrix jacchus ENSCJAG00000008173 I 0.649
HOXD10 Callithrix jacchus ENSCJAG00000008269 I 0.649
HOXD10 Cavia porcellus ENSCPOG00000011368 I 0.649
ENSCSAG00000014302 Chlorocebus sabaeus ENSCSAG00000014302 I 0.649
ENSCSAG00000014448 Chlorocebus sabaeus ENSCSAG00000014448 I 0.649
hoxa10b Danio rerio ENSDARG00000031337 I 0.649
hoxd10a Danio rerio ENSDARG00000057859 I 0.649
HOXD10 Dasypus novemcinctus ENSDNOG00000034389 I 0.649
ENSDNOG00000039533 Dasypus novemcinctus ENSDNOG00000039533 I 0.649
ENSDORG00000006324 Dipodomys ordii ENSDORG00000006324 I 0.649
HOXA10 Equus caballus ENSECAG00000012577 I 0.649
HOXD10 Equus caballus ENSECAG00000020599 I 0.649
HOXD10 Erinaceus europaeus ENSEEUG00000003440 I 0.649
HOXA10 Erinaceus europaeus ENSEEUG00000009849 I 0.649
HOXD10 Echinops telfairi ENSETEG00000011067 I 0.649
ENSFALG00000003142 Ficedula albicollis ENSFALG00000003142 I 0.649
HOXD10 Felis catus ENSFCAG00000006264 I 0.649
HOXA10 Felis catus ENSFCAG00000025359 I 0.649
HOXD10 Homo sapiens ENSG00000128710 D 0.649
HOXA10 Homo sapiens ENSG00000253293 D 0.649
ENSGACG00000007128 Gasterosteus aculeatus ENSGACG00000007128 I 0.649
hoxa10b Gasterosteus aculeatus ENSGACG00000008303 I 0.649
HOXD10 Gallus gallus ENSGALG00000009270 I 0.649
HOXD10 Gorilla gorilla ENSGGOG00000001341 I 0.649
HOXA10 Gorilla gorilla ENSGGOG00000002225 I 0.649
ENSGMOG00000012109 Gadus morhua ENSGMOG00000012109 I 0.649
ENSLACG00000009430 Latimeria chalumnae ENSLACG00000009430 I 0.649
ENSLACG00000015207 Latimeria chalumnae ENSLACG00000015207 I 0.649
ENSLACG00000017380 Latimeria chalumnae ENSLACG00000017380 I 0.649
HOXD10 Loxodonta africana ENSLAFG00000013262 I 0.649
HOXA10 Loxodonta africana ENSLAFG00000030920 I 0.649
ENSLOCG00000007118 Lepisosteus oculatus ENSLOCG00000007118 I 0.649
ENSLOCG00000011830 Lepisosteus oculatus ENSLOCG00000011830 I 0.649
ENSLOCG00000013455 Lepisosteus oculatus ENSLOCG00000013455 I 0.649
ENSMEUG00000001294 Macropus eugenii ENSMEUG00000001294 I 0.649
ENSMGAG00000016851 Meleagris gallopavo ENSMGAG00000016851 I 0.649
ENSMICG00000000499 Microcebus murinus ENSMICG00000000499 I 0.649
ENSMICG00000002191 Microcebus murinus ENSMICG00000002191 I 0.649
HOXD10 Myotis lucifugus ENSMLUG00000007048 I 0.649
ENSMLUG00000027272 Myotis lucifugus ENSMLUG00000027272 I 0.649
ENSMMUG00000013461 Macaca mulatta ENSMMUG00000013461 I 0.649
ENSMMUG00000023503 Macaca mulatta ENSMMUG00000023503 I 0.649
HOXA10 Monodelphis domestica ENSMODG00000000463 I 0.649
HOXD10 Monodelphis domestica ENSMODG00000009577 I 0.649
ENSMPUG00000004815 Mustela putorius furo ENSMPUG00000004815 I 0.649
ENSMPUG00000014049 Mustela putorius furo ENSMPUG00000014049 I 0.649
Hoxa10 Mus musculus ENSMUSG00000000938 D 0.649
Hoxd10 Mus musculus ENSMUSG00000050368 D 0.649
ENSNLEG00000006010 Nomascus leucogenys ENSNLEG00000006010 I 0.649
ENSNLEG00000018316 Nomascus leucogenys ENSNLEG00000018316 I 0.649
HOXA10 Ornithorhynchus anatinus ENSOANG00000009171 I 0.649
ENSOARG00000009675 Ovis aries ENSOARG00000009675 I 0.649
ENSOARG00000017514 Ovis aries ENSOARG00000017514 I 0.649
HOXD10 Oryctolagus cuniculus ENSOCUG00000008964 I 0.649
HOXA10 Otolemur garnettii ENSOGAG00000012385 I 0.649
HOXD10 Otolemur garnettii ENSOGAG00000015694 I 0.649
ENSONIG00000002964 Oreochromis niloticus ENSONIG00000002964 I 0.649
ENSONIG00000004598 Oreochromis niloticus ENSONIG00000004598 I 0.649
ENSONIG00000008614 Oreochromis niloticus ENSONIG00000008614 I 0.649
HOXD10 Ochotona princeps ENSOPRG00000004038 I 0.649
HOXA10 Ochotona princeps ENSOPRG00000010473 I 0.649
ENSORLG00000005034 Oryzias latipes ENSORLG00000005034 I 0.649
hoxa10b Oryzias latipes ENSORLG00000007617 I 0.649
hoxd10a Oryzias latipes ENSORLG00000017540 I 0.649
ENSPANG00000021024 Papio anubis ENSPANG00000021024 I 0.649
HOXD10 Procavia capensis ENSPCAG00000015648 I 0.649
HOXA10 Procavia capensis ENSPCAG00000016469 I 0.649
ENSPFOG00000002523 Poecilia formosa ENSPFOG00000002523 I 0.649
ENSPFOG00000014005 Poecilia formosa ENSPFOG00000014005 I 0.649
ENSPPYG00000012958 Pongo abelii ENSPPYG00000012958 I 0.649
ENSPPYG00000017699 Pongo abelii ENSPPYG00000017699 I 0.649
HOXD10 Pan troglodytes ENSPTRG00000012667 I 0.649
HOXA10 Pan troglodytes ENSPTRG00000019019 I 0.649
HOXA10 Pteropus vampyrus ENSPVAG00000002499 I 0.649
HOXD10 Pteropus vampyrus ENSPVAG00000017418 I 0.649
Hoxd10 Rattus norvegicus ENSRNOG00000001581 I 0.649
LOC100911668 Rattus norvegicus ENSRNOG00000027246 I 0.649
LOC100912608 Rattus norvegicus ENSRNOG00000050252 I 0.649
Hoxa10 Rattus norvegicus ENSRNOG00000057650 I 0.649
HOXD10 Sorex araneus ENSSARG00000007696 I 0.649
ENSSHAG00000016004 Sarcophilus harrisii ENSSHAG00000016004 I 0.649
HOXD10 Sus scrofa ENSSSCG00000015981 I 0.649
ENSSSCG00000016699 Sus scrofa ENSSSCG00000016699 I 0.649
HOXA10 Sus scrofa ENSSSCG00000021204 I 0.649
ENSSTOG00000003935 Ictidomys tridecemlineatus ENSSTOG00000003935 I 0.649
ENSSTOG00000021212 Ictidomys tridecemlineatus ENSSTOG00000021212 I 0.649
HOXD10 Tupaia belangeri ENSTBEG00000010925 I 0.649
HOXA10 Tupaia belangeri ENSTBEG00000011018 I 0.649
HOXD10 Taeniopygia guttata ENSTGUG00000008948 I 0.649
ENSTNIG00000001766 Tetraodon nigroviridis ENSTNIG00000001766 I 0.649
hoxd10a Tetraodon nigroviridis ENSTNIG00000001775 I 0.649
hoxa10b Tetraodon nigroviridis ENSTNIG00000001780 I 0.649
ENSTRUG00000015327 Takifugu rubripes ENSTRUG00000015327 I 0.649
ENSTRUG00000015981 Takifugu rubripes ENSTRUG00000015981 I 0.649
ENSTRUG00000017526 Takifugu rubripes ENSTRUG00000017526 I 0.649
HOXA10 Tursiops truncatus ENSTTRG00000003476 I 0.649
ENSXMAG00000013905 Xiphophorus maculatus ENSXMAG00000013905 I 0.649
Aan_R004560 Calypte anna Aan_R004560 I 0.649
Afo_R006931 Aptenodytes forsteri Afo_R006931 I 0.649
Alligator_sinensis_CCG010658.1 Alligator sinensis Alligator_sinensis_CCG010658.1 I 0.649
Brh_R008822 Buceros rhinoceros Brh_R008822 I 0.649
Cmyd_10010793 Chelonia mydas Cmyd_10010793 I 0.649
ENSBTAP00000051506-D7 Bos grunniens ENSBTAP00000051506-D7 I 0.649
ENSMMUP00000017694 Macaca fascicularis ENSMMUP00000017694 I 0.649
ENSP00000249501-D1 Bos grunniens ENSP00000249501-D1 I 0.649
ENSP00000249501 Macaca fascicularis ENSP00000249501 I 0.649
Gfo_R001380 Geospiza fortis Gfo_R001380 I 0.649
Myotis_brandtii_HOXA10_10034030 Myotis brandtii Myotis_brandtii_HOXA10_10034030 I 0.649
Myotis_brandtii_HOXD10_10034998 Myotis brandtii Myotis_brandtii_HOXD10_10034998 I 0.649
Pvit_11711 Pogona vitticeps Pvit_11711 I 0.649
hoxd10 Xenopus tropicalis XB-GENE-485204 I 0.649
hoxd10.L Xenopus laevis XB-GENE-485208 I 0.649
ENSACAG00000010840 Anolis carolinensis ENSACAG00000010840 I 0.646
ENSAMEG00000000665 Ailuropoda melanoleuca ENSAMEG00000000665 I 0.646
ENSAMXG00000006895 Astyanax mexicanus ENSAMXG00000006895 I 0.646
ENSAMXG00000009358 Astyanax mexicanus ENSAMXG00000009358 I 0.646
ENSAMXG00000024684 Astyanax mexicanus ENSAMXG00000024684 I 0.646
ENSAPLG00000007306 Anas platyrhynchos ENSAPLG00000007306 I 0.646
HOXC12 Bos taurus ENSBTAG00000000924 I 0.646
HOXC12 Canis familiaris ENSCAFG00000006645 I 0.646
HOXC12 Callithrix jacchus ENSCJAG00000018806 I 0.646
HOXC12 Cavia porcellus ENSCPOG00000026314 I 0.646
ENSCSAG00000005459 Chlorocebus sabaeus ENSCSAG00000005459 I 0.646
hoxd12a Danio rerio ENSDARG00000059263 I 0.646
hoxc12a Danio rerio ENSDARG00000070352 I 0.646
hoxc12b Danio rerio ENSDARG00000103133 I 0.646
HOXC12 Equus caballus ENSECAG00000024893 I 0.646
HOXC12 Felis catus ENSFCAG00000023389 I 0.646
HOXC12 Homo sapiens ENSG00000123407 D 0.646
hoxd12a Gasterosteus aculeatus ENSGACG00000004574 I 0.646
ENSGALG00000026393 Gallus gallus ENSGALG00000026393 I 0.646
HOXC12 Gorilla gorilla ENSGGOG00000023684 I 0.646
ENSGMOG00000004313 Gadus morhua ENSGMOG00000004313 I 0.646
ENSLACG00000016761 Latimeria chalumnae ENSLACG00000016761 I 0.646