MhA1_Contig2487.frz3.gene2 (Meloidogyne hapla)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MhA1_Contig2487.frz3.gene2 T235137_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.758 0.372
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.758 0.372
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.758 0.372
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.693 0.372
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.693 0.372
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.693 0.372
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.693 0.372
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.693 0.372
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.693 0.372
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.693 0.372
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.693 0.372
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.693 0.372
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig2487.frz3.gene2 Homeodomain 134 176

Links

Other Homeodomain family TFs
Other Meloidogyne hapla TFs

1230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB02848.1 Alternaria brassicicola AB02848.1 I 0.000
BAUCODRAFT_113280 Baudoinia compniacensis BAUCODRAFT_113280 I 0.000
BBA_00050 Beauveria bassiana BBA_00050 I 0.000
Bcin15g01900 Botrytis cinerea Bcin15g01900 I 0.000
ACLA_035940 Aspergillus clavatus CADACLAG00003762 I 0.000
AFUA_3G08010 Aspergillus fumigatus CADAFUAG00005137 I 0.000
NFIA_069130 Neosartorya fischeri CADNFIAG00006258 I 0.000
CFIO01_12627 Colletotrichum fioriniae CFIO01_12627 I 0.000
CH063_12017 Colletotrichum higginsianum CH063_12017 I 0.000
CHGG_00776 Chaetomium globosum CHGG_00776 I 0.000
CIMG_02350 Coccidioides immitis CIMG_02350 I 0.000
CMQ_2957 Grosmannia clavigera CMQ_2957 I 0.000
Cob_12302 Colletotrichum orbiculare Cob_12302 I 0.000
COCC4DRAFT_132281 Bipolaris maydis COCC4DRAFT_132281 I 0.000
COCCADRAFT_34587 Bipolaris zeicola COCCADRAFT_34587 I 0.000
COCMIDRAFT_89546 Bipolaris oryzae COCMIDRAFT_89546 I 0.000
COCSADRAFT_161815 Bipolaris sorokiniana COCSADRAFT_161815 I 0.000
COCVIDRAFT_94495 Bipolaris victoriae COCVIDRAFT_94495 I 0.000
CPC735_039930 Coccidioides posadasii CPC735_039930 I 0.000
CSUB01_02419 Colletotrichum sublineola CSUB01_02419 I 0.000
CTHT_0059610 Chaetomium thermophilum CTHT_0059610 I 0.000
DOTSEDRAFT_40082 Dothistroma septosporum DOTSEDRAFT_40082 I 0.000
estExt_fgenesh1_pg.C_chr_11362 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_11362 I 0.000
estExt_Genewise1.C_sca_1_chr1_3_00506 Nectria haematococca estExt_Genewise1.C_sca_1_chr1_3_00506 I 0.000
estExt_Genewise1Plus.C_40603 Cryphonectria parasitica estExt_Genewise1Plus.C_40603 I 0.000
EURHEDRAFT_374243 Aspergillus ruber EURHEDRAFT_374243 I 0.000
e_gw1.7.723.1 Neurospora discreta e_gw1.7.723.1 I 0.000
F503_00580 Ophiostoma piceae uamh F503_00580 I 0.000
FFUJ_01127 Fusarium fujikuroi FFUJ_01127 I 0.000
fgenesh1_pg.C_scaffold_1001214 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1001214 I 0.000
fgenesh1_pg.C_scaffold_3000316 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_3000316 I 0.000
FGRRES_15757 Fusarium graminearum FGRRES_15757 I 0.000
FOXG_00444 Fusarium oxysporum FOXG_00444 I 0.000
FPSE_04598 Fusarium pseudograminearum FPSE_04598 I 0.000
FVEG_01067 Fusarium verticillioides FVEG_01067 I 0.000
GGTG_10245 Gaeumannomyces graminis GGTG_10245 I 0.000
GLRG_04524 Colletotrichum graminicola GLRG_04524 I 0.000
HCBG_06660 Histoplasma capsulatum HCBG_06660 I 0.000
HMPREF1624_01125 Sporothrix schenckii HMPREF1624_01125 I 0.000
LEMA_P025640.1 Leptosphaeria maculans LEMA_P025640.1 I 0.000
M7I_4857 Glarea lozoyensis M7I_4857 I 0.000
MAC_03065 Metarhizium acridum MAC_03065 I 0.000
MAJ_00678 Metarhizium majus MAJ_00678 I 0.000
MANI_112562 Metarhizium anisopliae MANI_112562 I 0.000
MAPG_03212 Magnaporthe poae MAPG_03212 I 0.000
MBM_02240 Marssonina brunnea MBM_02240 I 0.000
MBR_03431 Metarhizium brunneum MBR_03431 I 0.000
MGU_02765 Metarhizium guizhouense MGU_02765 I 0.000
MYCFIDRAFT_213472 Pseudocercospora fijiensis MYCFIDRAFT_213472 I 0.000
Mycgr3G107598 Zymoseptoria tritici Mycgr3G107598 I 0.000
NCU09333 Neurospora crassa NCU09333 D 0.000
NechaG57385 Fusarium solani NechaG57385 I 0.000
NEUTE1DRAFT_105772 Neurospora tetrasperma NEUTE1DRAFT_105772 I 0.000
OCS_03657 Ophiocordyceps sinensis OCS_03657 I 0.000
OIDMADRAFT_127716 Oidiodendron maius OIDMADRAFT_127716 I 0.000
PAAG_01715 Paracoccidioides sp lutzii PAAG_01715 I 0.000
PABG_03764 Paracoccidioides brasiliensis PABG_03764 I 0.000
PEX1_057980 Penicillium expansum PEX1_057980 I 0.000
PFICI_01390 Pestalotiopsis fici PFICI_01390 I 0.000
PTRG_07931 Pyrenophora triticirepentis PTRG_07931 I 0.000
PTT_11966 Pyrenophora teres PTT_11966 I 0.000
PVAR5_5909 Byssochlamys spectabilis PVAR5_5909 I 0.000
S40285_03272 Stachybotrys chlorohalonata S40285_03272 I 0.000
S40288_01364 Stachybotrys chartarum S40288_01364 I 0.000
SAPIO_CDS8963 Scedosporium apiospermum SAPIO_CDS8963 I 0.000
SBOR_5885 Sclerotinia borealis SBOR_5885 I 0.000
SEPMUDRAFT_146274 Sphaerulina musiva SEPMUDRAFT_146274 I 0.000
SETTUDRAFT_160143 Setosphaeria turcica SETTUDRAFT_160143 I 0.000
SMAC_08482 Sordaria macrospora SMAC_08482 I 0.000
SNOG_15249 Stagonospora nodorum SNOG_15249 I 0.000
SNOG_15249 Phaeosphaeria nodorum SNOG_15249 I 0.000
SPBR_08152 Sporothrix brasiliensis SPBR_08152 I 0.000
THITE_2113340 Thielavia terrestris THITE_2113340 I 0.000
TRIATDRAFT_83090 Trichoderma atroviride TRIATDRAFT_83090 I 0.000
TRIREDRAFT_75418 Trichoderma reesei TRIREDRAFT_75418 I 0.000
TRIVIDRAFT_88565 Trichoderma virens TRIVIDRAFT_88565 I 0.000
UCREL1_1716 Eutypa lata UCREL1_1716 I 0.000
UCRNP2_5297 Neofusicoccum parvum UCRNP2_5297 I 0.000
UCRPA7_7219 Togninia minima UCRPA7_7219 I 0.000
VDAG_03150 Verticillium dahliae VDAG_03150 I 0.000
VDBG_05992 Verticillium alfalfae VDBG_05992 I 0.000
VDBG_05992 Verticillium albo atrum VDBG_05992 I 0.000
VHEMI03893 Torrubiella hemipterigena VHEMI03893 I 0.000
X797_003933 Metarhizium robertsii X797_003933 I 0.000