CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.C_scaffold_3000316
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.C_scaffold_3000316
T139004_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU09333
M01892_2.00
Neurospora crassa
NNNNGCCTDN
NHAGGCNNNN
PBM
Weirauch et al.(2014)
pTH8940
0.767
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_3000316
C2H2 ZF
574
596
HACRDCNKEFKRPCDLTKHEKTH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_132281
Bipolaris maydis
COCC4DRAFT_132281
I
0.827
COCCADRAFT_34587
Bipolaris zeicola
COCCADRAFT_34587
I
0.827
COCMIDRAFT_89546
Bipolaris oryzae
COCMIDRAFT_89546
I
0.827
COCSADRAFT_161815
Bipolaris sorokiniana
COCSADRAFT_161815
I
0.827
COCVIDRAFT_94495
Bipolaris victoriae
COCVIDRAFT_94495
I
0.827
SNOG_15249
Stagonospora nodorum
SNOG_15249
I
0.779
LEMA_P025640.1
Leptosphaeria maculans
LEMA_P025640.1
I
0.779
PTRG_07931
Pyrenophora triticirepentis
PTRG_07931
I
0.779
PTT_11966
Pyrenophora teres
PTT_11966
I
0.779
SETTUDRAFT_160143
Setosphaeria turcica
SETTUDRAFT_160143
I
0.779
SNOG_15249
Phaeosphaeria nodorum
SNOG_15249
I
0.779
AB02848.1
Alternaria brassicicola
AB02848.1
I
0.779
ACLA_035940
Aspergillus clavatus
CADACLAG00003762
I
0.769
AFUA_3G08010
Aspergillus fumigatus
CADAFUAG00005137
I
0.769
NFIA_069130
Neosartorya fischeri
CADNFIAG00006258
I
0.769
HCBG_06660
Histoplasma capsulatum
HCBG_06660
I
0.769
PAAG_01715
Paracoccidioides sp lutzii
PAAG_01715
I
0.769
PABG_03764
Paracoccidioides brasiliensis
PABG_03764
I
0.769
PEX1_057980
Penicillium expansum
PEX1_057980
I
0.769
PVAR5_5909
Byssochlamys spectabilis
PVAR5_5909
I
0.769
UCRNP2_5297
Neofusicoccum parvum
UCRNP2_5297
I
0.769
VDBG_05992
Verticillium albo atrum
VDBG_05992
I
0.767
BBA_00050
Beauveria bassiana
BBA_00050
I
0.767
Bcin15g01900
Botrytis cinerea
Bcin15g01900
I
0.767
CFIO01_12627
Colletotrichum fioriniae
CFIO01_12627
I
0.767
CH063_12017
Colletotrichum higginsianum
CH063_12017
I
0.767
CHGG_00776
Chaetomium globosum
CHGG_00776
I
0.767
Cob_12302
Colletotrichum orbiculare
Cob_12302
I
0.767
CSUB01_02419
Colletotrichum sublineola
CSUB01_02419
I
0.767
CTHT_0059610
Chaetomium thermophilum
CTHT_0059610
I
0.767
FFUJ_01127
Fusarium fujikuroi
FFUJ_01127
I
0.767
FGRRES_15757
Fusarium graminearum
FGRRES_15757
I
0.767
FOXG_00444
Fusarium oxysporum
FOXG_00444
I
0.767
FPSE_04598
Fusarium pseudograminearum
FPSE_04598
I
0.767
FVEG_01067
Fusarium verticillioides
FVEG_01067
I
0.767
GGTG_10245
Gaeumannomyces graminis
GGTG_10245
I
0.767
GLRG_04524
Colletotrichum graminicola
GLRG_04524
I
0.767
M7I_4857
Glarea lozoyensis
M7I_4857
I
0.767
MAC_03065
Metarhizium acridum
MAC_03065
I
0.767
MAJ_00678
Metarhizium majus
MAJ_00678
I
0.767
MANI_112562
Metarhizium anisopliae
MANI_112562
I
0.767
MAPG_03212
Magnaporthe poae
MAPG_03212
I
0.767
MBM_02240
Marssonina brunnea
MBM_02240
I
0.767
MBR_03431
Metarhizium brunneum
MBR_03431
I
0.767
MGG_04428
Magnaporthe oryzae
MGG_04428
I
0.767
MGU_02765
Metarhizium guizhouense
MGU_02765
I
0.767
NechaG57385
Fusarium solani
NechaG57385
I
0.767
NEUTE1DRAFT_105772
Neurospora tetrasperma
NEUTE1DRAFT_105772
I
0.767
OCS_03657
Ophiocordyceps sinensis
OCS_03657
I
0.767
OIDMADRAFT_127716
Oidiodendron maius
OIDMADRAFT_127716
I
0.767
S40285_03272
Stachybotrys chlorohalonata
S40285_03272
I
0.767
S40288_01364
Stachybotrys chartarum
S40288_01364
I
0.767
SAPIO_CDS8963
Scedosporium apiospermum
SAPIO_CDS8963
I
0.767
SBOR_5885
Sclerotinia borealis
SBOR_5885
I
0.767
SMAC_08482
Sordaria macrospora
SMAC_08482
I
0.767
THITE_2113340
Thielavia terrestris
THITE_2113340
I
0.767
TRIATDRAFT_83090
Trichoderma atroviride
TRIATDRAFT_83090
I
0.767
TRIREDRAFT_75418
Trichoderma reesei
TRIREDRAFT_75418
I
0.767
TRIVIDRAFT_88565
Trichoderma virens
TRIVIDRAFT_88565
I
0.767
UCRPA7_7219
Togninia minima
UCRPA7_7219
I
0.767
VDAG_03150
Verticillium dahliae
VDAG_03150
I
0.767
VDBG_05992
Verticillium alfalfae
VDBG_05992
I
0.767
VHEMI03893
Torrubiella hemipterigena
VHEMI03893
I
0.767
X797_003933
Metarhizium robertsii
X797_003933
I
0.767
e_gw1.7.723.1
Neurospora discreta
e_gw1.7.723.1
I
0.767
estExt_Genewise1.C_sca_1_chr1_3_00506
Nectria haematococca
estExt_Genewise1.C_sca_1_chr1_3_00506
I
0.767
NCU09333
Neurospora crassa
NCU09333
D
0.767
estExt_Genewise1Plus.C_40603
Cryphonectria parasitica
estExt_Genewise1Plus.C_40603
I
0.767
CIMG_02350
Coccidioides immitis
CIMG_02350
I
0.757
BAUCODRAFT_113280
Baudoinia compniacensis
BAUCODRAFT_113280
I
0.757
CMQ_2957
Grosmannia clavigera
CMQ_2957
I
0.757
CPC735_039930
Coccidioides posadasii
CPC735_039930
I
0.757
DOTSEDRAFT_40082
Dothistroma septosporum
DOTSEDRAFT_40082
I
0.757
EURHEDRAFT_374243
Aspergillus ruber
EURHEDRAFT_374243
I
0.757
F503_00580
Ophiostoma piceae uamh
F503_00580
I
0.757
HMPREF1624_01125
Sporothrix schenckii
HMPREF1624_01125
I
0.757
MYCFIDRAFT_213472
Pseudocercospora fijiensis
MYCFIDRAFT_213472
I
0.757
Mycgr3G107598
Zymoseptoria tritici
Mycgr3G107598
I
0.757
PFICI_01390
Pestalotiopsis fici
PFICI_01390
I
0.757
SEPMUDRAFT_146274
Sphaerulina musiva
SEPMUDRAFT_146274
I
0.757
SPBR_08152
Sporothrix brasiliensis
SPBR_08152
I
0.757
UCREL1_1716
Eutypa lata
UCREL1_1716
I
0.757
estExt_fgenesh1_pg.C_chr_11362
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_11362
I
0.757
fgenesh1_pg.C_scaffold_1001214
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1001214
I
0.757