CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig354.frz3.gene60
(
Meloidogyne hapla
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
MhA1_Contig354.frz3.gene60
T235151_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig354.frz3.gene60
Homeodomain
196
259
TRFSPLSEMPRLERWFRSDSNPSRQKLISYMNILNSSPYRRVNNKVTYQQICNWFANQRRTIQR
MhA1_Contig354.frz3.gene60
Homeodomain
562
629
SRSRLMFDPLSELPILERWFDDNPHPGWLQIEQFTDYLNSMNYRQNYPPISTHNVKIWFKNRRAKTKR
Links
Other
Homeodomain
family TFs
Other
Meloidogyne hapla
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000490701
Angiostrongylus cantonensis
ACAC_0000490701
N
0.674
ACOC_0001036301
Angiostrongylus costaricensis
ACOC_0001036301
N
0.674
Bm7640
Brugia malayi
Bm7640
N
0.636
DICVIV_09532
Dictyocaulus viviparus
DICVIV_09532
N
0.702
EEL_0000412901
Elaeophora elaphi
EEL_0000412901
N
0.642
GPLIN_001334700
Globodera pallida
GPLIN_001334700
N
0.787
Hba_21527
Heterorhabditis bacteriophora
Hba_21527
N
0.628
HCOI00637900
Haemonchus contortus
HCOI00637900
N
0.663
HPBE_0001810001
Heligmosomoides bakeri
HPBE_0001810001
N
0.630
HPLM_0001532901
Haemonchus placei
HPLM_0001532901
N
0.663
LOAG_03092
Loa loa
LOAG_03092
N
0.606
Minc03019
Meloidogyne incognita
Minc03019
N
0.846
nAv.1.0.1.g04870
Acanthocheilonema viteae
nAv.1.0.1.g04870
N
0.636
nDi.2.2.2.g01589
Dirofilaria immitis
nDi.2.2.2.g01589
N
0.636
NECAME_03333
Necator americanus
NECAME_03333
N
0.660
nOo.2.0.1.g00722
Onchocerca ochengi
nOo.2.0.1.g00722
N
0.636
scaffold1322-EXSNAP2012.4
Pristionchus exspectatus
scaffold1322-EXSNAP2012.4
N
0.688
TCLT_0000625901
Thelazia callipaeda
TCLT_0000625901
N
0.645
WBGene00239750
Onchocerca volvulus
WBGene00239750
N
0.636
WUBG_04888
Wuchereria bancrofti
WUBG_04888
N
0.636