CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold1322-EXSNAP2012.4
(
Pristionchus exspectatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
scaffold1322-EXSNAP2012.4
T235941_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold1322-EXSNAP2012.4
Homeodomain
25
84
QLFEMPKLERWFKTDPSPNRQKLLQYMNQLNAGSCRQNQPKISYHQLCNWFANQRSTSRA
scaffold1322-EXSNAP2012.4
Homeodomain
216
283
SRSRLMFDPLTELPVLEKWFEENPHPTWMQIDDYTNQLNSREYRDNYPHISTHNVKIWFKNRRAKCKR
Links
Other
Homeodomain
family TFs
Other
Pristionchus exspectatus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPBE_0001810001
Heligmosomoides bakeri
HPBE_0001810001
N
0.718
Hba_21527
Heterorhabditis bacteriophora
Hba_21527
N
0.717
WUBG_04888
Wuchereria bancrofti
WUBG_04888
N
0.716
Bm7640
Brugia malayi
Bm7640
N
0.716
nAv.1.0.1.g04870
Acanthocheilonema viteae
nAv.1.0.1.g04870
N
0.716
WBGene00239750
Onchocerca volvulus
WBGene00239750
N
0.714
nOo.2.0.1.g00722
Onchocerca ochengi
nOo.2.0.1.g00722
N
0.714
nDi.2.2.2.g01589
Dirofilaria immitis
nDi.2.2.2.g01589
N
0.712
EEL_0000412901
Elaeophora elaphi
EEL_0000412901
N
0.708
TCLT_0000625901
Thelazia callipaeda
TCLT_0000625901
N
0.706
MhA1_Contig354.frz3.gene60
Meloidogyne hapla
MhA1_Contig354.frz3.gene60
N
0.688
LOAG_03092
Loa loa
LOAG_03092
N
0.684
Minc03019
Meloidogyne incognita
Minc03019
N
0.680
ANCDUO_06311
Ancylostoma duodenale
ANCDUO_06311
N
0.664
Bm10163
Brugia malayi
Bm10163
N
0.639
GPLIN_001334700
Globodera pallida
GPLIN_001334700
N
0.628
ASU_05009
Ascaris suum
ASU_05009
N
0.625
DICVIV_09532
Dictyocaulus viviparus
DICVIV_09532
N
0.625
L596_g9224
Steinernema carpocapsae
L596_g9224
N
0.619
L898_g34810
Steinernema monticolum
L898_g34810
N
0.606
HCOI00637900
Haemonchus contortus
HCOI00637900
N
0.604
HPLM_0001532901
Haemonchus placei
HPLM_0001532901
N
0.604
L889_g25145
Steinernema feltiae
L889_g25145
N
0.599