CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g34810
(
Steinernema monticolum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
L898_g34810
T234987_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g34810.t1
Homeodomain
180
241
FNAIHEIPKLERWFQSEPNPSRQKLIFYMSTLNQTSYRKSHPKITYQQICNWFNNQRASNRT
L898_g34810.t1
Homeodomain
405
472
ARSRLMFDPLSELPILEKWFEENPHPSWIQIDQYTETLNGCQYRQSYPPISTHNVKIWFKNRRAKCKR
L898_g34810.t2
Homeodomain
355
416
FNAIHEIPKLERWFQSEPNPSRQKLIFYMSTLNQTSYRKSHPKITYQQICNWFNNQRASNRT
L898_g34810.t2
Homeodomain
580
647
ARSRLMFDPLSELPILEKWFEENPHPSWIQIDQYTETLNGCQYRQSYPPISTHNVKIWFKNRRAKCKR
Links
Other
Homeodomain
family TFs
Other
Steinernema monticolum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g25145
Steinernema feltiae
L889_g25145
N
0.742
L892_g9710
Steinernema scapterisci
L892_g9710
N
0.726
Hba_21527
Heterorhabditis bacteriophora
Hba_21527
N
0.708
L596_g9224
Steinernema carpocapsae
L596_g9224
N
0.706
WBGene00239750
Onchocerca volvulus
WBGene00239750
N
0.684
nAv.1.0.1.g04870
Acanthocheilonema viteae
nAv.1.0.1.g04870
N
0.684
nOo.2.0.1.g00722
Onchocerca ochengi
nOo.2.0.1.g00722
N
0.684
nDi.2.2.2.g01589
Dirofilaria immitis
nDi.2.2.2.g01589
N
0.682
EEL_0000412901
Elaeophora elaphi
EEL_0000412901
N
0.678
SMUV_0000944701
Syphacia muris
SMUV_0000944701
N
0.676
HPBE_0001810001
Heligmosomoides bakeri
HPBE_0001810001
N
0.675
PTRK_0000043500
Parastrongyloides trichosuri
PTRK_0000043500
N
0.673
TCLT_0000625901
Thelazia callipaeda
TCLT_0000625901
N
0.672
BXY_0855500
Bursaphelenchus xylophilus
BXY_0855500
N
0.669
ASU_05009
Ascaris suum
ASU_05009
N
0.665
WUBG_04888
Wuchereria bancrofti
WUBG_04888
N
0.662
Bm7640
Brugia malayi
Bm7640
N
0.662
EVEC_0001166801
Enterobius vermicularis
EVEC_0001166801
N
0.653
SSTP_0001191000
Strongyloides stercoralis
SSTP_0001191000
N
0.643
SPAL_0000744000
Strongyloides papillosus
SPAL_0000744000
N
0.636
SVE_1021200
Strongyloides venezuelensis
SVE_1021200
N
0.636
LOAG_03092
Loa loa
LOAG_03092
N
0.630
RSKR_0001108600
Rhabditophanes kr3021
RSKR_0001108600
N
0.629
ANCDUO_06311
Ancylostoma duodenale
ANCDUO_06311
N
0.628
scaffold1322-EXSNAP2012.4
Pristionchus exspectatus
scaffold1322-EXSNAP2012.4
N
0.606