CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000303300
(
Parastrongyloides trichosuri
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PTRK_0000303300
T235713_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Abd-B
M00554_2.00
Drosophila melanogaster
NWTWAYDDNN
NNHHRTWAWN
PBM
Busser et al.(2012a)
Abd-B
0.780
0.772
Abd-B
M03772_2.00
Drosophila melanogaster
DRTCRTAAAWH
DWTTTAYGAYH
SELEX
Nitta et al.(2015)
Abd-B_1
0.780
0.772
Abd-B
M03773_2.00
Drosophila melanogaster
DTTTTATKRCY
RGYMATAAAAH
SELEX
Nitta et al.(2015)
Abd-B_2
0.780
0.772
Abd-B
M03774_2.00
Drosophila melanogaster
NKCARYAACGACYW
WRGTCGTTRYTGMN
SELEX
Nitta et al.(2015)
Abd-B_3
0.780
0.772
Abd-B
M03775_2.00
Drosophila melanogaster
DTTTWATGKSTTTY
RAAASMCATWAAAH
SELEX
Nitta et al.(2015)
Abd-B_4
0.780
0.772
Abd-B
M06476_2.00
Drosophila melanogaster
TTTATKR
YMATAAA
B1H
Mathelier et al.(2014)
MA0165.1
0.780
0.772
Abd-B
M06211_2.00
Drosophila melanogaster
YCATAAAA
TTTTATGR
B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015
0.780
0.772
Abd-B
M09672_2.00
Drosophila melanogaster
YMATAAAAHH
DDTTTTATKR
Misc
Kulakovskiy et al.(2009)
Abd-B
0.780
0.772
Abd-B
M10779_2.00
Drosophila melanogaster
VSNTTDATKRCNNN
NNNGYMATHAANSB
Transfac
Matys et al.(2006)
I$ABDB_01
0.780
0.772
Abd-B
M10780_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDB_Q6
0.780
0.772
Hoxd12_CONSTRUCT
M00538_2.00
PBM CONSTRUCTS
NWTWAYNDBN
NVHNRTWAWN
PBM
Berger et al.(2008)
Hoxd12_3481
0.757
0.614
HOXD12
M03206_2.00
Homo sapiens
SYAATAAAA
TTTTATTRS
SELEX
Jolma et al.(2013)
HOXD12_1
0.757
0.614
HOXD12
M03207_2.00
Homo sapiens
RVTCGTAAAAH
DTTTTACGABY
SELEX
Jolma et al.(2013)
HOXD12_2
0.757
0.614
HOXD12
M03208_2.00
Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN
SELEX
Jolma et al.(2013)
HOXD12_3
0.757
0.614
HOXD12
M03209_2.00
Homo sapiens
DTTWATYRC
GYRATWAAH
SELEX
Jolma et al.(2013)
HOXD12_4
0.757
0.614
HOXD12
M05279_2.00
Homo sapiens
NKTWACGAYN
NRTCGTWAMN
SELEX
Yin et al.(2017)
HOXD12_eDBD_HT-SELEX
0.757
0.614
HOXD12
M05280_2.00
Homo sapiens
NRTCGTAAAH
DTTTACGAYN
SELEX
Yin et al.(2017)
HOXD12_eDBD_Methyl-HT-SELEX
0.757
0.614
HXD12_HETFR
M02196_2.00
Heterodontus francisci
TTWATKRC
GYMATWAA
PBM
Weirauch et al.(2014)
pTH6533
0.724
0.596
Hoxc12
M00508_2.00
Mus musculus
NDTWAYNDBN
NVHNRTWAHN
PBM
Berger et al.(2008)
Hoxc12_3480
0.712
0.544
HOXC12
M03135_2.00
Homo sapiens
TTTTATTRY
RYAATAAAA
SELEX
Jolma et al.(2013)
HOXC12_1
0.712
0.544
HOXC12
M03136_2.00
Homo sapiens
RRTCGTAAAAH
DTTTTACGAYY
SELEX
Jolma et al.(2013)
HOXC12_2
0.712
0.544
HOXC12
M05083_2.00
Homo sapiens
NGYAATAAAAN
NTTTTATTRCN
SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_1
0.712
0.544
HOXC12
M05084_2.00
Homo sapiens
VRTCGTAAAHN
NDTTTACGAYB
SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_2
0.712
0.544
HOXC12
M05085_2.00
Homo sapiens
NGYAATAAAAH
DTTTTATTRCN
SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_1
0.712
0.544
HOXC12
M05086_2.00
Homo sapiens
NRTCGTAAAHH
DDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_2
0.712
0.544
Hoxa11
M00474_2.00
Mus musculus
NNHNHNNNN
NNNNDNDNN
PBM
Berger et al.(2008)
Hoxa11_2218
0.677
0.737
Hoxa11
M03274_2.00
Mus musculus
NNDTTWAYGABN
NVTCRTWAAHNN
SELEX
Jolma et al.(2013)
Hoxa11_1
0.677
0.737
Hoxa11
M03275_2.00
Mus musculus
NDTTWATKRNN
NNYMATWAAHN
SELEX
Jolma et al.(2013)
Hoxa11_2
0.677
0.737
HOXA11
M04897_2.00
Homo sapiens
VGTCGTAAAWH
DWTTTACGACB
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1
0.677
0.737
HOXA11
M04898_2.00
Homo sapiens
DDTTWATKRSN
NSYMATWAAHH
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2
0.677
0.737
HOXA11
M04899_2.00
Homo sapiens
NRTCGTAAAWH
DWTTTACGAYN
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1
0.677
0.737
HOXA11
M04900_2.00
Homo sapiens
DYTTTATKRCH
DGYMATAAARH
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2
0.677
0.737
Hoxd11
M00493_2.00
Mus musculus
DDDNNNNN
NNNNNHHH
PBM
Berger et al.(2008)
Hoxd11_3873
0.677
0.719
HOXD11
M03139_2.00
Homo sapiens
RTCGTAAAWH
DWTTTACGAY
SELEX
Jolma et al.(2013)
HOXD11_1
0.677
0.719
HOXD11
M03140_2.00
Homo sapiens
TTTWATKRBH
DVYMATWAAA
SELEX
Jolma et al.(2013)
HOXD11_2
0.677
0.719
HOXD11
M05120_2.00
Homo sapiens
NRTCGTWAANNDTWAH
DTWAHNNTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX
0.677
0.719
HOXD11
M05121_2.00
Homo sapiens
NRTCGTWAAHNDTWAH
DTWAHNDTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX
0.677
0.719
Hoxc11
M00390_2.00
Mus musculus
NTTWAYDDBN
NVHHRTWAAN
PBM
Berger et al.(2008)
Hoxc11_3718
0.677
0.684
HOXC11
M03131_2.00
Homo sapiens
NWTTWAYGAYH
DRTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC11_1
0.677
0.684
HOXC11
M03132_2.00
Homo sapiens
NWTTWATKRBH
DVYMATWAAWN
SELEX
Jolma et al.(2013)
HOXC11_2
0.677
0.684
HOXC11
M03133_2.00
Homo sapiens
DRTCGTWAAWN
NWTTWACGAYH
SELEX
Jolma et al.(2013)
HOXC11_3
0.677
0.684
HOXC11
M03134_2.00
Homo sapiens
NTTTTATKRBN
NVYMATAAAAN
SELEX
Jolma et al.(2013)
HOXC11_4
0.677
0.684
HOXC11
M05075_2.00
Homo sapiens
NDTTWACGAYN
NRTCGTWAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1
0.677
0.684
HOXC11
M05076_2.00
Homo sapiens
NWTTWATKRCH
DGYMATWAAWN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2
0.677
0.684
HOXC11
M05079_2.00
Homo sapiens
NRTCGTWAAHN
NDTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1
0.677
0.684
HOXC11
M05080_2.00
Homo sapiens
NDTTWATKRSN
NSYMATWAAHN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2
0.677
0.684
HOXC11
M05077_2.00
Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1
0.677
0.684
HOXC11
M05078_2.00
Homo sapiens
NDTTTATKRSN
NSYMATAAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2
0.677
0.684
HOXC11
M05081_2.00
Homo sapiens
NRTCGTWAANN
NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1
0.677
0.684
HOXC11
M05082_2.00
Homo sapiens
NNTTWAYKRSN
NSYMRTWAANN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2
0.677
0.684
Q9U9Y9_LINUN
M02218_2.00
Lingula unguis
NNTAATWAATN
NATTWATTANN
PBM
Weirauch et al.(2014)
pTH5504
0.662
0.544
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN
NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.638
0.561
Hoxd9
M03282_2.00
Mus musculus
TTTWATKKB
VMMATWAAA
SELEX
Jolma et al.(2013)
Hoxd9_1
0.625
0.684
Hoxd9
M03283_2.00
Mus musculus
DWTTWATKRY
RYMATWAAWH
SELEX
Jolma et al.(2013)
Hoxd9_2
0.625
0.684
Hoxd9
M03284_2.00
Mus musculus
DTTWAYGRB
VYCRTWAAH
SELEX
Jolma et al.(2013)
Hoxd9_3
0.625
0.684
HOXC9
M05331_2.00
Homo sapiens
GTCGTAAAAN
NTTTTACGAC
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
0.625
0.684
HOXC9
M05332_2.00
Homo sapiens
NTTTTATKRC
GYMATAAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
0.625
0.684
HOXD9
M05104_2.00
Homo sapiens
NTTTTATKRC
GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
0.625
0.684
HOXD9
M05105_2.00
Homo sapiens
RTCRTAAAWN
NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
0.625
0.684
HOXD9
M05108_2.00
Homo sapiens
RTCGTAAAWN
NWTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
0.625
0.684
HOXD9
M05109_2.00
Homo sapiens
NTTTTATKRC
GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
0.625
0.684
HOXC9
M09161_2.00
Homo sapiens
HTTWATKGCH
DGCMATWAAD
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
0.625
0.684
HOXD9
M10686_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD9_Q2
0.625
0.684
HOXC9
M05333_2.00
Homo sapiens
RTCGTAAAHN
NDTTTACGAY
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
0.625
0.684
HOXC9
M05334_2.00
Homo sapiens
NTTTWATKRC
GYMATWAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
0.625
0.684
HOXD9
M05106_2.00
Homo sapiens
NNTTWATKRC
GYMATWAANN
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
0.625
0.684
HOXD9
M05107_2.00
Homo sapiens
RTCGTAAANN
NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
0.625
0.684
HOXD9
M05110_2.00
Homo sapiens
RTCGTAAANN
NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
0.625
0.684
HOXD9
M05111_2.00
Homo sapiens
NDTTWATKRC
GYMATWAAHN
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
0.625
0.684
Hoxb9
M00410_2.00
Mus musculus
NTTWAYDDNN
NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb9_3413
0.625
0.667
Hoxa9
M00475_2.00
Mus musculus
NNDDBNNN
NNNVHHNN
PBM
Berger et al.(2008)
Hoxa9_2622
0.625
0.667
HOXA9
M03085_2.00
Homo sapiens
NNDTTWAYGAYN
NRTCRTWAAHNN
SELEX
Jolma et al.(2013)
HOXA10_1
0.625
0.667
HOXA9
M03086_2.00
Homo sapiens
NDTTWATKRYN
NRYMATWAAHN
SELEX
Jolma et al.(2013)
HOXA10_2
0.625
0.667
HOXA9
M04932_2.00
Homo sapiens
NNDWWABKRC
GYMVTWWHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
0.625
0.667
HOXA9
M04933_2.00
Homo sapiens
NNDTWAYGRB
VYCRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
0.625
0.667
HOXB9
M05289_2.00
Homo sapiens
RTCRTAAAWN
NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
0.625
0.667
HOXB9
M05290_2.00
Homo sapiens
NTTTWATKRC
GYMATWAAAN
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
0.625
0.667
Hoxa9
M08138_2.00
Mus musculus
TGATTKATKRB
VYMATMAATCA
ChIP-seq
Mathelier et al.(2014)
MA0594.1
0.625
0.667
HOXA9
M09130_2.00
Homo sapiens
DCATAAAYYRBH
DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
0.625
0.667
HOXA9
M09131_2.00
Homo sapiens
HHATAAATCAH
DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
0.625
0.667
Hoxa9
M09203_2.00
Mus musculus
HHATAAATCAH
DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
0.625
0.667
Hoxa9
M09575_2.00
Mus musculus
WGATTKATDRBY
RVYHATMAATCW
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
0.625
0.667
HOXA9
M10642_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q6
0.625
0.667
HOXA9
M10643_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_04
0.625
0.667
HOXA9
M10644_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
0.625
0.667
HOXA9
M10645_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5
0.625
0.667
HOXB9
M05291_2.00
Homo sapiens
GTCGTAAAHB
VDTTTACGAC
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
0.625
0.667
HOXA9
M04934_2.00
Homo sapiens
NNDTWAYKRC
GYMRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
0.625
0.667
HOXA9
M04935_2.00
Homo sapiens
NNDTWACGAY
RTCGTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
0.625
0.667
Hoxc9
M00470_2.00
Mus musculus
NGTAATWAAN
NTTWATTACN
PBM
Berger et al.(2008)
Hoxc9_2367
0.617
0.667
Hoxc9
M08137_2.00
Mus musculus
NWGATTTATDGSH
DSCHATAAATCWN
ChIP-seq
Mathelier et al.(2014)
MA0485.1
0.617
0.667
Hoxc9
M09574_2.00
Mus musculus
TGATTTATDGCH
DGCHATAAATCA
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
0.617
0.667
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN
NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.604
0.561
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV
BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.604
0.561
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN
NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.604
0.561
Meox2
M03271_2.00
Mus musculus
NTAATKAN
NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.604
0.561
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB
VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.604
0.561
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV
BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.604
0.561
Meox2
M10771_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.604
0.561
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.604
0.561
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN
NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.604
0.561
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000303300.1
Homeodomain
300
356
RKKRKPYTKYQILELEKEYAFSSYVNKQKRVDLAQQLQLTERQVKIWFQNRRMKEKK
Links
Other
Homeodomain
family TFs
Other
Parastrongyloides trichosuri
TFs
810 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28200.m000189
Ricinus communis
28200.m000189
I
0.000
28623.m000400
Ricinus communis
28623.m000400
I
0.000
30147.m014211
Ricinus communis
30147.m014211
I
0.000
VND1
Arabidopsis lyrata
Al_scaffold_0003_3772
I
0.000
AMTR_s00011p00251570
Amborella trichopoda
AMTR_s00011p00251570
I
0.000
Aquca_006_00155
Aquilegia coerulea
Aquca_006_00155
I
0.000
Aquca_013_00692
Aquilegia coerulea
Aquca_013_00692
I
0.000
NAC007
Arabidopsis thaliana
AT1G12260
D
0.000
NAC037
Arabidopsis thaliana
AT2G18060
D
0.000
ANAC076
Arabidopsis thaliana
AT4G36160
D
0.000
BGIOSGA005950
Oryza indica
BGIOSGA005950
I
0.000
BGIOSGA011539
Oryza indica
BGIOSGA011539
I
0.000
BGIOSGA014649
Oryza indica
BGIOSGA014649
I
0.000
BGIOSGA022108
Oryza indica
BGIOSGA022108
I
0.000
BGIOSGA033343
Oryza indica
BGIOSGA033343
I
0.000
Bo1g005810
Brassica oleracea
Bo1g005810
I
0.000
Bo3g093950
Brassica oleracea
Bo3g093950
I
0.000
Bo5g017120
Brassica oleracea
Bo5g017120
I
0.000
Bo7g011640
Brassica oleracea
Bo7g011640
I
0.000
Bo7g117820
Brassica oleracea
Bo7g117820
I
0.000
Bo8g062650
Brassica oleracea
Bo8g062650
I
0.000
Bo8g108300
Brassica oleracea
Bo8g108300
I
0.000
Bostr.13671s0233
Boechera stricta
Bostr.13671s0233
I
0.000
Bostr.18351s0273
Boechera stricta
Bostr.18351s0273
I
0.000
Bostr.22157s0066
Boechera stricta
Bostr.22157s0066
I
0.000
Bostr.7867s1483
Boechera stricta
Bostr.7867s1483
I
0.000
Bra011667
Brassica rapa
Bra011667
I
0.000
Bra016783
Brassica rapa
Bra016783
I
0.000
Bra017750
Brassica rapa
Bra017750
I
0.000
Bra019750
Brassica rapa
Bra019750
I
0.000
Bra026981
Brassica rapa
Bra026981
I
0.000
Bra039915
Brassica rapa
Bra039915
I
0.000
BRADI1G52187
Brachypodium distachyon
BRADI1G52187
I
0.000
BRADI5G16917
Brachypodium distachyon
BRADI5G16917
N
0.000
BRADI5G27467
Brachypodium distachyon
BRADI5G27467
N
0.000
Cagra.0568s0135
Capsella grandiflora
Cagra.0568s0135
I
0.000
Cagra.1670s0031
Capsella grandiflora
Cagra.1670s0031
I
0.000
Cagra.4734s0006
Capsella grandiflora
Cagra.4734s0006
I
0.000
Carubv10004997m.g
Capsella rubella
Carubv10004997m.g
I
0.000
Carubv10009366m.g
Capsella rubella
Carubv10009366m.g
I
0.000
Carubv10022351m.g
Capsella rubella
Carubv10022351m.g
I
0.000
cassava24947.valid.m1
Manihot esculenta
cassava24947.valid.m1
I
0.000
cassava26615.m1
Manihot esculenta
cassava26615.m1
I
0.000
cassava46384.m1
Manihot esculenta
cassava46384.m1
I
0.000
cassava47039.m1
Manihot esculenta
cassava47039.m1
I
0.000
Ca_01981
Cicer arietinum
Ca_01981
I
0.000
Ca_02365
Cicer arietinum
Ca_02365
I
0.000
Ca_08693
Cicer arietinum
Ca_08693
I
0.000
Ciclev10006988m.g
Citrus clementina
Ciclev10006988m.g
I
0.000
Ciclev10024218m.g
Citrus clementina
Ciclev10024218m.g
I
0.000
Ciclev10026114m.g
Citrus clementina
Ciclev10026114m.g
I
0.000
Cla005768
Citrullus lanatus
Cla005768
I
0.000
Cla006372
Citrullus lanatus
Cla006372
I
0.000
Cla014492
Citrullus lanatus
Cla014492
I
0.000
Cucsa.043420
Cucumis sativus
Cucsa.043420
I
0.000
Cucsa.251620
Cucumis sativus
Cucsa.251620
I
0.000
Cucsa.302120
Cucumis sativus
Cucsa.302120
I
0.000
Cucsa.320590
Cucumis sativus
Cucsa.320590
I
0.000
estExt_gwp_gw1.C_2230002
Physcomitrella patens
estExt_gwp_gw1.C_2230002
N
0.000
Eucgr.A02887
Eucalyptus grandis
Eucgr.A02887
I
0.000
Eucgr.I02366
Eucalyptus grandis
Eucgr.I02366
I
0.000
evm.TU.supercontig_29.118
Carica papaya
evm.TU.supercontig_29.118
I
0.000
evm.TU.supercontig_3.311
Carica papaya
evm.TU.supercontig_3.311
I
0.000
evm.TU.supercontig_6.226
Carica papaya
evm.TU.supercontig_6.226
I
0.000
e_gw1.161.49.1
Physcomitrella patens
e_gw1.161.49.1
I
0.000
e_gw1.201.156.1
Physcomitrella patens
e_gw1.201.156.1
I
0.000
F775_07224
Aegilops tauschii
F775_07224
I
0.000
F775_08057
Aegilops tauschii
F775_08057
I
0.000
F775_20020
Aegilops tauschii
F775_20020
I
0.000
VND4
Arabidopsis lyrata
fgenesh2_kg.1__1330__AT1G12260.1
I
0.000
VND5
Arabidopsis lyrata
fgenesh2_kg.2__212__AT1G62700.1
I
0.000
ANAC076
Arabidopsis lyrata
fgenesh2_kg.7__450__AT4G36160.1
I
0.000
gene14869-v1.0-hybrid
Fragaria vesca
gene14869-v1.0-hybrid
I
0.000
gene21248-v1.0-hybrid
Fragaria vesca
gene21248-v1.0-hybrid
I
0.000
gene32254-v1.0-hybrid
Fragaria vesca
gene32254-v1.0-hybrid
I
0.000
GLYMA01G37310
Glycine max
GLYMA01G37310
I
0.000
GLYMA04G13660
Glycine max
GLYMA04G13660
I
0.000
GLYMA05G04250
Glycine max
GLYMA05G04250
I
0.000
GLYMA06G47680
Glycine max
GLYMA06G47680
I
0.000
GLYMA09G36600
Glycine max
GLYMA09G36600
I
0.000
GLYMA11G03340
Glycine max
GLYMA11G03340
I
0.000
GLYMA11G07990
Glycine max
GLYMA11G07990
I
0.000
GLYMA12G00760
Glycine max
GLYMA12G00760
I
0.000
GLYMA16G24200
Glycine max
GLYMA16G24200
I
0.000
GLYMA17G14700
Glycine max
GLYMA17G14700
I
0.000
Gorai.001G048200
Gossypium raimondii
Gorai.001G048200
I
0.000
Gorai.003G010700
Gossypium raimondii
Gorai.003G010700
I
0.000
Gorai.003G114100
Gossypium raimondii
Gorai.003G114100
I
0.000
Gorai.003G169000
Gossypium raimondii
Gorai.003G169000
I
0.000
Gorai.004G201100
Gossypium raimondii
Gorai.004G201100
I
0.000
Gorai.007G048000
Gossypium raimondii
Gorai.007G048000
I
0.000
Gorai.007G196400
Gossypium raimondii
Gorai.007G196400
I
0.000
Gorai.008G063600
Gossypium raimondii
Gorai.008G063600
I
0.000
Gorai.008G236400
Gossypium raimondii
Gorai.008G236400
I
0.000
GRMZM2G025642
Zea mays
GRMZM2G025642
I
0.000
GRMZM2G041668
Zea mays
GRMZM2G041668
I
0.000
GRMZM2G048826
Zea mays
GRMZM2G048826
N
0.000
GRMZM2G178998
Zea mays
GRMZM2G178998
I
0.000
GRMZM2G315140
Zea mays
GRMZM2G315140
I
0.000
GRMZM2G354151
Zea mays
GRMZM2G354151
I
0.000
GRMZM2G440219
Zea mays
GRMZM2G440219
I
0.000
GRMZM2G479980
Zea mays
GRMZM2G479980
N
0.000
GSMUA_Achr11G03040_001
Musa acuminata
GSMUA_Achr11G03040_001
I
0.000
GSMUA_Achr11G03780_001
Musa acuminata
GSMUA_Achr11G03780_001
I
0.000
GSMUA_Achr11G17510_001
Musa acuminata
GSMUA_Achr11G17510_001
I
0.000
GSMUA_Achr3G22360_001
Musa acuminata
GSMUA_Achr3G22360_001
N
0.000
GSMUA_Achr6G36840_001
Musa acuminata
GSMUA_Achr6G36840_001
I
0.000
GSMUA_Achr7G06640_001
Musa acuminata
GSMUA_Achr7G06640_001
I
0.000
GSMUA_Achr8G11590_001
Musa acuminata
GSMUA_Achr8G11590_001
I
0.000
GSMUA_Achr8G12100_001
Musa acuminata
GSMUA_Achr8G12100_001
I
0.000
LjSGA_013013.1
Lotus japonicus
LjSGA_013013.1
I
0.000
LjSGA_069569.1
Lotus japonicus
LjSGA_069569.1
I
0.000
LPERR02G21010
Leersia perrieri
LPERR02G21010
I
0.000
LPERR03G01990
Leersia perrieri
LPERR03G01990
I
0.000
LPERR04G16200
Leersia perrieri
LPERR04G16200
I
0.000
LPERR06G00240
Leersia perrieri
LPERR06G00240
I
0.000
LPERR08G00380
Leersia perrieri
LPERR08G00380
N
0.000
Lus10024601.g
Linum usitatissimum
Lus10024601.g
I
0.000
Lus10028372.g
Linum usitatissimum
Lus10028372.g
I
0.000
Lus10031142.g
Linum usitatissimum
Lus10031142.g
I
0.000
Lus10031721.g
Linum usitatissimum
Lus10031721.g
I
0.000
Lus10032238.g
Linum usitatissimum
Lus10032238.g
I
0.000
Lus10041822.g
Linum usitatissimum
Lus10041822.g
I
0.000
MDP0000131126
Malus domestica
MDP0000131126
I
0.000
MDP0000136180
Malus domestica
MDP0000136180
I
0.000
MDP0000176447
Malus domestica
MDP0000176447
I
0.000
MDP0000221977
Malus domestica
MDP0000221977
I
0.000
MDP0000226701
Malus domestica
MDP0000226701
I
0.000
MDP0000246470
Malus domestica
MDP0000246470
I
0.000
MDP0000254112
Malus domestica
MDP0000254112
I
0.000
MDP0000298965
Malus domestica
MDP0000298965
I
0.000
MDP0000299959
Malus domestica
MDP0000299959
I
0.000
MDP0000320566
Malus domestica
MDP0000320566
I
0.000
mgf020336m
Mimulus guttatus
mgf020336m
I
0.000
mgf021916m
Mimulus guttatus
mgf021916m
I
0.000
mgf022574m
Mimulus guttatus
mgf022574m
I
0.000
MLOC_15746
Hordeum vulgare
MLOC_15746
I
0.000
MLOC_53086
Hordeum vulgare
MLOC_53086
I
0.000
MLOC_56103
Hordeum vulgare
MLOC_56103
I
0.000
MLOC_56769
Hordeum vulgare
MLOC_56769
I
0.000
MTR_4g036030
Medicago truncatula
MTR_4g036030
I
0.000
MTR_4g101680
Medicago truncatula
MTR_4g101680
I
0.000
MTR_5g012080
Medicago truncatula
MTR_5g012080
I
0.000
OB02G33070
Oryza brachyantha
OB02G33070
I
0.000
OB03G12100
Oryza brachyantha
OB03G12100
I
0.000
OB04G27030
Oryza brachyantha
OB04G27030
I
0.000
OB06G10310
Oryza brachyantha
OB06G10310
I
0.000
OB08G10370
Oryza brachyantha
OB08G10370
N
0.000
OB10G23740
Oryza brachyantha
OB10G23740
I
0.000
OBART02G25700
Oryza barthii
OBART02G25700
I
0.000
OBART03G02180
Oryza barthii
OBART03G02180
I
0.000
OBART04G20020
Oryza barthii
OBART04G20020
I
0.000
OBART06G00240
Oryza barthii
OBART06G00240
I
0.000
OBART10G16620
Oryza barthii
OBART10G16620
I
0.000
OGLUM02G26220
Oryza glumaepatula
OGLUM02G26220
I
0.000
OGLUM03G02130
Oryza glumaepatula
OGLUM03G02130
I
0.000
OGLUM04G19900
Oryza glumaepatula
OGLUM04G19900
I
0.000
OGLUM06G00210
Oryza glumaepatula
OGLUM06G00210
I
0.000
OGLUM08G00350
Oryza glumaepatula
OGLUM08G00350
N
0.000
OGLUM10G16690
Oryza glumaepatula
OGLUM10G16690
I
0.000
OLONG_011521
Oryza longistaminata
OLONG_011521
I
0.000
OLONG_016152
Oryza longistaminata
OLONG_016152
I
0.000
OLONG_018618
Oryza longistaminata
OLONG_018618
I
0.000
OMERI02G25220
Oryza meridionalis
OMERI02G25220
I
0.000
OMERI03G02020
Oryza meridionalis
OMERI03G02020
I
0.000
OMERI03G30800
Oryza meridionalis
OMERI03G30800
I
0.000
OMERI06G00230
Oryza meridionalis
OMERI06G00230
I
0.000
OMERI08G00600
Oryza meridionalis
OMERI08G00600
N
0.000
OMERI10G13220
Oryza meridionalis
OMERI10G13220
I
0.000
ONIVA02G28150
Oryza nivara
ONIVA02G28150
I
0.000
ONIVA03G01790
Oryza nivara
ONIVA03G01790
I
0.000
ONIVA04G18230
Oryza nivara
ONIVA04G18230
I
0.000
ONIVA06G00260
Oryza nivara
ONIVA06G00260
I
0.000
ONIVA10G18400
Oryza nivara
ONIVA10G18400
I
0.000
OPUNC02G23550
Oryza punctata
OPUNC02G23550
I
0.000
OPUNC03G01920
Oryza punctata
OPUNC03G01920
I
0.000
OPUNC04G17680
Oryza punctata
OPUNC04G17680
I
0.000
OPUNC06G00220
Oryza punctata
OPUNC06G00220
I
0.000
OPUNC08G00360
Oryza punctata
OPUNC08G00360
N
0.000
orange1.1g018596m.g
Citrus sinensis
orange1.1g018596m.g
I
0.000
orange1.1g020354m.g
Citrus sinensis
orange1.1g020354m.g
I
0.000
orange1.1g021187m.g
Citrus sinensis
orange1.1g021187m.g
I
0.000
ORGLA03G0019500
Oryza glaberrima
ORGLA03G0019500
I
0.000
ORGLA04G0171200
Oryza glaberrima
ORGLA04G0171200
I
0.000
ORGLA06G0002300
Oryza glaberrima
ORGLA06G0002300
I
0.000
ORUFI02G27110
Oryza rufipogon
ORUFI02G27110
I
0.000
ORUFI03G01920
Oryza rufipogon
ORUFI03G01920
I
0.000
ORUFI04G21580
Oryza rufipogon
ORUFI04G21580
I
0.000
ORUFI06G00250
Oryza rufipogon
ORUFI06G00250
I
0.000
ORUFI08G00330
Oryza rufipogon
ORUFI08G00330
N
0.000
ORUFI10G17730
Oryza rufipogon
ORUFI10G17730
I
0.000
OS02G0643600
Oryza sativa
OS02G0643600
I
0.000
OS04G0536500
Oryza sativa
OS04G0536500
I
0.000
OS06G0104200
Oryza sativa
OS06G0104200
I
0.000
OS08G0103900
Oryza sativa
OS08G0103900
N
0.000
OS10G0532000
Oryza sativa
OS10G0532000
I
0.000
Pavir.Da02426
Panicum virgatum
Pavir.Da02426
I
0.000
Pavir.Gb00744
Panicum virgatum
Pavir.Gb00744
I
0.000
Pavir.Ia02924
Panicum virgatum
Pavir.Ia02924
I
0.000
Pavir.Ib00161
Panicum virgatum
Pavir.Ib00161
I
0.000
Pavir.Ib02477
Panicum virgatum
Pavir.Ib02477
I
0.000
Pavir.J07126
Panicum virgatum
Pavir.J07126
I
0.000
Pavir.J09314
Panicum virgatum
Pavir.J09314
N
0.000
Pavir.J26987
Panicum virgatum
Pavir.J26987
I
0.000
Pavir.J32898
Panicum virgatum
Pavir.J32898
I
0.000
Pavir.J39804
Panicum virgatum
Pavir.J39804
I
0.000
PDK_20s1306451g001
Phoenix dactylifera
PDK_20s1306451g001
I
0.000
PDK_20s1423861g001
Phoenix dactylifera
PDK_20s1423861g001
N
0.000
PDK_20s1503311g001
Phoenix dactylifera
PDK_20s1503311g001
I
0.000
PGSC0003DMG400004740
Solanum tuberosum
PGSC0003DMG400004740
I
0.000
PGSC0003DMG400021576
Solanum tuberosum
PGSC0003DMG400021576
I
0.000
PGSC0003DMG400026079
Solanum tuberosum
PGSC0003DMG400026079
I
0.000
PGSC0003DMG401003552
Solanum tuberosum
PGSC0003DMG401003552
I
0.000
PK11173.1
Cannabis sativa
PK11173.1
I
0.000
PK23416.1
Cannabis sativa
PK23416.1
I
0.000
PK28510.1
Cannabis sativa
PK28510.1
I
0.000
Pm019488
Prunus mume
Pm019488
I
0.000
Pm019490
Prunus mume
Pm019490
I
0.000
Pm023559
Prunus mume
Pm023559
I
0.000
Pm026735
Prunus mume
Pm026735
I
0.000
POPTR_0001s00220
Populus trichocarpa
POPTR_0001s00220
I
0.000
POPTR_0003s11250
Populus trichocarpa
POPTR_0003s11250
I
0.000
POPTR_0005s11870
Populus trichocarpa
POPTR_0005s11870
I
0.000
POPTR_0007s13910
Populus trichocarpa
POPTR_0007s13910
I
0.000
POPTR_0012s14660
Populus trichocarpa
POPTR_0012s14660
I
0.000
POPTR_0015s14770
Populus trichocarpa
POPTR_0015s14770
I
0.000
PRUPE_ppa015786mg
Prunus persica
PRUPE_ppa015786mg
I
0.000
PRUPE_ppa020139mg
Prunus persica
PRUPE_ppa020139mg
I
0.000
PRUPE_ppa022264mg
Prunus persica
PRUPE_ppa022264mg
I
0.000
SapurV1A.0129s0210
Salix purpurea
SapurV1A.0129s0210
I
0.000
SapurV1A.0166s0460
Salix purpurea
SapurV1A.0166s0460
I
0.000
SapurV1A.0367s0210
Salix purpurea
SapurV1A.0367s0210
I
0.000
SapurV1A.0487s0230
Salix purpurea
SapurV1A.0487s0230
I
0.000
SapurV1A.0634s0120
Salix purpurea
SapurV1A.0634s0120
I
0.000
SapurV1A.1275s0070
Salix purpurea
SapurV1A.1275s0070
I
0.000
SapurV1A.3982s0010
Salix purpurea
SapurV1A.3982s0010
I
0.000
Sb01g030760
Sorghum bicolor
Sb01g030760
I
0.000
Sb01g048730
Sorghum bicolor
Sb01g048730
I
0.000
Sb02g002620
Sorghum bicolor
Sb02g002620
N
0.000
Sb04g033570
Sorghum bicolor
Sb04g033570
I
0.000
Sb06g023780
Sorghum bicolor
Sb06g023780
I
0.000
Sb06g034010
Sorghum bicolor
Sb06g034010
N
0.000
Sb07g000470
Sorghum bicolor
Sb07g000470
N
0.000
Sb10g000460
Sorghum bicolor
Sb10g000460
I
0.000
SELMODRAFT_100973
Selaginella moellendorffii
SELMODRAFT_100973
I
0.000
SELMODRAFT_402243
Selaginella moellendorffii
SELMODRAFT_402243
I
0.000
SELMODRAFT_408624
Selaginella moellendorffii
SELMODRAFT_408624
I
0.000
SELMODRAFT_451784
Selaginella moellendorffii
SELMODRAFT_451784
I
0.000
SELMODRAFT_57388
Selaginella moellendorffii
SELMODRAFT_57388
I
0.000
SELMODRAFT_71405
Selaginella moellendorffii
SELMODRAFT_71405
I
0.000
Si006829m.g
Setaria italica
Si006829m.g
I
0.000
Si010504m.g
Setaria italica
Si010504m.g
I
0.000
Si017679m.g
Setaria italica
Si017679m.g
I
0.000
Si036363m.g
Setaria italica
Si036363m.g
I
0.000
Si039467m.g
Setaria italica
Si039467m.g
I
0.000
Solyc02g084350.2
Solanum lycopersicum
Solyc02g084350.2
I
0.000
Solyc06g034340.1
Solanum lycopersicum
Solyc06g034340.1
I
0.000
Solyc06g065410.2
Solanum lycopersicum
Solyc06g065410.2
I
0.000
Solyc08g079120.1
Solanum lycopersicum
Solyc08g079120.1
I
0.000
TCM_000235
Theobroma cacao
TCM_000235
I
0.000
TCM_014939
Theobroma cacao
TCM_014939
I
0.000
TCM_016035
Theobroma cacao
TCM_016035
I
0.000
Thhalv10007823m.g
Eutrema salsugineum
Thhalv10007823m.g
I
0.000
Thhalv10022756m.g
Eutrema salsugineum
Thhalv10022756m.g
I
0.000
Thhalv10025510m.g
Eutrema salsugineum
Thhalv10025510m.g
I
0.000
Traes_2AL_82C3E7E14
Triticum aestivum
Traes_2AL_82C3E7E14
I
0.000
Traes_2BL_24E6E8DF9
Triticum aestivum
Traes_2BL_24E6E8DF9
I
0.000
Traes_2DL_343FA6101
Triticum aestivum
Traes_2DL_343FA6101
I
0.000
Traes_4AL_F853C8660
Triticum aestivum
Traes_4AL_F853C8660
I
0.000
Traes_4BL_03B8EA3BF
Triticum aestivum
Traes_4BL_03B8EA3BF
I
0.000
Traes_4DL_54E14ABCB
Triticum aestivum
Traes_4DL_54E14ABCB
I
0.000
Traes_6AL_BB7207AD1
Triticum aestivum
Traes_6AL_BB7207AD1
I
0.000
Traes_6BL_8F77BF933
Triticum aestivum
Traes_6BL_8F77BF933
I
0.000
Traes_6DL_D0BE06357
Triticum aestivum
Traes_6DL_D0BE06357
I
0.000
Traes_7AS_6398221B7
Triticum aestivum
Traes_7AS_6398221B7
I
0.000
Traes_7DS_7F0AF83B0
Triticum aestivum
Traes_7DS_7F0AF83B0
I
0.000
TRIUR3_08851
Triticum urartu
TRIUR3_08851
I
0.000
TRIUR3_20707
Triticum urartu
TRIUR3_20707
I
0.000
VIT_02s0154g00020
Vitis vinifera
VIT_02s0154g00020
I
0.000
ANAC076
Vitis vinifera
VIT_04s0023g03110
I
0.000
VIT_16s0022g00690
Vitis vinifera
VIT_16s0022g00690
I
0.000